cluster # 4199

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Schistosoma mansoni
cluster # 4199 cluster # 4199 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4199#0 length = 652 sequences # 3

consensusID : consensus_4199#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 652
fasta sequence

                              [CTCGAGGCTCGAATCCGTGCAAGTATGGAGGCCATTCGTTCGACGTTAGTTAATAGTTTTCGAGATGAATTGGCAACTGTTCTGGCTGAGAATGTCAATTTACGTTCAGAAATAACTCGATTAAACTCCGAGTTAACGCTTATTCGAAGTTATCAACATGCCTTCTTTGCTATTCGACCATTTGTCCCACCTGGCTTGTGGGAAAATATTTGTGTTCAACAGGGGTTACCTGTATCATCTTTTGGGAATGATTCAGAGTACCAATCACCTTTTAACCCCCAGGTTTCCC-GGTAAACAAATTATGAAAACTCATAGTAAATCTTCATCGCTATCAAACGAAGAGCGTTTTTCTGTTATTTTCCATGAATCAACAGTGCAATAGTTATTTTCACGGCGATTTTGGCCGCCAAAATCTTGATCTCACTGCTATAAAAACATACGGAAAACGTTTTATCAAGTTGATTTGCTTACTTTACAAGATTTTTCACGTTTCTACCGACTATATTTTCGTTTCTCGTTTTTTTAAATGTTATTCAGTTATCTTGAGATGATCGTTTTGTTCTTTGAGATCTGCAAACAAGTATTTATCTACCATAACAACTAACGATAACCTACACCTTCGACTCTGTTCTACTTCTCTTTTTATGTTAAC]

[+] EMBL CD202201             [CTCGAGGCTCGAATCCGTGCAAGTATGGAGGCCATTCGTTCGACGTTAGTTAATAGTTTTCGAGATGAATTGGCAACTGTTCTGGCTGAGAATGTCAATTTACGTTCAGAAATAACTCGATTAAACTCCGAGTTAACGCTTATTCGAAGTTATCAACATGCCTTCTTTGCTATTCGACCATTTGTCCCACCTGGCTTGTGGGAAAATATTTGTGTTCAACAGGGGTTACCTGTATCATCTTTTGGGAATGATTCAGAGTACCAATCACCTTTTAACCCCCAGGTTTCCC GGTAAACAAATTATGAAAACTCATAGTAAATCTTCATCGCTATCAAACGAAGAGCGTTTTTCTGTTATTTTCCATGAATCAACAGTGCA                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD125637             [                                                                                                      CGTTCAGAAATAACTCGATTAAACTCCGAGTTAACGCTTATTCGAAGTTATCAACATGCCTTCTTTGCTATTCGACCATTTGTCCCACCTGGCTTGTGGGAAAATATTTGTGTTCAACAGGGGTTACCTGTATCATCTTTTGGGAATGATTCAGAGTACCAATCACCTTTTAACCCCCAGGTTTCCCACGTAACCAAATTAGGGAAAATAATAGTAAATCTTCATCGCTATCAAn                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD133025             [                                                                                                                                                                                                                                                                                                    TAAACAAATTATGAANACTCATAGTAAATCTTCATCGCTATCAAACGAAGAGCGTTTTTCTGTTATTTTCCATGAATCAACAGTGCAATAGTTATTTTCACGGCGATTTTGGCCGCCAAAATCTTGATCTCACTGCTATAAAAACATACGGAAAACGTTTTATCAAGTTGATTTGCTTACTTTACAAGATTTTTCACGTTTCTACCGACTATATTTTCGTTTCTCGTTTTTTTAAATGTTATTCAGTTATCTTGAGATGATCGTTTTGTTCTTTGAGATCTGCAAACAAGTATTTATCTACCATAACAACTAACGATAACCTACACCTTCGACTCTGTTCTACTTCTCTTTTTATGTTAAC]




>consensus_4199#0
CTCGAGGCTCGAATCCGTGCAAGTATGGAGGCCATTCGTTCGACGTTAGTTAATAGTTTT
CGAGATGAATTGGCAACTGTTCTGGCTGAGAATGTCAATTTACGTTCAGAAATAACTCGA
TTAAACTCCGAGTTAACGCTTATTCGAAGTTATCAACATGCCTTCTTTGCTATTCGACCA
TTTGTCCCACCTGGCTTGTGGGAAAATATTTGTGTTCAACAGGGGTTACCTGTATCATCT
TTTGGGAATGATTCAGAGTACCAATCACCTTTTAACCCCCAGGTTTCCCGGTAAACAAAT
TATGAAAACTCATAGTAAATCTTCATCGCTATCAAACGAAGAGCGTTTTTCTGTTATTTT
CCATGAATCAACAGTGCAATAGTTATTTTCACGGCGATTTTGGCCGCCAAAATCTTGATC
TCACTGCTATAAAAACATACGGAAAACGTTTTATCAAGTTGATTTGCTTACTTTACAAGA
TTTTTCACGTTTCTACCGACTATATTTTCGTTTCTCGTTTTTTTAAATGTTATTCAGTTA
TCTTGAGATGATCGTTTTGTTCTTTGAGATCTGCAAACAAGTATTTATCTACCATAACAA
CTAACGATAACCTACACCTTCGACTCTGTTCTACTTCTCTTTTTATGTTAAC

clustalw multiple alignements is not computed in this case