cluster # 5812

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Schistosoma mansoni
cluster # 5812 cluster # 5812 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5812#0 length = 485 sequences # 3

consensusID : consensus_5812#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 485
fasta sequence

                              [TTCATCTTTGAATAGTCCAGGAGTTGAACTAGTGAGATAATGAAACTAGAAATAATTCAGTCAATGACTTTGAAATGGATGGGATTTGATTATAAAGGTCTGCAAGATATATATTCAGTGCTCAATACACAGATTCTCATGAAGCATTTTTCAGATCACTTAAGTGTTTT-TGGTCATATTG-AACTCTTTTTCAACG-TTTACAATATTGATCAGGATGACAAAAATATTTTACTAATATTTTATCATACTACTACAACTATTTGTCTGAACACCGATAAGCAATTATCCTGTTTTAAATAACTAATATTTCAGAATCATCATATGTATTCTGAATCTCTCCTAATTCATTT-GTTCTACATTATTGTCTAATAATTTCTATCCTTGAAATGAACTATGAAACATTCATT-GATCTCATTTAAATCACAAATTGACAGTCATAAAACTTTATTTAGCAAGGATTCACTTCAGNGGTTTTTATAAGACAA]

[+] EMBL CD197599             [TTCATCTTTGAATAGTCCAGGAGTTGAACTAGTGAGATAATGAAACTAGAAATAATTCAGTCAATGACTTTGAAATGGATGGGATTTGATTATAAAGGTCTGCAAGATATATATTCAGTGCTCAATACACAGATTCTCATGAAGCATTTTTCAGATCACTTAAGTGTTTT TGGTCATATTG AACTCTTTTTCAACG TTTACAATATTGATCAGGATGACAAAAATATTTTACTAATATTTTATCATACTACTACAACTATTTGTCTGAACACCGATAAGCAATTATCCTGTTTTAAATAACTAATATTTCAGAATCATCATATGTATTCTGAATCTCTCCTAATTCATTT GTTCTACATTATTGTCTAATAATTTCTATCCTTGAAATGAACTATGAAACATTCATT GATCTCATTTAAATCACAAATTGACAGTCATAAAACTTTATT                                    ]
[-] EMBL CD135869             [                                              TAGAAATAATTCAGTCAATGACTTTGAAATGGATGGGATTTGATTATAAAGGTCTGCAAGATAAATATTCAGTGCTCAATACACAGATTCTCATGAAGCATTTTTCAGATCACTTAAGTGTTTT TGGTCATATTG AACTCTTTTTCAACG TTTACAATATTGATCAGGATGACAAAAATATTTTACTAATATTTTATCATACTACTACAACTATTTGTCTGAACACCGATAAGCAATTATCCTGTTTTAAATAACTAATATTTCAGAATCATCATATGTAT                                                                                                                                                                ]
[+] EMBL SM875                [                                                                                                                                                                    TGTTTTGGGGTCATATTGNAACTCTTTTTCAACGNTTTACAATATTGATCAGGATGACAAAAATATTTTACTAATATTTTATCATACTACTACAACTATTTGNCTGAACACCGATAAGCAATTATCCTGTTTTAAATAACTAATATTTCAGAATCATCATATGTATTCTGAATCTCTCCTAATTCATTTGGTTCTACATTATTGTCTAATAATTTCTATCCTTGAAATGAACTATGAAACATTCATTGGATCTCATTTAAATCACAAATTGACAGGCATAAAACTTTATTTAGCAAGGATTCACTTCAGNGGTTTTTATAAGACAA]




>consensus_5812#0
TTCATCTTTGAATAGTCCAGGAGTTGAACTAGTGAGATAATGAAACTAGAAATAATTCAG
TCAATGACTTTGAAATGGATGGGATTTGATTATAAAGGTCTGCAAGATATATATTCAGTG
CTCAATACACAGATTCTCATGAAGCATTTTTCAGATCACTTAAGTGTTTTTGGTCATATT
GAACTCTTTTTCAACGTTTACAATATTGATCAGGATGACAAAAATATTTTACTAATATTT
TATCATACTACTACAACTATTTGTCTGAACACCGATAAGCAATTATCCTGTTTTAAATAA
CTAATATTTCAGAATCATCATATGTATTCTGAATCTCTCCTAATTCATTTGTTCTACATT
ATTGTCTAATAATTTCTATCCTTGAAATGAACTATGAAACATTCATTGATCTCATTTAAA
TCACAAATTGACAGTCATAAAACTTTATTTAGCAAGGATTCACTTCAGNGGTTTTTATAA
GACAA

clustalw multiple alignements is not computed in this case