cluster # 6343

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Schistosoma mansoni
cluster # 6343 cluster # 6343 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6343#0 length = 454 sequences # 4

consensusID : consensus_6343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 454
fasta sequence

                              [GGGCGCCTTTGAAAGGCCCTGACTTTTTACCGTGTCAAGGATGAAATTTGGTCACTTGCATTATCGCCGCGGTGTTATAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGGTTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCAGGGAGAAAGTACTTATTGTTGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACGTTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTG-ATGTTCCATATGGAGTGATACTATATTCTAGCACAACTGGAGTAAATAGATATTGTTGTAATAGTCACTTTAAAAATCAATTAAATACATGCCTACTATAGAAAAAAAAAAAAAAAAAGAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAANANNNNNNN]

[+] EMBL CD144509             [GGGCGCCTTTGAAAGGCCCTGACTTTTTACCGTGTCAAGGATGAAATTTGGTCACTTGCATTATCGCCGCGGTGTTACAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGGTTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCAGGGAGAAAGTACTTATTGTTGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACGTTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTG ATGTTCCATATGGAGTGATACTATATTCTAGCACAACTGGAGTAAATAGATATTGTTGTAATAGTCACTTTAAAAATCA                                                                                           ]
[+] EMBL AA629504             [             AGGCCCTGACTTTTTACCGTGTCAAGGATGAAATTTGGTCACTTGCATTATCGCCGCGGTGTTATAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGGTTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCAGGGAGAAAGTACTTATTGTTGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACGTTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTG ATGTTCC                                                                                                                                                                   ]
[+] EMBL CD131639             [                                    AAGGATGAAATTTGGTCACTTGCATTATCGCCGCGGTGTTATAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGGTTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCAGGGAGAAAGTACTTATTGTTGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACGTTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTG ATGTTCCATATGGAGTGATACTATATTCTAGCACAACTGGAGTAAATAGATATTGTTGTAATAGTCACTTTAAAAATCAATTAAATACATGCCTACTATAGAAAAAAAAAAAAAAAAAGAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAANANNNNNNN]
[+] EMBL BF936363             [                                     AGGATGAAATTTGGTCACTTGCATTATCGCCGCGGTGTTATAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGGTTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCACGGAGAAAGTACTTATTGTTGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACGTTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTGAATG TCCATATGGAGTGAT                                                                                                                                                       ]




>consensus_6343#0
GGGCGCCTTTGAAAGGCCCTGACTTTTTACCGTGTCAAGGATGAAATTTGGTCACTTGCA
TTATCGCCGCGGTGTTATAACGTATTCATTATCACCATACGAACAGAAAGCCTTCGCAGG
TTTCTTTAAAGATGGGTTCCCAAACTTGATGCGCAGGTTCAGGGAGAAAGTACTTATTGT
TGGTACTCCTTTTGTAATAACCTATATGATAATTGAGTGGGCTAATGAAGAAAATAAACG
TTCAAAGAGGAAAGCTGCACATATGCTTGAATAAAGTGTTTCTGATGTTCCATATGGAGT
GATACTATATTCTAGCACAACTGGAGTAAATAGATATTGTTGTAATAGTCACTTTAAAAA
TCAATTAAATACATGCCTACTATAGAAAAAAAAAAAAAAAAAGAGCGAAAAAAAAAAAAA
AAAAAAAAAAAAAGAAAAAAAAAAANANNNNNNN

clustalw multiple alignements is not computed in this case