Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5798 cluster # 5798       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5798#0 length = 930 sequences # 3  
consensusID : consensus_5798#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 930
fasta sequence 
                              [CAAATGCTTCTATTTACAAATCTTTATTTACAATATCTTTTTCAAGGTATTTTGCAACTAATTCAATAACATCAGGTTTCATGAATACATCTACAATCTGTTCGAAGTTAGGAGTATTAACAATATCAGATGTGGAATTTTCTCCTGAAATAGCAAATAAACTGTTTAGCTTTTCTGAAGTTAAGGGTGTCCAATTGATAATATTAGAAAATCTAGCTTGTTTTGGAGGTTCTTCTAGATTTTCTTCTTCTTTGGAAGATGATTTATTTGAATTTTGATGAAAAAGTATTTGTAGATAATCCAATAGTTTTTTAAACCAAAACTTATTTTCATATGTTACTTGTTCAGATGGATGTAATAAAACTTTATGATCACTATGATCATAATTAGATAACAAAGAGAAGCCGACTAATTGTGTGAGACATTCTCTAAGGCGTACTTTATTATCAAGTGAAGGTTGGTCAATCCATAAGTTTACTGAACAAGTAAAATCATATTCAGATGATGATTCAACAAAATGCCACCAATTTCTTGGGACAAAAAGAAGATCTCCAGGATAAAGTGTTATAGGATAAGGAGTTGTTTTTAGTATGAGAGGATGTTTTTTGCAGTTGGGTAATGTGAAATTAACTTTGCTAAAAACAGTAGATTCTTCT-AAGGCAATCGAGTTTCATACATATATGGGTTATCCGAAGGTGGAAATAATATCCAGCGTTTGGATCCTTTGATTTGTACAACCAGATTAACTCCGTAAGTATCTCGATGACAAATAGTATGAGCTTTAGACGATCCAAGCCAAAATGTTGGACTGATATTACTTTTTAGGAACGGGAACAATTCTTGAAATGATAAATCTTCGACTAAACCTGAAAGTCAGGTGATTGATTCATACATATGTAATCAGCCCCTCGTGCCGAATTTTTGGCCTCG]

[+] EMBL CD074498             [CAAATGCTTCTATTTACAAATCTTTATTTACAATATCTTTTTCAAGGTATTTTGCAACTAATTCAATAACATCAGGTTTCATGAATACATCTACAATCTGTTCGAAGTTAGGAGTATTAACAATATCAGATGTGGAATTTTCTCCTGAAATAGCAAATAAACTGTTTAGCTTTTCTGAAGTTAAGGGTGTCCAATTGATAATATTAGAAAATCTAGCTTGTTTTGGAGGTTCTTCTAGATTTTCTTCTTCTTTGGAAGATGATTTATTTGAATTTTGATGAAAAAGTATTTGTAGATAATCCAATAGTTTTTTAAACCAAAACTTATTTTCATATGTTACTTGTTCAGATGGATGTAATAAAACTTTATGATCACTATGATCATAATTAGATAACAAAGAGAAGCCGACTAATTGTGTGAGACATTCTCTAAGGCGTACTTTATTATCAAGTGAAGGTTGGTCAATCCATAAGTTTACTGAACAAGTAAAATCATATTCAGATGATGATTCAACAAAATGCCACCAATTTCTTGGGACAAAAAGAAGATCTCCAGGATAAAGTGTTATAGGATAAGGAGTTGTTTTTAGTATGAGAGGATGTTTTTTGCAGTTGGGTAATGTGAAATTAACTTTGCTAAAAACAGTAGATTCTTCT AAGGCAATCGAGTTTCATACATATA                                                                                                                                                                                                                                                         ]
[+] EMBL CD074321             [CAAATGCTTCTATTTACAAATCTTTATTTACAATATCTTTTTCAAGGTATTTTGCAACTAATTCAATAACATCAGGTTTCATGAATACATCTACAATCTGTTCGAAGTTAGGAGTATTAACAATATCAGATGTGGAATTTTCTCCTGAAATAGCAAATAAACTGTTTAGCTTTTCTGAAGTTAAGGGTGTCCAATTGATAATATTAGAAAATCTAGCTTGTTTTGGAGGTTCTTCTAGATTTTCTTCTTCTTTGGAAGATGATTTATTTGAATTTTGATGAAAAAGTATTTGTAGATAATCCAATAGTTTTTTAAACCAAAACTTATTTTCATATGTTACTTGTTCAGATGGATGTAATAAAACTTTATGATCACTATGATCATAATTAGATAACAAAGAGAAGCCGACTAATTGTGTGAGACATTCTCTAAGGCGTACTTTATTATCAAGTGAAGGTTGGTCAATCCATAAGTTTACTGAACAAGTAAAATCATATTCAGATGATGATTCAACAAAATGCCACCAATTTCTTGGGACAAAAAGAAGATCTCCAGGATAAAGTGTTATAGGATAAGGAGTTGTTTTTAGTATGAGAGGATGTTTTTTGCAGTTGGGTAATGTGAAATTAACTNTGCTAAAAACAGT                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD080406             [                                                                                                                                                                                                                                                             GGAAGATGATTTATTTGAATTTTGATGAAAAAGTATTTGTAGATAATCCAATAGTTTTTTAAACCAAAACTTATTTTCATATGTTACTTGTTCAGATGGATGTAATAAAACTTTATGATCACTATGATCATAATTAGATAACAAAGAGAAGCCGACTAATTGTGTGAGACATTCTCTAAGGCGTACTTTATTATCAAGTGAAGGTTGGTCAATCCATAAGTTTACTGAACAAGTAAAATCATATTCAGATGATGATTCAACAAAATGCCACCAATTTCTTGGGACAAAAAGAAGATCTCCAGGATAAAGTGTTATAGGATAAGGAGTTGTTTTTAGTATGAGAGGATGTTTTTTGCAGTTGGGTAATGTGAAATTAACTTTGCTAAAAACAGTAGATTCTTCTAAAGGCAATCGAGTTTCATACATATATGGGTTATCCGAAGGTGGAAATAATATCCAGCGTTTGGATCCTTTGATTTGTACAACCAGATTAACTCCGTAAGTATCTCGATGACAAATAGTATGAGCTTTAGACGATCCAAGCCAAAATGTTGGACTGATATTACTTTTTAGGAACGGGAACAATTCTTGAAATGATAAATCTTCGACTAAACCTGAAAGTCAGGTGATTGATTCATACATATGTAATCAGCCCCTCGTGCCGAATTTTTGGCCTCG]




>consensus_5798#0
CAAATGCTTCTATTTACAAATCTTTATTTACAATATCTTTTTCAAGGTATTTTGCAACTA
ATTCAATAACATCAGGTTTCATGAATACATCTACAATCTGTTCGAAGTTAGGAGTATTAA
CAATATCAGATGTGGAATTTTCTCCTGAAATAGCAAATAAACTGTTTAGCTTTTCTGAAG
TTAAGGGTGTCCAATTGATAATATTAGAAAATCTAGCTTGTTTTGGAGGTTCTTCTAGAT
TTTCTTCTTCTTTGGAAGATGATTTATTTGAATTTTGATGAAAAAGTATTTGTAGATAAT
CCAATAGTTTTTTAAACCAAAACTTATTTTCATATGTTACTTGTTCAGATGGATGTAATA
AAACTTTATGATCACTATGATCATAATTAGATAACAAAGAGAAGCCGACTAATTGTGTGA
GACATTCTCTAAGGCGTACTTTATTATCAAGTGAAGGTTGGTCAATCCATAAGTTTACTG
AACAAGTAAAATCATATTCAGATGATGATTCAACAAAATGCCACCAATTTCTTGGGACAA
AAAGAAGATCTCCAGGATAAAGTGTTATAGGATAAGGAGTTGTTTTTAGTATGAGAGGAT
GTTTTTTGCAGTTGGGTAATGTGAAATTAACTTTGCTAAAAACAGTAGATTCTTCTAAGG
CAATCGAGTTTCATACATATATGGGTTATCCGAAGGTGGAAATAATATCCAGCGTTTGGA
TCCTTTGATTTGTACAACCAGATTAACTCCGTAAGTATCTCGATGACAAATAGTATGAGC
TTTAGACGATCCAAGCCAAAATGTTGGACTGATATTACTTTTTAGGAACGGGAACAATTC
TTGAAATGATAAATCTTCGACTAAACCTGAAAGTCAGGTGATTGATTCATACATATGTAA
TCAGCCCCTCGTGCCGAATTTTTGGCCTCG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)