Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7641 cluster # 7641       Sequences # 5       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7641#0 length = 804 sequences # 5  
consensusID : consensus_7641#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 804
fasta sequence 
                              [CTCTCGTTCTCTTTGTTTTAATATGAAACATTGTACCAAAACACATAGATTCTTACGAATTCGTACGTACACCATTTAGTCACATATATATGTCACTACTCAAACCTCACCAATCTACGTACACTTAACGAAAATCA-TTTCAGCTATCATCAGTATTGAATCTAAAATGTATATAGATCATTGTGATTCACACATGGCAATAAGCAGACTTCATAAAGCAGAAAGAACGCAAATCTACAAAATCATTAACATAATTTATCAAATACAGATTAACAGTTTGTTTATAGTGTTTTTGTAAAATATGATACACTCCAAGATCATCATCAACGACGATGTTGTTGATGCTGAGGATGTTGATAACGTCGTTTCATGTGAGTAAAATAAGATTCAGATAAATATTGAGTGATTACATCATCCAGATAGATCATTCGTATTATTTCTACCATGGAAACAATTACAAAATATGAGGAATGCTTCTTGGTACAATTTGTTTAAAATTAAACAATCAATCACTATTTGATAAATTANAAACTAAATATTCTTTTTGATGATGATGAAGTAAGAGATCATGCATAGTACATCANAGTATATCGAAGATAGGAGAAACAGAAAATTCAATATGATCTAACTCACTAAGTAATGATCTGTATACTCGCCTTTGAGCAGTGTTATTTATCTATGTAAAGGCTATTGTTGCTATCCCTCAGTTCAAACAGAAAAACAAGTAGGGAGGGACTTGAACCACAGAATTATTCATTGAAAATTTAACATCTTGGTCACTATAACCATCAATGTTCAGCAGCT]

[-] EMBL CD063724             [CTCTCGTTCTCTTTGTTTTAATATGAAACATTGTACCAAAACACATAGATTCTTACGAATTCGTACGTACACCATTTAGTCACATATATATGTCACTACTCAAACCTCACCAATCTACGTACACTTAACGAAAATCA TTTCAGCTATCATCAGTATTGAATCTAAAATGTATATAGATCATTGTGATTCACACATGGCAATAAGCAGACTTCATAAAGCAGAAAGAACGCAAATCTACAAAATCATTAACATAATTTATCAAATACAGATTAACAGTTTGTTTATAGTGTTTTTGTAAAATATGATACACTCCAAGATCATCATCAACGACGATGTTGTTGATGCTGAGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD077441             [                                                                                                                    ACGTACACTTAACGAAAATCA TTTCAGCTATCATCAGTATTGAATCTAAAATGTATATAGATCATTGTGATTCACACATGGCAATAAGCAGACTTCATAAAGCAGAAAGAACGCAAATCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD077447             [                                                                                                                                CGAAAATCATTTTCAGCTATCATCAGTATTGAATCTAAAATGTATATAGATCATTGTGATTCACACATGGCAATAAGCAGACTTCATAAAGCAGAAAGAACGCAAATCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD158155             [                                                                                                                                                                                                                                 GAACGCAAATCTACAAAATCATTAACATAATTTATCAAATACAGATTAACAGTTTGTTTATAGTGTTTTTGTAAAATATGATATACTCAAAGATCATCATCAACGACGATGTTGTTGATGCTGAGGATGTTGATAACGTCGTTTCATGTGAGTAAAATAAGATTCAGATAAATATTGAGTGATTACATCATCCAGATAGATCATTCGTATTATTTCTACCATGGAAACAATTACAAAATATGAGGAATGCTTCTTGGTACAATTTGTTTAAAATTAAACAATCAATCACTATTTGATAAATTANAAACTAAATATTCTTTTTGATGATGATGAAGTAAGAGATCATGCATAGTACATCANAGTATATCGAAGATAGGAGAAACAGAAAA                                                                                                                                                                                               ]
[+] EMBL CD184922             [                                                                                                                                                                                                                                                                                                                                                                       AACGTCGTTTCATGTGAGTAAAATAAGATTCAGATAAATATTGAGTGATTACATCATCCAGATAGATCATTCGTATTATTTCTACCATGGAAACAATTACAAAATATGAGGAATGCTTCTTGGTACAATTTGTTTAAAATTAAACAATCAATCACTATTTGATAAATTAAAAACTAAATATTCTTTTTGATGATGATGAAGTAAGAGATCATGCATAGTACATCAAAGTATATCGAAGATAGGAGAACAAGAAAGTTCAATATGATCTAACTCACTAAGTAATGATCTGTATACTCGCCTTTGAGCAGTGTTATTTATCTATGTAAAGGCTATTGTTGCTATCCCTCAGTTCAAACAGAAAAACAAGTAGGGAGGGACTTGAACCACAGAATTATTCATTGAAAATTTAACATCTTGGTCACTATAACCATCAATGTTCAGCAGCT]




>consensus_7641#0
CTCTCGTTCTCTTTGTTTTAATATGAAACATTGTACCAAAACACATAGATTCTTACGAAT
TCGTACGTACACCATTTAGTCACATATATATGTCACTACTCAAACCTCACCAATCTACGT
ACACTTAACGAAAATCATTTCAGCTATCATCAGTATTGAATCTAAAATGTATATAGATCA
TTGTGATTCACACATGGCAATAAGCAGACTTCATAAAGCAGAAAGAACGCAAATCTACAA
AATCATTAACATAATTTATCAAATACAGATTAACAGTTTGTTTATAGTGTTTTTGTAAAA
TATGATACACTCCAAGATCATCATCAACGACGATGTTGTTGATGCTGAGGATGTTGATAA
CGTCGTTTCATGTGAGTAAAATAAGATTCAGATAAATATTGAGTGATTACATCATCCAGA
TAGATCATTCGTATTATTTCTACCATGGAAACAATTACAAAATATGAGGAATGCTTCTTG
GTACAATTTGTTTAAAATTAAACAATCAATCACTATTTGATAAATTANAAACTAAATATT
CTTTTTGATGATGATGAAGTAAGAGATCATGCATAGTACATCANAGTATATCGAAGATAG
GAGAAACAGAAAATTCAATATGATCTAACTCACTAAGTAATGATCTGTATACTCGCCTTT
GAGCAGTGTTATTTATCTATGTAAAGGCTATTGTTGCTATCCCTCAGTTCAAACAGAAAA
ACAAGTAGGGAGGGACTTGAACCACAGAATTATTCATTGAAAATTTAACATCTTGGTCAC
TATAACCATCAATGTTCAGCAGCT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)