cluster # 6161

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Schistosoma mansoni
cluster # 6161 cluster # 6161 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6161#0 length = 437 sequences # 4

consensusID : consensus_6161#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 437
fasta sequence

                              [AAAAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTT-CGTCGTTTTTCCATTTGCC-TTTAAA-TTTT-TTTTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATAATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATGATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGTTTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACATGTTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGGACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTACGAGTGCAGCGATCGCTC]

[+] EMBL CD140694             [AAAAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTT CGTCGTTTTTCCATTTGCC TTTAAA TTTT TTTTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATAATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATGATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGTTTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACATGTTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGGACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTACGAGTGCAGCGATCGCTC]
[+] EMBL CD140637             [AAAAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTTNCGTCGTTTTTCCATTTGCCNTTTAAA TTTT TTCTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATAATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATGATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGTTTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACATGCTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGGACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTACGAGTGCA          ]
[-] EMBL CD140528             [ AAAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTT CGTCGTTTTTCCATTTGCC TTTAAATTTTT TTTTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATAATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATGATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGTTTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACATGTTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGGACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTACGAGTGCAG         ]
[-] EMBL CD140658             [  AAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTT CGTCGTTTTTCCATTGGCC TTTAAA TTTTGTTTTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATAATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATGATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGTTTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACATGTTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGGACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTACGAGTGCAG         ]




>consensus_6161#0
AAAAAAAATTCTATCGCTATGAAAAAGAAAAAAGAAAAAGTCTTTTCGTCGTTTTTCCAT
TTGCCTTTAAATTTTTTTTTCACAATTTGTGCCGTAAAAAGGAACTTTGCAACGACAATA
ATATGTTGTACGTAAACCAACGCATTCGCCGTTGTTTTTACACGGACTTTTTACACAATG
ATCAACAGGTGATCGATCACGATTTGCCGTTCCGGATGTGATGAATTTGTTGTCACACGT
TTTGCCATAATAATCTTGTGTACAGAAACAATAAAACGATCCACTTGATAAAGTTTTACA
TGTTCCACCATTTTTACACGGATTGATCACTCCACAAGCGTCTTTTGTTGAAATCGACGG
ACTTTTTGTCACCGAAGGTTTGAGTGTTTTGCTGGCCGTTGGTCCTTTCGATGTTGTTAC
GAGTGCAGCGATCGCTC

clustalw multiple alignements is not computed in this case