cluster # 5997

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Schistosoma mansoni
cluster # 5997 cluster # 5997 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5997#0 length = 649 sequences # 3

consensusID : consensus_5997#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 649
fasta sequence

                              [TTTTTTAACTTTTGAAGCAAAAAATATTTAGCAGTTCATTTCATTACTTCCTATCTTTCTTTGTTTATCTGTAAAAAAATGAGATTTTATTTTCTCATTTATCTATCCTTCTGGTTACATTGCACCTATTGTCTAGCTCAGGATAAACAAAATTTATTCCATCAGTTATACACTTTGTTTACTGGG-AATCAAACATTGACCAATATTATACCATCCAGTTGGTTAGATTATCTTGTTAGTTTGCCTGGATCTGGATATTTAATCGCATTTGTTTATTGGCTACGTCATCCGCTTCTTTTGTGTTTTCTACTTCCATTTCTATTAATCTTTTTCATTTACTTCACTGTAATTTTACTTCATTTATACCATTTACGTTTTTGGCTACGTCGTCATTTAAGTCGTTTATTGTCCAAGTTCAGACAATCATCAACTTCATCAATATCCATATCATCCACTAGTCACATGTGTTTAGATTCATTAGCGGAATTATTACGCCGTATTGTTGCTGCTGTATGGGATGCACATGGACGTATATTTCACGGTTATGAAGTAATTGGTATGGAGAAATTACCGCCCAATGGACCAGCTTATTTAGTTTATTATCATGGAACATGTCCTTTTGATGCATATTATTTTACATCGAGATATT]

[+] EMBL CD200329             [TTTTTTAACTTTTGAAGCAAAAAATATTTAGCAGTTCATTTCATTACTTCCTATCTTTCTTTGTTTATCTGTAAAAAAATGAGATTTTATTTTCTCATTTATCTATCCTTCTGGTTACATTGCACCTATTGTCTAGCTCAGGATAAACAAAATTTATTCCATCAGTTATACACTTTGTTTACTGGGAAATCAAca                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD082992             [                                 GTTCATTTCATTACTTCCTATCTTTCTTTGTTTATCTGTAAAAAAATGAGATTTTATTTTCTCATTTATCTATCCTTCTGGTTACATTGCACCTATTGTCTAGCTCAGGATAAACAAAATTTATTCCATCAGTTATACACTTTGTTTACTGGG AATCAAACATTGACCAATATTATACCATCCAGTTGGTTAGATTATCTTGTTAGTTTGCCTGGATCTGGATATTTAATCGCATTTGTTTATTGGCTACGTCATCCGCTTCTTTTGTGTTTTCTACTTCCATTTCTATTAATCTTTTTCATTTACTTCACTGTAATTTTACTTCATTTATACCATTTACGTTTTTGGCTACGTCGTCATTTAAGTCGTTTATTGTCCAAGTTCAGACAATCATCAACTTCATCAATATCCATATCATCCACTAGTCACATGTGTTTAGATTCATTAGCGGAATTATTACGCCGTATTGTTGCTGCTGTATGGGATGCACATGGACGTATATTTCACGGTTATGAAGTAATTGGTATGGAGAAATTACCGCCCAATGGACCAGCTTATTTAGTTTATTATCATGGAACATGTCCTTTTGATGCATATTATTTTACATCGAGATATT]
[-] EMBL CD201287             [                                                                                                                                                                           ACTTTGTTTACTGGG AATCAAACATTGACCAATATTATACCATCCAGTTGGTTAGATTATCTTGTTAGTTTGCCTGGATCTGGATATTTAATCGCATTTGTTTATTGGCTACGTCATCCGCTTCTTTTGTGTTTTCTACTTCCATTTCTATTAATCTTTTTCATTTACTTCACTGTAATTTTACTTCATTTATACCATTTACGTTTTTGGCTACGTCGTCATTTAAGTCGTTTATTGTCCAAGTTCAGACAATCATCAACTTCATCAATATCCATATCATCCACTAGTCACATGTGTTTAGATTCATTAGCGGAATTATTACGCCGTATTGTTGCTG                                                                                                                                             ]




>consensus_5997#0
TTTTTTAACTTTTGAAGCAAAAAATATTTAGCAGTTCATTTCATTACTTCCTATCTTTCT
TTGTTTATCTGTAAAAAAATGAGATTTTATTTTCTCATTTATCTATCCTTCTGGTTACAT
TGCACCTATTGTCTAGCTCAGGATAAACAAAATTTATTCCATCAGTTATACACTTTGTTT
ACTGGGAATCAAACATTGACCAATATTATACCATCCAGTTGGTTAGATTATCTTGTTAGT
TTGCCTGGATCTGGATATTTAATCGCATTTGTTTATTGGCTACGTCATCCGCTTCTTTTG
TGTTTTCTACTTCCATTTCTATTAATCTTTTTCATTTACTTCACTGTAATTTTACTTCAT
TTATACCATTTACGTTTTTGGCTACGTCGTCATTTAAGTCGTTTATTGTCCAAGTTCAGA
CAATCATCAACTTCATCAATATCCATATCATCCACTAGTCACATGTGTTTAGATTCATTA
GCGGAATTATTACGCCGTATTGTTGCTGCTGTATGGGATGCACATGGACGTATATTTCAC
GGTTATGAAGTAATTGGTATGGAGAAATTACCGCCCAATGGACCAGCTTATTTAGTTTAT
TATCATGGAACATGTCCTTTTGATGCATATTATTTTACATCGAGATATT

clustalw multiple alignements is not computed in this case