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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1152 fasta sequence
[ACATTAATGTGGGTAACTAGGTAAAGAAAGTAGATAGAAGTGGGTTGGATGACATTATGTAAACGGATTCAGTTAAAGTAAATAGTAGTAATAATAGCATTATTAATAATCAGCACACAGCGTATTTAGAAAATAAGATATGAACGATCTGGTGGAGATGATCATAGTGCACAATGATTTGAAAAAAAATGCTACAATAACACATTCCTGTTCGTTTGTGAAAATCTTAACCAGATATTATGACAAATATAAAGTTCGTATTAATGTCTCCCTTTTTTTAAGTAAATCAAATAGAAATAAGATGATGTCGATATTAGCTGAATTAGTAGAAAAATAAAATCGGTTACTATTTGCTTGCATTCGAGTAAACAAAATTTCCTGAATATATCTTCCTGATCAAGATATCCAACAAAAGAATTCGCATAGAGACAAACAAATTGTTCTTCATAGTAGTAAACATTTATCAATTACATTTTTTTCTGTTTACGGTCATTTGGAACCGGGAAGGAAATTTATTTTTAGAAAGAAAGCAAAAATCAAATTCATTATCCTATTTATCTTTTGCTTCTAAGTGACATTTTGACTTAGTTTTTGTACATTTATTGTGAACGATAAAACCTGTGAAACAAGATTGAATTCTCTATGAAGGAGAATATAACCGGGGGGGATATACATAACAGTAGAGTCGACATTCAATAATAGATAACGATAGTGTGACACAAGTNAAGAACCCTGAGAAACGATCGTTAACATACTGAAATTCAGAAAGAAGCAATTAGTCTTCGAATGGAAATTATAAAGAGAAGACAAGAATCGTTGTTGTAAAAAAAAGAATTACTTAATAGAAGAGACAAAATTGAAGTATACGTATAACGACTGGAATTTTCGAGAGAAAGATGATTGAACATATGTACGTACAGTACTTTGAAAATGGACAACATTGAGTGTTATAAGAATTAGAGAGGATTAGGTGATGGGGTTTACTTAAGCAATTCGTGGAAGCCAATTGTGAAATAGGAAAGCAATTATTAAAAAAAAAAACAATACCACAGGTATATCATTATCAAATAGTACTAATAGTTTCCCGAAATGCGATAACGAAGTTTCACACTGTCAACATACAAATGTAATACATACCACCAAAGTGATATT]
[+] EMBL CD197022 [ACATTAATGTGGGTAACTAGGTAAAGAAAGTAGATAGAAGTGGGTTGGATGACATTATGTAAACGGATTCAGTTAAAGTAAATAGTAGTAATAATAGCATTATTAATAATCAGCACACAGCGTATTTAGAAAATAAGATATGAACGATCTGGTGGAGATGATCATAGTGCACAATGATTTGAAAAAAAATGCTACAATAACACATTCCTGTTCGTTTGTGGAAATCTTAACCAGATATTATGACAAATATAAAGTTCGTATTAATGTCTCCCTTTTTTTAAGTAAATCAAATAGAAATAAGATGATGTCGATATTAGCTGAATTAGTAGAAAAATAAAATCGGTTACTATTTGCTTGCATTCGAGTAAACAAAATTTCCTGAATATATCTTCCTGATCAAGATATCCAACAAAAGAATTCG ]
[+] EMBL CD130375 [ GGGTAACTAGGTAAAGAAAGTAGATAGAAGTGGGTTGGATGATATTATGTAAACGGATTCAGTTAAAGTAAATAGTAGTAATAATAGCATTATTAATAATCAGCACACAGCGTATTTAGACAATAAGATATGAACGATCTGGTGGAGATGATCATAGTGCACAATGATTTGAAAAAAAATGCTACAATAACACATTCCTGTTCGTTTGTGAAAATCTTATCTAGAT TTATGACAAATATAAAGTTCGTATTACTGTC ]
[+] EMBL CD117093 [ AGATAGAAGTGGGTTGGATGACATTATGTAAACGGATTCAGTTAAAGTAAATAGTAGTAATAATAGCATTATTAATAATCAGCACACAGCGTATTTAGAAAATAAGATATGAACGATCTGGTGGAGATGATCATAGTGCACAATGATTTGAAAAAAAATGCTACAATAACACATTCCTGTTCGTTTGTGAAAATCTTAACCAGATATTATGACAAATATAAAGTTCGTATTAATGTCTCCCTTTTTTTAAGTAAATCAAATAGAAATAAGATGATGTCGATATTAGCTGAATTAGTAGAAAAATAAAATCGGTTACTATTTGCTTGCATTCGAGTAAACAAAATTTCCTGAATATATCTTCCTGATCAAGATATCCAACAA ]
[+] EMBL CD131313 [ AAATAGAAATAAGATGATGTCGATATTAGCTGAATTAGTAGAAAAATAAAATCGGTTACTATTTGCTTGCATTCGAGTAAACAAAATTTCCTGAATATATCTTCCTGATCAAGATATCCAACAAAAGAATTCGCATAGAGACAAACAAATTGTTCTTCATAGTAGTAAACATTTATCAATTACATTTTTTTCTGTTTACGGTCATTTGGAACCGGGAAGGAAATTTATTTTTAGAAAGAAAGCAAAAATCAAATTCATTATCCTATTTATCTTTTGCTTCTAAGTGACATTTTGACTTAGTTTTTGTACATTTATTGTGAACGATAAAACCTGTGAAACAAGATTGAATTCTCTATGAAGGAGAATATAACCGGGGGGGATATACATAACAGTAGAGTCGACATTCAATAATAGATAACGATAGTGTGACACAAGTNAAGAACCCTGAGAAACGATCGTTAACATACTGAAATTCAGAAAGAAGCAATTAGTCTTCGAATGGAAATTATAAAGAGAAGACAAGAATCGTTGTTGTAAAAAAAAG ]
[-] EMBL CD131350 [ AATAGAAATAAGATGATGTCGATATTAGCTGAATTAGTAGAAAAATAAAATCGGTTACTATTTGCTTGCATTCGAGTAAACAAAATTTCCTGAATATATCTTCCTGATCAAGATATCCAACAAAAGAATTCGCATAGAGACAAACAAATTGTTCTTCGTAGTAGTAAACATTTATCAATTACATTTTTTTCTGTTTACGGTCATTTGGAACCGGGAAGGAAATTTATTTTTAGAAAGAAAGCAAAAATCAAATTCATTATCCTATTTATCTTTTGCTTCTAAGTGACATTTTGACTTAGTTTTTGTACATTTATTGTGAACGATAAAACCTGTGAAACAAGATTGAATTCTCTATGAAGGAGAATATAACCGGGGGGGATATACATAACAGTAGAGTCGACATTCAATAATAGATAACGA ]
[-] EMBL CD145745 [ AACAAGATTGAATTCTCTATGAAGGAGAATATAACCGGGGGGGATATACATAACAGTAGAGTCGACATTCAATAATAGATAACGATAGTGTGACACAAGTAAAGAACCCTGAGAAACGATCGTTAACATACTGAAATTCAGAAAGAAGCAATTAGTCTTCGAATGGAAATTATAAAGAGAAGACAAGAATCGTTGTTGTAAATCAAAGAATTACTTAATAGAAGAGACAAAATTGAAGTATACGTATAACGACTGGAATTTTCGAGAGAAAGATGATTGAACATATGTACGTACAGTACTTTGAAAATGGACAACATTGAGTGTTATAAGAATTAGAGAGGATTAGGTGATGGGGTTTACTTAAGCAATTCGTGGAAGCCAATTGTGAAATAGGAAAGCAATTATTAAAAAAAAAAACAATACCACAGGTATATCATTATCAAATAGTACTAATAGTTTCCCGAAATGCGATAACGAAGTTTCACACTGTCAACATACAAATGTAATACATACCACCAAAGTGATATT]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||