These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7220#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 699 fasta sequence [TGATTTGTCACTGTCACACTTCACTGTAACACATACAAGAGTGGTCAACTGTATATCCCCNATCCGAAAATGATTCNAGTGAAATTCAAATTTCANNAACAACTCAGCTTGGNTTTAATCCNNGGATCTAGGAAGCTGTATACANGAATGCATCGTTGTCAATATTGAACTATTAGATGATTGACGGAATAAGATGACATATTTTAATAATTTAAACTTCACATTACATTCGAAACGAACAAGCATGAGAACCAGAATATACCAAGCTGAACAGTTGTTCAACATATCATAGTTGGTATGAACAATGGTGGAGAATGACAATAAAGTTTATACAACAGTCTATGACATACATATTAAATTTTCAAGTACAATTTATATAATATCTCTGACAAGCGAGATCTAACAATTGAGGGGAAATAACACTCATGAATGTTGAAGCTTTGGGTGCCTGCATGTGCATTCAAAATACAA-CATGCTTATTGA-TGAGATTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGCTGAGTATGTGACAACTATTTGTCAGATCACTACCTCACTAAATACTGAAACAACAATATGAAACTGTACTGTGTCCTCATGACTTCCAATTATGAAGAAAACTCGCTTCGTAAGGCGTTTGC] [+] EMBL CD113841 [TGATTTGTCACTGTCACACTTCACTGTAACACATACAAGAGTGGTCAACTGTATATCCCCNATCCGAAAATGATTCNAGTGAAATTCAAATTTCANNAACAACTCAGCTTGGNTTTAATCCNNGGATCTAGGAAGCTGTATACANGAATGCATCGTTGTCAATATTGAACTATTAGATGATTGACGGAATAAGATGACATATTTTAATAATTTAAACTTCACATTACATTCGAAACGAACAAGCATGAGAACCAGAATATACCAAGCTGAACAGTTGTTCAACATATCATAGTTGGTATGAACAATGGTGGAGAATGACAATAAAGTTTATACAACAGTCTATGACATACATATTAAATTTTCAAGTACAATTTATATAATATCTCTGACAAGCGAGATCTAACAATTGAGGGGAAATAACACTCATGAATGTTGAAGCTTTGGGTGCCTGCATGTGCATTCAAAATACAA CATGCTTATTGA TGAGATTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGC ] [-] EMBL CD113899 [ TCTCTGACAAGCGAGATCTAACAATTGAGGGGAAATAACACTCATGAATGTTGAAGCTTTGGGTGCCTGCATGTGCATTCAAAATACAA CATGCTTATTGA TGAGACTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGCTGAGTATGTGACAACTATTTGTCAGATCACTACCTCACTAAATACTGAAACAACAATATGAAACTGTACTGTGTCCTCATGACTTCCAATTATGAAGAAAACTCGCTTCGTAAGGCGTTTGC] [-] EMBL CD113772 [ GGAAATAACACTCATGAATGTTGAAGCTTTGGGTGCCTGCATGTGCATTCAAAATACAA CATGCTTATTGA TGAGATTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGCTGAGTATGTGACAACTATTTGTCAGATCACTACCTCACTAAATACTGAAACAACAATATGAAACTGTACTGTGTCCTCATGACTTCCAATTATGAAGAAAACTCGCTTCGTAAGGCGTTTGC] [-] EMBL CD113836 [ TTCAAAATACAA CATGCTTATTGA TGAGATTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGCTGAGTATGTGACAACTATTTGTCAGATCACTACCTCACTAAATACTGAAACAACAATATGAAACTGTACTGTGTCCTCATGACTTCCAATTATGAAGAAAACTCGCTTCGTAAGGCGTTTGC] [+] EMBL CD113876 [ CAACCATGCTTATTGACTGAGATTGATGAGTTTTAGTACGATCACAAGGTTTCATTTAATTACCATCACCATTCTAAGCTTCATTTTAGAGAAGATATTGAATATCTTAGCTGAGTATGTGACAACTATTTGTCAGATCACTACCTCACTAAATACTGAAACAACAATATGAAACTGTACTGTGTCCTCATGACTTCCAATTATGAAGAAAACTCGCTTCGTAAGGCGTTTG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||