cluster # 795

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 795 cluster # 795 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_795#0 length = 295 sequences # 1

consensus_795#1 length = 268 sequences # 1

consensusID : consensus_795#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 295
fasta sequence

                              [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCACTCTTTGAAAAATGACACACTCACTCACACTCGTTTTCTTAGTAGCCATTGGTTACGCCCCCGCCCACACCACATCACATGTCTATTTGGGTGGGTACGGTGGCGGTTGCTATGGTTGCGATTGTGATATCGGTTATGGCGATTGTGGATATGGTGGAGGCTGTACT]

[+] EMBL BF936271             [GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCACTCTTTGAAAAATGACACACTCACTCACACTCGTTTTCTTAGTAGCCATTGGTTACGCCCCCGCCCACACCACATCACATGTCTATTTGGGTGGGTACGGTGGCGGTTGCTATGGTTGCGATTGTGATATCGGTTATGGCGATTGTGGATATGGTGGAGGCTGTACT]




>consensus_795#0
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGACCCACTCTTTGAAAAATGACACACTCACTCACACTCGTTTTCTTAGTAGCCATTGG
TTACGCCCCCGCCCACACCACATCACATGTCTATTTGGGTGGGTACGGTGGCGGTTGCTA
TGGTTGCGATTGTGATATCGGTTATGGCGATTGTGGATATGGTGGAGGCTGTACT

consensusID : consensus_795#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 268
fasta sequence

                              [ACACCAACAATTTGAAAAATGAAACAGTCACTCACACTCGTCTTCTTAGTAGCCATTGGTTACGCCACCGCCTACACCACATCACATGACTATTCGGGTGGGTACGGTGGCGGTTGCTATGGTAGCGATTGTGATAGCGGTTATGGCGATAGTGGATATGGTGGAGGCTGTACTGGCAGTGACTGTGGCGGCAGCTATGGTGGTGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGTAATTACGGTGAGCTNCAAAGTNTTTGTT]

[-] EMBL CD128898             [ACACCAACAATTTGAAAAATGAAACAGTCACTCACACTCGTCTTCTTAGTAGCCATTGGTTACGCCACCGCCTACACCACATCACATGACTATTCGGGTGGGTACGGTGGCGGTTGCTATGGTAGCGATTGTGATAGCGGTTATGGCGATAGTGGATATGGTGGAGGCTGTACTGGCAGTGACTGTGGCGGCAGCTATGGTGGTGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGTAATTACGGTGAGCTNCAAAGTNTTTGTT]




>consensus_795#1
ACACCAACAATTTGAAAAATGAAACAGTCACTCACACTCGTCTTCTTAGTAGCCATTGGT
TACGCCACCGCCTACACCACATCACATGACTATTCGGGTGGGTACGGTGGCGGTTGCTAT
GGTAGCGATTGTGATAGCGGTTATGGCGATAGTGGATATGGTGGAGGCTGTACTGGCAGT
GACTGTGGCGGCAGCTATGGTGGTGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGGT
AATTACGGTGAGCTNCAAAGTNTTTGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_795#0      GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 60
consensus_795#1      ------------------------------------------------------------
                                                                                 

consensus_795#0      GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 120
consensus_795#1      ------------------------------------------------------------
                                                                                 

consensus_795#0      GAGACCCACTCTTTGAAAAATGACACACTCACTCACACTCGTTTTCTTAGTAGCCATTGG 180
consensus_795#1      -ACACCAACAATTTGAAAAATGAAACAGTCACTCACACTCGTCTTCTTAGTAGCCATTGG 59
                      * *** **  ************ *** ************** *****************

consensus_795#0      TTACGCCCCCGCCCACACCACATCACATGTCTATTTGGGTGGGTACGGTGGCGGTTGCTA 240
consensus_795#1      TTACGCCACCGCCTACACCACATCACATGACTATTCGGGTGGGTACGGTGGCGGTTGCTA 119
                     ******* ***** *************** ***** ************************

consensus_795#0      TGGTTGCGATTGTGATATCGGTTATGGCGATTGTGGATATGGTGGAGGCTGTACT----- 295
consensus_795#1      TGGTAGCGATTGTGATAGCGGTTATGGCGATAGTGGATATGGTGGAGGCTGTACTGGCAG 179
                     **** ************ ************* ***********************     

consensus_795#0      ------------------------------------------------------------
consensus_795#1      TGACTGTGGCGGCAGCTATGGTGGTGGCTATGGTGGAGGTTGCAGTGGTGGAGATTGTGG 239
                                                                                 

consensus_795#0      -----------------------------
consensus_795#1      TAATTACGGTGAGCTNCAAAGTNTTTGTT 268