cluster # 6038

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Schistosoma mansoni
cluster # 6038 cluster # 6038 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6038#0 length = 376 sequences # 4

consensusID : consensus_6038#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 376
fasta sequence

                              [CATTCACGCATGCTACGTTGATATTCCAGAAAGCTCCAGCGGGTCCTGATCGGGTGGAAAACTTTTTGGTTCCTTTAG-AACCTCTGAAGGATCCATCGTGTTTCTCG-AAATTCTTCCCAACAATTTCATTTTATG-ACCATGAAGCACGGCCTTTAGTC-AATTACTGAAGAAGTTGGATGACGTG-ACTGGAAATCGGTAAGAATACTTC-AGATGCATTCACTTTTT-ATTTTTCCCTAAATCTTGGGTTTCGATATTATTCT-ATATTTTCACTCCACAAATTCATCTTTTCTTTCTGAAACGTATTCT-ATATCTTCAGCTTTATTGTCACGAATGCTATTATTATTCTGGATTCGTTGCTACTCATCATATTGACTTC]

[+] EMBL CD157760             [CATTCACGCATGCTACGTTGATATTCCAGAAAGCTCCAGCGGGTCCTGATCGGGTGGAAAACTTTTTGGTTCCTTTAGAAACCTCTGAAGGATCCATCGTGTTTCTCGAAAATTCTTCCCAACAATTTAATTTTATGAACCATGAAGCACGGCCTTTAGTCAAATTACTGAAGAAGTTGGATGACGTGAACTGGAAATCGGTAAGAATACTTCAAGATGCATTCACTTTTTAATTTTTCCCTAAATCTTGGGTTTCGATATTATTCTAATATTTTCACTCCACAAATTCACCTTTTCTTTCTGAAACGTATTCTAATATCTTCAGCTATATTGCCACGAATGCTATTATTATTCAGGATTCGTTGCTACTCATCATATTGACTT ]
[-] EMBL CD157707             [                                                                    ggTCCTTTAG  ACCTCT AAGGATCCATCGTG TTCTCG  AATTCTTCCCAACAATTTCATTTTATG ACCATGAAGCACGGCCTTTAGTC AATTACTGAAGAAGTTGGATGACGTG ACTGGAAATCGGTAAGAATACTTC AGATGCATTCACTTTTT ATTTTTCCCTAAATCTTGGGTTTCGATATTATTCT ATATTTTCACTCCACAAATTCATCTTTTCTTTCTGAAACGTATTCT ATATCTTCAGCTTTATTGTCACGAATGCTATTATTATTCTGGATTCGTTGCTACTCATCATATTGACTTC]
[-] EMBL CD157746             [                                                                          TTAG AACCTCTGAAGGATCCATCGTGTTTCTCG AAATTCTTCCCAACAATTTCATTTTATG ACCATGAAGCACGGCCTTTAGTC AATTACTGAAGAAGTTGGATGACGTG ACTGGAAATCGGTAAGAATACTTC AGATGCATTCACTTTTT ATTTTTCCCTAAATCTTGGGTTTCGATATTATTCT ATATTTTCACTCCACAAACTCATCTTTTCTTTCTGAAACGTATTCT ATATCTTCAGCTTTATTGTCACGAATGCTATTATTATTCTGGATTCGTTGCTACTCATCATATTGACTTC]
[-] EMBL CD157556             [                                                                                                                                                               TC AATTACTGAAGAAGTTGGATGACGTG ACTGGAAATCGGTAAGAATACTTC AGATGCATTCACTTTTT ATTTTTCCCTAAATCTTGGGTTTCGATATTATTCT ATATTTTCACTCCACAAATTCATCTTTTCTTTCTGAAACGTATTCT ATATCTTCAGCTTTATTGTCACGAATGCTATTATTATTCTGGATTCGTTGCTACTCATCATATTGACTTC]




>consensus_6038#0
CATTCACGCATGCTACGTTGATATTCCAGAAAGCTCCAGCGGGTCCTGATCGGGTGGAAA
ACTTTTTGGTTCCTTTAGAACCTCTGAAGGATCCATCGTGTTTCTCGAAATTCTTCCCAA
CAATTTCATTTTATGACCATGAAGCACGGCCTTTAGTCAATTACTGAAGAAGTTGGATGA
CGTGACTGGAAATCGGTAAGAATACTTCAGATGCATTCACTTTTTATTTTTCCCTAAATC
TTGGGTTTCGATATTATTCTATATTTTCACTCCACAAATTCATCTTTTCTTTCTGAAACG
TATTCTATATCTTCAGCTTTATTGTCACGAATGCTATTATTATTCTGGATTCGTTGCTAC
TCATCATATTGACTTC

clustalw multiple alignements is not computed in this case