Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7040 cluster # 7040       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7040#0 length = 938 sequences # 4  
consensusID : consensus_7040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 938
fasta sequence 
                              [GTGGGACAATAGGAACTCGATTAATTCCTCAAACTTATCGTTTCGGTGGTTCACAGTCATTTCAAGGACATTCTCGTGTAAATTTCAAGCGTTTACCACAATCTATTATCCGACCTAGTATGGATGAATCTGAGACAGTGTTTGTCTCAAGTCCTCGATTTAATGTTGCCAATGTCATTAAAAATGATACGTTCGCACCTAGTGGATCAGTTTTGACAGTTCTTAGTCCAAATACAAAGCATCAAACAGTTGCATGTCAGAACAATCAACTACCCACTATAGCCCCTGCTCCAGGATGTTTGGAATCCTCTGGATCTAATGATATTAATCCAACTGTTGTACGGGTCCTCAAACTCCAGTAATATGCTTCGTACTGTACCGTGCCCACATAAAGGTTGTGGAAAACTTTTTCGTGACAATTCTGCTATGCGCAAGCATTTGCATACACATGGCCCACGGGTACATGTTTGTGCTGAGTGCGGAAAAGCATTTGTTGAATCTAGCAAATTAAAAAGACATCAACTAGTTCATACTGGTGAA-AAGCCTTTCCAATGCAATTTTGAGGGCTGTGGCAAGCGTTTTTCATTGGATTTCAATTTACGTACACATGTACGTATACATACTGGTGATCGTCCTTACATATGTCCCTTTGAGAACTGTCATAAGCGCTTTGCTCAATCAACAAATTTAAAGTCTCATATTATGACACATGCCAAGGTCAGATACCGAGGTCCGCGTAGCTCTTCAACAACTTCACAAACACCCGGCTACTTCTCTGAGCTTGATGAACTGCCAATTTCTCAGCAAACTTCGGTTGTCGATAATGTTAATGATTCGAATAAACCCTATCCCACGTCAGATAATGATGGCGAAAGTAATGTACAGGTCAAAAGTACATCTCCTTTTATGGTAACCTCATCTAATTCTTCCAACTCGAA]

[+] EMBL CD096781             [GTGGGACAATAGGAACTCGATTAATTCCTCAAACTTATCGTTTCGGTGGTTCACAGTCATTTCAAGGACATTCTCGTGTAAATTTCAAGCGTTTACCACAATCTATTATCCGACCTAGTATGGATGAATCTGAGACAGTGTTTGTCTCAAGTCCTCGATTTAATGTTGCCAATGTCATTAAAAATGATACGTTCGCACCTAGTGGATCAGTTTTGACAGTTCTTAGTCCAAATACAAAGCATCAAACAGTTGCATGTCAGAACAATCAACTACCCACTATAGCCCCTGCTCCAGGATGTTTGGAATCCTCTGGATCTAATGATATTAATCCAACTGTTGTACGGGTCCTCAAACTCCAGTAATATGCTTCGTACTGTACCGTGCCCACATAAAGGTTGTGGAAAACTTTTTCGTGACAATTCTGCTATGCGCAAGCATTTGCATACACATGGCCCACGGGTACATGTTTGTGCTGAGTGCGGAAAAGCATTTGTTGAATCTAGCAAATTAAAAAGACATCAACTAGTTCATACTGGTGAA AAGCCTTTCCAATGCAATTTTGAGGGCTGTGGCAAGCGTTTTTCATTGGATTTC ATTTACGTACACATGTACGTATACATACTGG                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD148954             [                                                                                                                                                                                                                                                                                                                                            tgttgTGTACGGGTCCTCAAACTCCAGTAATATGCTTCGTACTGTACCGTGCCCTCATAAAGGTTGTGGAAAACTTTTTCGTGACAATTCTGCTATGCGCAAGCATTTGCATACACATGGCCCACGGGTACATGTTTGTGCTGAGTGCGGAAAAGCATTTGTTGAATCTAGCAAATTAAAAAGACATCAACTAGTTCATACTGGTGAA AAGCCTTTCCAATGCAATTTTGAGGGCTGCGGCAAGCGTTTTTCATTGGATTTCAATTCACGTACACATGTACGTATACATACTGGTGATCGTCCTTACATATGTCCCTTTGAGAACTGTCATAAGCGCTTTGCTCAATCAACAAATTTAAAGTCTCATATTATGACACATGCCAAGGTCAGATACCGTGGTCCGCGTAGCTCTTCAACAACTTCACAAACACCCGGC                                                                                                                                                                          ]
[-] EMBL CD178235             [                                                                                                                                                                                                                                                                                                                                                      GGGTCCTCAAACTCCAGTAATATGCTTCGTACTGTACCGTGCCCACATAAAGGTTGTGGANAACTTTTTCGTGACAATTCTGCTATGCGCAAGCATTTGCATACACATGGCCCACGGGTACATGTTTGTGCTGAGTGCGGAAAAGCATTTGTTGAATCTAGCAAATTAAAAAGACATCAACTAGTTCATACTGGTGAA AAGCCTTTCCAATGCAATTTTGAGGGCTGTGGCAAGCGTTTTTCATTGGATTTCAATTTACGTACACATGTACGTATACATACTGGTGATCGTCCTTACATATGTCCCTTTGAGAACTGTCATAAGCGCTTTGCTCAATCAACAAATTTAAAGTCTCATATTATGACACATGCCAAGGTCAGATACCGAGGTCCGCGTAGCTCTTCAACAACTTCACAAACACCCGGCTACTTCTCTGAGCTTGATGAACTGCCAATTTCTCAGCAAACTTCGGTTGTCGATAATGTTAATGATTCGAATAAACCCTATCCCACGTCAGATAATGATGGCGAAAGTAATGTACAGGTCAAAAGTACATCTCCTTTTATGGTAACC                       ]
[-] EMBL CD120089             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCATACT GTGAANNAGCCTTTCCAATGCAATTTTGAGGGCTGTGGCAAGCGTTTTTCATTGGATTTCAATTTACGTACACATGTACGTATACATACTGGTGATCGTCCTTACATATGTCCCTTTGAGAACTGTCATAAGCGCTTTGCTCAATCAACAAATTTAAAGTCTCATATTATGACACATGCCAAGGTCAGATACCGAGGTCCGCGTAGCTCTTCAACAACTTCACAAACACCCGGCTACTTCTCTGAGCTTGATGAACTGCCAATTTCTCAGCAAACTTCGGTTGTCGGTAATGTTAATGATTCGAATAAACCCTATCCCACGTCAGATAATGATGGCGAAAGTAATGTACAGGTCAAAAGTACATCTCCTTTTATGGTAACCTCATCTAATTCTTCCAACTCGAA]




>consensus_7040#0
GTGGGACAATAGGAACTCGATTAATTCCTCAAACTTATCGTTTCGGTGGTTCACAGTCAT
TTCAAGGACATTCTCGTGTAAATTTCAAGCGTTTACCACAATCTATTATCCGACCTAGTA
TGGATGAATCTGAGACAGTGTTTGTCTCAAGTCCTCGATTTAATGTTGCCAATGTCATTA
AAAATGATACGTTCGCACCTAGTGGATCAGTTTTGACAGTTCTTAGTCCAAATACAAAGC
ATCAAACAGTTGCATGTCAGAACAATCAACTACCCACTATAGCCCCTGCTCCAGGATGTT
TGGAATCCTCTGGATCTAATGATATTAATCCAACTGTTGTACGGGTCCTCAAACTCCAGT
AATATGCTTCGTACTGTACCGTGCCCACATAAAGGTTGTGGAAAACTTTTTCGTGACAAT
TCTGCTATGCGCAAGCATTTGCATACACATGGCCCACGGGTACATGTTTGTGCTGAGTGC
GGAAAAGCATTTGTTGAATCTAGCAAATTAAAAAGACATCAACTAGTTCATACTGGTGAA
AAGCCTTTCCAATGCAATTTTGAGGGCTGTGGCAAGCGTTTTTCATTGGATTTCAATTTA
CGTACACATGTACGTATACATACTGGTGATCGTCCTTACATATGTCCCTTTGAGAACTGT
CATAAGCGCTTTGCTCAATCAACAAATTTAAAGTCTCATATTATGACACATGCCAAGGTC
AGATACCGAGGTCCGCGTAGCTCTTCAACAACTTCACAAACACCCGGCTACTTCTCTGAG
CTTGATGAACTGCCAATTTCTCAGCAAACTTCGGTTGTCGATAATGTTAATGATTCGAAT
AAACCCTATCCCACGTCAGATAATGATGGCGAAAGTAATGTACAGGTCAAAAGTACATCT
CCTTTTATGGTAACCTCATCTAATTCTTCCAACTCGAA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)