cluster # 6380

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Schistosoma mansoni
cluster # 6380 cluster # 6380 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6380#0 length = 512 sequences # 4

consensusID : consensus_6380#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 512
fasta sequence

                              [ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANAAACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTGACAATCGAAAAATTCATCATCTGACTCATAGC]

[-] EMBL CD190028             [ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTTTAACATTGATCGAAAACGAACCAGGGTTTGT                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD164198             [           CCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANAAACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTGACAATCGAAAAATTCATCATCTGACTCATAGC]
[+] EMBL CD181981             [           CCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTTGACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATATTGTAGGTGTGTCACTAGTCGTCACTAAAATCTTCGGGTTCTCGTCTACCATTTTTTTAACAGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGCGCTAGGATATGGGCTGCTTTC ACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACGGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAg                                                                                                                ]
[-] EMBL CD193698             [                                                                                                                                                                                                                                                                  TTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAGGTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAACTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTC                                                                                                          ]




>consensus_6380#0
ATACAGACGTTCCCAAAATTTATCAGAATCAATGCAATTTAGGAGAAACTGAAGTAGGTT
GACGTTGCCTTTTGAAGCAATCACATGTAATGCATTATATCGAAAGCGTATTTGCAATAT
TGTAGGTGTGTCACTAGTCGTCACTAAAATCATCGGGTTCTCGTCTACCATTTTTTTAAC
AGCATCGACGTTTCCACTGTCTAACATTGATCGAAAACGAACCAGGGTTTGTTGACTAGC
GCTAGGATATGGGCTGCTTTCAACATCAGCTTTGGGTGATGGAGGGTAGGGGTTGCAGAG
GTTCTCCTCGTCAACCGGAGTATTCGCAAACTCGTTCGCATCCACATGATTAGCGAATAA
CTTAAGCCTAGCGCCTGTGATACTACGTAACTTTAAATAAGCCCTCTTTGGATCCAGANA
AACTCCACCTTGACCTTTACTCANAGGAGAAGCCACGGCATAGAAACAAGCCTCTGACTG
ACAATCGAAAAATTCATCATCTGACTCATAGC

clustalw multiple alignements is not computed in this case