cluster # 4540

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Schistosoma mansoni
cluster # 4540 cluster # 4540 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4540#0 length = 508 sequences # 3

consensusID : consensus_4540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 508
fasta sequence

                              [TTCGTCAGCCA-TAAACGTCAACAAC-AATTAAATCATTAAAGC-AAATCGTAGTAACAAGAAAAACACCTTATGCATAGTTAAAGAAAATAACTAAAATATAACTCAATAAAAAGGAGAACCAAAACGACAAAATGGAATGATTTGAAATGTTTAACAAAATGACGATGACGATAACGACAATGCTATGCAAGATGTATTCAGTTAATCTTAAGAAAAGTTTGTTTTACACTTTTTCATTTCATTTGTAATCTGATGTATATTTACCAATTGATTACGTATAGGCATATTTTTGTAGGGACTTTGTGTCATCACTTTTTGAAAACGATGGTAGTGTTGAATAAGTTGAGCAAGTAAACCCTGAAATATTTGTGTCCCTAAGGTAAAATTGGCAAACTCCATCATGATTTCATCATGTATCTTTTCAATCGAATTCTTCCAATCAATATTGAATCCCTTCACTATTCGTGTTACCCGAGCTTCCTCGCTACGAATATTTTGGGTCAATTCA]

[+] EMBL CD200639             [TTCGTCAGCCA TAAACGTCAACAAC AATTAAATCATTAAAGC AAATCGTAGTAACAAGAAAAACACCTTATGCATAGTTAAAGAAAATAACTAAAATATAACTCAATAAAAAGGAGAACCAAAACGACAAAATGGAATGATTTGAAATGTTTAACAAAATGACGATGACGATAACGACAATGCTATGCAAGATGTATTCAGTTAATCTTAAGAAAAGTTTGTTTTACACTTTTTCATTTCATTTGTAATCTGATGTATATTTACCAATTGATTACGTATAGGCATATTTTTGTAGGGACTTTGTGTCATCACTTTTTGAAAACGATGGTAGTGTTGAATAAGTTGAGCAAGTAAACCCTGAAATATTTGTGTCCCTAAGGTAAAATTGGCAAACTCCATCATGATTTCATCATGTATCTTTTCAATCGAATTCTTCCAATCAATATTGAATCCCTTCACTATTCGTGTTACCCGAGCTTCCTCGCTACGAATATTTTGGGTCAATTCA]
[+] EMBL CD200492             [TTCGTCAGCCA TAAACGTCAACAAC AATTAAATCATTAAAGC AAATCGTAGTAACAAGAAAAACACCTTATGCATAGTTAAAGAAAATAACTAAAATATAACTCAGTACAAAGGAGAACCAAAACGACAAAATGGAATGATTTGAAATGTTTAACAAAATGACGATGA                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD200802             [  tGTTAGCCATTGACCGTCGGCAGCGAATT AATCATTAAAGCAAAATTGTAGTAACAAGAAAAACGCCTTATGCATAGTTAAAGAGAATACCTAAAATATAACTCAATAAAAAGGAGGACCAAAACGACAAAATGGAATGATTTGAAATGTTTAACAAAATGATGATGACGATAACGACAATGGTATGCAAGATGTATTCAGTTAATCTTAAGAAAAGTTTGTTTTACACTTTTTCATTTCATTTGTAATCTGATGTATATTTACCAATTGATTACGTATAGGCATATTTTTGTAGGGACTTTGTGTCATCACTTTTTGAAAACGATGGTAGTGTTGAATAAGTTGAGCAAGTAAACCCTGAAATATTTGTGTCCCTAAGGTAAAATTGGCAAACCCCCTCAAGATTTCATCATGTATCTTTTCAAAAGAATTTTTTCAATCAATATTGAATCCCTTCACTATTTGTGTTACCCGAGCTTCCTCGCTACGAATATTTTGGGTC      ]




>consensus_4540#0
TTCGTCAGCCATAAACGTCAACAACAATTAAATCATTAAAGCAAATCGTAGTAACAAGAA
AAACACCTTATGCATAGTTAAAGAAAATAACTAAAATATAACTCAATAAAAAGGAGAACC
AAAACGACAAAATGGAATGATTTGAAATGTTTAACAAAATGACGATGACGATAACGACAA
TGCTATGCAAGATGTATTCAGTTAATCTTAAGAAAAGTTTGTTTTACACTTTTTCATTTC
ATTTGTAATCTGATGTATATTTACCAATTGATTACGTATAGGCATATTTTTGTAGGGACT
TTGTGTCATCACTTTTTGAAAACGATGGTAGTGTTGAATAAGTTGAGCAAGTAAACCCTG
AAATATTTGTGTCCCTAAGGTAAAATTGGCAAACTCCATCATGATTTCATCATGTATCTT
TTCAATCGAATTCTTCCAATCAATATTGAATCCCTTCACTATTCGTGTTACCCGAGCTTC
CTCGCTACGAATATTTTGGGTCAATTCA

clustalw multiple alignements is not computed in this case