Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6383 cluster # 6383       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6383#0 length = 740 sequences # 4  
consensusID : consensus_6383#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 740
fasta sequence 
                              [GCACTCGATCGCTATCAAATGTGAGAACATTCTGAAATCTCCGGAGGAAAATATTCACTCACTTAGAGACATTATAAAGACTTTTGAGTCTGAACATTTCCGAAAATTCAGACAAATTAGGGCTTTAGTTATTGCTTCTTTGTGTGTCGTCTTCAAGGACGTGCTGCCTGCTTACCGCATACGACTTGCGACTGAGAAAGAAAAGACTCAACCGACTAAAAAAGAAACCAGGAAAATATGGCATTTTGAGGAACACTTACTTTTAAACTACCGGAAGTATACTGAATTGCTCAGAGTTATCCTAAAAGACAAGTGTTTGGACATGAAGTCTCCTCGTTTGAAAATATACTTAAAATTGGATTGGAATGAAGTAGTCTTGCAACATTTTTAGTGACGTTTTGCAGGACGAAAAGCTAGCTGCCATAAGGTGTGTCTGTCAGCTCTTAGAAAATCATCCAGACTTCAACTACAGCAAAGAGTTAATAGAAGTCTTACCCCAATACCTCAACATTTCAAAGACACAGGTCTTCTCAGTGATAATAACGACTCTGAATAACATATTTGAAAACGATACTGATCGAGACGTTACTTTAACGATCTGCCGTACCATTCACCGCTTTTGTCGGTCAAAGTCTTACAAAGTCGGAGTCCCAGTCATCAGCGCTTTGTCTTGTGTCTCTATCACAGAGGTCGAACGCCAAGAAAAGGAGGGAAAGCCTAAGCTCGATAGGCGTCTACGT]

[+] EMBL AI976011             [GCACTCGATCGCTATCAAATGTGAGAACATTCTGAAATCTCCGGAGGAAAATATTCACTCACTTAGAGACATTATAAAGACTTTTGAGTCTGAACATTTCCGAAAATTCAGACAAATTAGGGCTTTAGTTATTGCTTCTTTGTGTGTCGTCTTCAAGGACGTGCTGCCTGCTTACCGCATACGACTTGCGACTGAGAAAGAAAAGACTCAACCGACTAAAAAAGAAACCAGGAAAATATGGCATTTTGAGGAACACTTACTTTTAAACTACCGGAAGTATACTGAATTGCTCAGAGTTATCCTAAAAGACAAGTGTTTGGACATGAAGTCTCCTCGTTTGAAAATATACTTAAAATTGGATTGGAATGAAGTAGTCTTGCAACATTTTTAGTGACGTTTTGCAGGACGAAAAGCTAGCTGCCATAAGGTGTGTCTGTCAGCTCTTAGAAAATCATCCAGACTTCAACTACAGCAAAGAGTTAATAGAAGTCTTACCCCAATACCTCAACATTTCAAAGACACAGGTCTTCTCAGTGATTATAACGACTCTGAATAACATATTNGAAAACGATACTGATCGAGA                                                                                                                                                             ]
[+] EMBL CD149845             [                                                                                                                                TTATTGCTTCTTTGTGTGTCGTCTTCAAGGACGTGCTGCCTGCTTACCGCATACGACTTGCGACTGAGAATGAAAAGACTCAACCGACTAAAAAAGAAACCAGGAAAATATGGCATTTTGAGGAACACCTACTTTTAAACTACCGGAAGTATACTGAATTGCTCAGAGTTATCCTAAAAGACAAGTGTTTGGACATGAAGTCTCCTCGTTTGGAAATATACTCAAAAT                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD185302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCAGTGATAATAACGACTCTGAATAACATATTTGAGAACGATACTGTTCGAGACGTTACTTTAACGATCTGCCGTACCATTCACCGCTTTTGTCGGTCAAAGTCTTACAAAGTCGGAGTCCCAGTCATCAGCGCTTTGTCTTGTGTCTCTATCACAGAGGTCGAACGCCAAGAAAAGGAGGGAAAGCCTAAGCTCGATAGGCGTCTACGT]
[+] EMBL CD185194             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCAGTGATAATAACGACTCTGAATAACATATTTGAAAACGATACTGATCGAGACGTTACTTTAACGATCTGCCGTACCATTCACCGCTTCTGTCGGTCAGAGTCTTACAAAGTCGGAGTCCCAGTCATCAGCGCATTGTCTTGTGTCTCTATCACAGAGGTCGAACGCCAAGAAAAGGAGGGAAAGCCTAAGCTCGATAGGCGTCTACGT]




>consensus_6383#0
GCACTCGATCGCTATCAAATGTGAGAACATTCTGAAATCTCCGGAGGAAAATATTCACTC
ACTTAGAGACATTATAAAGACTTTTGAGTCTGAACATTTCCGAAAATTCAGACAAATTAG
GGCTTTAGTTATTGCTTCTTTGTGTGTCGTCTTCAAGGACGTGCTGCCTGCTTACCGCAT
ACGACTTGCGACTGAGAAAGAAAAGACTCAACCGACTAAAAAAGAAACCAGGAAAATATG
GCATTTTGAGGAACACTTACTTTTAAACTACCGGAAGTATACTGAATTGCTCAGAGTTAT
CCTAAAAGACAAGTGTTTGGACATGAAGTCTCCTCGTTTGAAAATATACTTAAAATTGGA
TTGGAATGAAGTAGTCTTGCAACATTTTTAGTGACGTTTTGCAGGACGAAAAGCTAGCTG
CCATAAGGTGTGTCTGTCAGCTCTTAGAAAATCATCCAGACTTCAACTACAGCAAAGAGT
TAATAGAAGTCTTACCCCAATACCTCAACATTTCAAAGACACAGGTCTTCTCAGTGATAA
TAACGACTCTGAATAACATATTTGAAAACGATACTGATCGAGACGTTACTTTAACGATCT
GCCGTACCATTCACCGCTTTTGTCGGTCAAAGTCTTACAAAGTCGGAGTCCCAGTCATCA
GCGCTTTGTCTTGTGTCTCTATCACAGAGGTCGAACGCCAAGAAAAGGAGGGAAAGCCTA
AGCTCGATAGGCGTCTACGT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)