cluster # 4220

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Schistosoma mansoni
cluster # 4220 cluster # 4220 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4220#0 length = 610 sequences # 3

consensusID : consensus_4220#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 610
fasta sequence

                              [CCGTTCTGGATCAGAAGATATCATTCCATGTGACCCAAAGGTCGGTGAAGGTTCTATAGTAACTTCACTTTCTCTTTTTAGTCCAGGACAAAATTTGGTTCGAAGTAAAAGTTGATAGAAAACGTTGGAAGGAATTGAGACTATTTTGTTTATTGGTTCGGGAAAAAGTCTGGCGAATGCGAATGATGGACGATAATCACCTCTCCTTCCTTGAGGATGACGTTGTAGAAAGCGAAGGTAGCACCAACTACACAGAATTCCATAACAAAACAGGATAACGGAAGAGAGCCTGATAAACCCTACTACCAACAAACATAAAAATGTGATCGACATAGCTGGAAGACCATACTGAGATTTAAAGTTGAAACCCTTGATATTTACAAGTGATTGATCCGTACTTAATTGGTTTAGAACTACGAGTACAGAAGACAAAAATGCAGAATTCCCATTGATCCGTTTGAATGAATTGTTATTATCAAGAAAAATCGCTGGGAGAACCGCAAACATTCCGGCGCTTGTATTTACAAACCAATAGTAGAATAGTATTTCGACGTTGCTCCATACATGAAATACAAGCTNTGTATAGATAAAAATGGNCAGGATTGTAAAA]

[-] EMBL CD066441             [CCGTTCTGGATCAGAAGATATCATTCCATGTGACCCAAAGGTCGGTGAAGGTTCTATAGTAACTTCACTTTCTCTTTTTAGTCCAGGACAAAATTTGGTTCGAAGTAAAAGTTGATAGAAAACGTTGGAAGGAATTGAGACTATTTTGTTTATTGGTTCGGGAAAAAGTCTGGCGAATGCGAATGATGGACGATAATCACCTCTCCTTCCTTGAGGATGACGTTGTAGAAAGCGAAGGTAGCACCAACTACACAGAATTCCATAACAAAACAGGATAACGGAAGAGAGCCTGATAAACCCTACTACCAACAAACATAAAAATGTGATCGACATAGCTGGAAGACCATACTGAGATTTAA                                                                                                                                                                                                                                                           ]
[+] EMBL CD187749             [                                                                                                                                                                                      ATGATGGACGATAATCACCTCTCCTTCCTTGAGGATGACGTTGTAGAAAGCGAAGGTAGCACCAACTACACAGAATTCCATAACAAAACAGGATAACGGAAGAGAGCCTGATAAACCCTACTACCAACAAACATAAAAATGTGATCGACATAGCTGGAAGACCATACTGAGATTTAAAGTTGAAACCCTTGATATTTACAAGTGATTGATCCGTACTTAATTGGTTTAGAACTACGAGTACAGAAGACAAAAATGCAGAATTCCCATTGATCCGTTTGAATGAATTGTTATTATCAAGAAAAATCGCTGGGAGAACCGCAAACATTCCGGCGCTTGTATTTACAAACCAATAGTAGAATAGTATTTCGACGTTGCTCCATACATGAAATACAAGCTNTGTATAGATAAAAATGGNCAGGATTGTAAAA]
[+] EMBL CD187713             [                                                                                                                                                                                      ATGATGGACGATAATCACCTCTCCTTCCTTGAGGATGACGTTGTAGAAAGCGAAGGTAGCACCAACTACACAGAATTCCATAACAAAACAGGATAACGGAAGAGAGCCTGATAAACCCTACTACCAACAAACATAAAAATGTGATCGACATAGCTGGAAGACCATACTGAGATTTAAAGTTGAAACCCTTGATATTTACAAGTGATTGATCCGTACTTAATTGGTTTAGAACTACGAGTACAGAAGACAAAAATGCAGAATTCCCATTGATCCGTTTGAATGAATTGTTATTATCAAGAAAAATCGCTGGGAGAACCGCANACATTCCGGCGCTTGTATTTACAAACCAATAGTAGAATAGTATTTCGACGTTGCTCCATACATGAAATACAAGCTTTGTATAGATAAAAATGGCAAGGAT       ]




>consensus_4220#0
CCGTTCTGGATCAGAAGATATCATTCCATGTGACCCAAAGGTCGGTGAAGGTTCTATAGT
AACTTCACTTTCTCTTTTTAGTCCAGGACAAAATTTGGTTCGAAGTAAAAGTTGATAGAA
AACGTTGGAAGGAATTGAGACTATTTTGTTTATTGGTTCGGGAAAAAGTCTGGCGAATGC
GAATGATGGACGATAATCACCTCTCCTTCCTTGAGGATGACGTTGTAGAAAGCGAAGGTA
GCACCAACTACACAGAATTCCATAACAAAACAGGATAACGGAAGAGAGCCTGATAAACCC
TACTACCAACAAACATAAAAATGTGATCGACATAGCTGGAAGACCATACTGAGATTTAAA
GTTGAAACCCTTGATATTTACAAGTGATTGATCCGTACTTAATTGGTTTAGAACTACGAG
TACAGAAGACAAAAATGCAGAATTCCCATTGATCCGTTTGAATGAATTGTTATTATCAAG
AAAAATCGCTGGGAGAACCGCAAACATTCCGGCGCTTGTATTTACAAACCAATAGTAGAA
TAGTATTTCGACGTTGCTCCATACATGAAATACAAGCTNTGTATAGATAAAAATGGNCAG
GATTGTAAAA

clustalw multiple alignements is not computed in this case