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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7249 cluster # 7249       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7249#0 length = 825 sequences # 5  

consensusID : consensus_7249#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 825
fasta sequence
                              [ACCTAATACCGCAAAGGGTTTTTAAATGGGTTGGGTTCATAAAGAAATA-TTGGAAGTTTCATTTCCCCATTAATTTAAAAGTAGTTCCTGAAGTCCAGCAAGGGTTTGCTCTAACAAAAGAAATGTCTTG-ATTAGATTTAGGTGTACCAACA-GAAACCATTGATGCCAAAGCCTTTCCATGATATGTACCCATAGTATCAATACGAAAACCAGCAGTCTCCTCACGACCACCAGCAAAACGCTCTTGATCATATCTTGAATAATGCATCTGTGAGTGATGTTGAGCAGTAGAGTTGGAGACCGACATATGTTGCCCGGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATTTGTGGTGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAAGAGTTGGTTGAGCGTTGTTAGAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGGAGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTGCGCGTACTGGTGCTTCATCGGCCATAAGTGAAGCTCTGAGTAAAGTGCTACCGGAATATAACTGACCATGAGTACTATCGTCAATACGGATAATTGACTGAGATTCACCTCCGGGTACAATACTATGAAGGCCAACCCGAGAATCTCGAGCATCTAAGGATGATAGAGTTGATAAACCGATATCCCCTTCCTGACTAGGATAATTCGTTACAGGAACTTCCAGTG]

[-] EMBL CD201990             [ACCTAATACCGCAAAGGGTTTTTAAATGGGTTGGGTTCATAAAGAAATA TTGGAAGTTTCATTTCCCCATTAATTTAAAAGTAGTTCCTGAAGTCCAGCAAGGGTTTGCTCTAACAAAAGAAATGTTTTGTATTAGATTTAGGTGTACCAACAGGAAACCATTGATGCCAAAGCCTTTCCATGATATGTACCCATAGTATCAATACGAAAACCAGCAGTCTCCTCACGACCACCAGCAAAACGCTCTTGATCATATCTTGAATAATGCATCTGTGAGTGATGTTGAGCAGTAGAGTTGGAGACCGACATATGTTGCCCGGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATTTGTGGTGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAAGAGTTGGTTGAGCGTTGTTAGAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGGAGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTGCGCGTACT                                                                                                                                                                                                                         ]
[+] EMBL CD122814             [                                          AGGAATACTTGG AGTTTCATTT CCCATTGATCTAGAGGTAGTTCCTGGAGTACAGACAGGGTTCGCACTAGCAACAGAATTGTCTTG ATTAGATTTAGGTGTACCAACA GAAACCATTGATGCCAAAGCCTTTCCATGATATGTACCCATAGTATCAATACGAAAACCAGCAGTCTCCTCACGACCACCAGCAAAACGCTCTTGATCATATCTTGAATAATGCATCTGTGAGTGATGTTGAGCAGTAGAGTTGGAGACCGACATATGTTGCCCCGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATTTGTGGTGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAAGAGTTGGTTGAGCGTTGTTAGAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGGAGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTGCGCGTACTGGTGCTTCATCGGCCATAAGTGAAGCTCTGAGTAAAGTGCTACCGGAATATAACTGACCATGAGT                                                                                                                                                        ]
[-] EMBL CD122752             [                                                                                                                               CTTG ATTAGATTTAGGTGTACCAACA GAAACCATTGATGCCAAAGCCTTTCCATGATATGTACCCATAGTATCAATACGAAAACCAGCAGTCTCCTCACGACCACCAGCAAAACGCTCTTGATCATATCTTGAATAATGCATCTGTGAGTGATCTTGAGCAGTAGAGTTGGAGACCGACATATGTTGCCCGGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATTTGTGGTGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAAGAGTTGGTTGAGCGTTGTTAGAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGGAGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTGCGCGTACTGGTGCTTCATCGGCCATAAGTGAAGCTCTGAGTAAAGTGCTACCGGAATATAACTGACCATGAGTACTATCGTCAATACGGATAATTGACTGAGATTCACCTCCGGGTACAATACTA                                                                                                    ]
[-] EMBL CD182914             [                                                                                                                                                                                                                                                                                                                   CATATGTGCCCCGGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATNTGTGGTGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAGGAGTTGGTTGAGCGTTGTTAAAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGGAGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTGCGCGTACTGGTGCTTCATCG                                                                                                                                                                                                             ]
[-] EMBL CD114490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTTTGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGGCGCTCACGAGCTACAATTGCGCGTACTGGTGCTTCATCGGCCATAAGTGAAGCTCTGAGTAAAGTGCTACCGGAATATAACTGGCCATGAGTACTATCGTCAATACGGATAATTGACTGAGATTCACCTCCGGGTACAATACTATGAAGGCCAACCCGAGAATCTCGAGCATCTAAGGATGATAGAGTTGATAAACCGATATCCCCTTCCTGACTAGGATAATTCGTTACAGGAACTTCCAGTG]


>consensus_7249#0 ACCTAATACCGCAAAGGGTTTTTAAATGGGTTGGGTTCATAAAGAAATATTGGAAGTTTC ATTTCCCCATTAATTTAAAAGTAGTTCCTGAAGTCCAGCAAGGGTTTGCTCTAACAAAAG AAATGTCTTGATTAGATTTAGGTGTACCAACAGAAACCATTGATGCCAAAGCCTTTCCAT GATATGTACCCATAGTATCAATACGAAAACCAGCAGTCTCCTCACGACCACCAGCAAAAC GCTCTTGATCATATCTTGAATAATGCATCTGTGAGTGATGTTGAGCAGTAGAGTTGGAGA CCGACATATGTTGCCCGGTACTTAGTGCCATAGCTGATCCAGTGTTCGTATAATTTGTGG TGCCATTAGGTTTAGAATAGTAAGTCCCAACAGCCAATGGTTGGGGAAAAAGAGTTGGTT GAGCGTTGTTAGAGATAAAACCAAACTTTCCAACAGCTTTTGCATCGGGAGCAGCATGGG AGTCTTCTTTTAAAATTACATTCCGCAAAATCCCCAAAACAATGTTTTCATAGAATGTTT TGCCTTGACTTTGCAAAACTGAAACACGAGTCCGCCAACGACGCTCACGAGCTACAATTG CGCGTACTGGTGCTTCATCGGCCATAAGTGAAGCTCTGAGTAAAGTGCTACCGGAATATA ACTGACCATGAGTACTATCGTCAATACGGATAATTGACTGAGATTCACCTCCGGGTACAA TACTATGAAGGCCAACCCGAGAATCTCGAGCATCTAAGGATGATAGAGTTGATAAACCGA TATCCCCTTCCTGACTAGGATAATTCGTTACAGGAACTTCCAGTG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)