cluster # 8474

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Schistosoma mansoni
cluster # 8474 cluster # 8474 Sequences # 7 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8474#0 length = 1231 sequences # 2
consensus_8474#1 length = 541 sequences # 1

consensus_8474#2 length = 397 sequences # 1
consensus_8474#3 length = 323 sequences # 1
consensus_8474#4 length = 260 sequences # 2

consensusID : consensus_8474#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1231
fasta sequence

                              [GGGCCATATTCGGCCGCAGCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCTGTAAAATGTCGTTCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATAATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTCGACCCTCTTCGTAATTTTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTCGATAGCTGGAATTCACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTTTCACACCCATGATTAACTCGACTGCATTTCTCATTAACATGAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTGTTCAATTTTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTTGGTGCAGCCCTTCTGCGATGCAGTCGACCTGAATCTCGGTTGCCCCCAAGGAATAGCTAAAAGAGGGCATTATGGTGCGTTTTTGCAAGATGAGTGGAATTCTCTTAAGGATATTATTAGCCGCGCTTCGTTAGAGCTTAATGTTCCCGTCACTTGCAAAATCCGAATCTTTAGTGACGTTGAGCGAACTGTTCAGTATGCANAACTTCTCGAAGCTGCAGGGGCTTCTATGCTTACAGTTCACGGACGCACCAGAGAAATGAAAGGTCANAAAACTGGACTAGCTGACTGGAATCAAATTAGGGCAGTAAAAGAAGCCGTAAAAATACCCTGTTATTGCCAATGGGATATTCAGTATTTATCAGATGTTCATCAGTGTTTGGACTCACCAAAAGCCGACGCAGTTATGAGTGCAGGTTTCTGTATATCCAAAATGTTGTTTATTTCATTTTTTTGAATGCATTTCTTTAGAGCTACAGTCCGCCATATGTNTAGTTCTAGTTTTCGTTAGGATGAAATCGATAACTACTTAATTGGATTTGCAGACCTAGATTTCTTTACCCATTATTTCCTCTGGCTANGATGGTTGNATCACCGCCATCCCTGTTTCCTATATGTTATGATCTGNGAAAAGTATTCTACCTTAATACTATTTCTCGATTAATCTGCTGACGCCACTTATCTTTTTCGATTATACATTGAGAATATT]

[+] EMBL CD081732             [GGGCCATATTCGGCCGCAGCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCTGTAAAATGTCGTTCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATAATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTCGACCCTCTTCGTAATTTTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTCGATAGCTGGAATTCACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTTTCACACCCATGATTAACTCGACTGCATTTCTCATTAACATGAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTGTTCAATTTTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTTGGTGCAGCCCTTCTGCGATGCAGTCGACCTGAATCTCGGTTGCCCCCAAGGAATAGCTAAAAGAGGGCATTATGGTGCGTTTTTGCAAGATGAGTGGAATTCTCTTAAGGATATTATTAGCCGCGCTTCGTTAGAGCTTAATGTTCCCGTCACTTGCAAAATCCGAATCTTTAGTGACGTTGAGCGAACTGTTCAGTATGCANAACTTCTCGAAGCTGCAGGGGCTTCTATGCTTACAGTTCACGGACGCACCAGAGAAATGAAAGGTCANAAAACTGGACTAGCTGACTGGAATCAAATTAGGGCAGTAAAAGAAGCCGTAAAAATACCCTGTTATTGCCAATGGGATATTCAGTATTTATCAGATGTTCATCAGTGTTTGGACTCACCAAAAGCCGACGCAGTTATGAGTGCAGGTTTCTGTATATCCAAAATGTTGTTTATTTCATTTTTTTGAATGCATTTCTTTAGAGCTACAGTCCGCCATATGTNTAGTTCTAGTTTTCGTTAGGATGAAATCGATAACTACTTAATTGGATTTGCAGACCTAGATTTCTTTACCCATTATTTCCTCTGGCTANGATGGTTGNATCACCGCCATCCCTGTTTCCTATATGTTATGATCTGNGAAAAGTATTCTACCTTAATACTATTTCTCGATTAATCTGCTGACGCCACTTATCTTTTTCGATTATACATTGAGAATATT]
[+] EMBL CD185649             [                                                                                                                                                          TTCGACCCTCTTCGTAATTTTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTCGATAGCTGGAATTCACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTTTCACACCCATGATTAACTCGACTGCATTTCTCATTAACGTGAAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_8474#0
GGGCCATATTCGGCCGCAGCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCTGTAAAA
TGTCGTTCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATAATCAGT
TTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTCGACCCTCTTCGTAATTTTGCGTC
AGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCT
TGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTCGATAGCTGGAATTCACCTAA
ATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAA
ATATGGAGTGCAGCTAACTTTCACACCCATGATTAACTCGACTGCATTTCTCATTAACAT
GAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTGTTCAATT
TTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTTGGTGCAGCCCTTCTGCGA
TGCAGTCGACCTGAATCTCGGTTGCCCCCAAGGAATAGCTAAAAGAGGGCATTATGGTGC
GTTTTTGCAAGATGAGTGGAATTCTCTTAAGGATATTATTAGCCGCGCTTCGTTAGAGCT
TAATGTTCCCGTCACTTGCAAAATCCGAATCTTTAGTGACGTTGAGCGAACTGTTCAGTA
TGCANAACTTCTCGAAGCTGCAGGGGCTTCTATGCTTACAGTTCACGGACGCACCAGAGA
AATGAAAGGTCANAAAACTGGACTAGCTGACTGGAATCAAATTAGGGCAGTAAAAGAAGC
CGTAAAAATACCCTGTTATTGCCAATGGGATATTCAGTATTTATCAGATGTTCATCAGTG
TTTGGACTCACCAAAAGCCGACGCAGTTATGAGTGCAGGTTTCTGTATATCCAAAATGTT
GTTTATTTCATTTTTTTGAATGCATTTCTTTAGAGCTACAGTCCGCCATATGTNTAGTTC
TAGTTTTCGTTAGGATGAAATCGATAACTACTTAATTGGATTTGCAGACCTAGATTTCTT
TACCCATTATTTCCTCTGGCTANGATGGTTGNATCACCGCCATCCCTGTTTCCTATATGT
TATGATCTGNGAAAAGTATTCTACCTTAATACTATTTCTCGATTAATCTGCTGACGCCAC
TTATCTTTTTCGATTATACATTGAGAATATT

consensusID : consensus_8474#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 541
fasta sequence

                              [TTCGACCTAATCTTTTAGGACGTGTCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCTGTAAAATGTCGATCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATAATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTTCGACCCTCTTCGTAATTTTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTTGATAGCTGGAATTCACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTGTCACACCCATGATTAACTCGACTGCATTTCTCATTAACATGAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTGTTCAATTNTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTNGGTGCAGCCCTT]

[+] EMBL AI975400             [TTCGACCTAATCTTTTAGGACGTGTCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCTGTAAAATGTCGATCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATAATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTTCGACCCTCTTCGTAATTTTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTTGATAGCTGGAATTCACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTGTCACACCCATGATTAACTCGACTGCATTTCTCATTAACATGAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTGTTCAATTNTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTNGGTGCAGCCCTT]




>consensus_8474#1
TTCGACCTAATCTTTTAGGACGTGTCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCT
GTAAAATGTCGATCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATA
ATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTTCGACCCTCTTCGTAATT
TTGCGTCAGCGGACCTCCAGAGAAAGCACGTTCTGCAAAGACCAGAAGTTTCACTGTCTT
GTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAATGAGTCTCCTTGATAGCTGGAATT
CACCTAAATACGTTTTAGCACCTATGGTTGATGGGAGTGAACTTGCCTGGAGGATGCTCG
GTCGTAAATATGGAGTGCAGCTAACTGTCACACCCATGATTAACTCGACTGCATTTCTCA
TTAACATGAAATACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGATCGACCACTTATTG
TTCAATTNTGTGCTAATTCTCCAGATACGTTCGTTAGGTGTGCTAAGTNGGTGCAGCCCT
T

consensusID : consensus_8474#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [AAAGCAACGTAACAAAGCTTCTCCTTTATATCTCGCACAATTTCACGTTCTGCAGTAGTAGTAAAACTGTAACCTCTCTCAGTCAAGATCTTCATCATATAGTCGGTAAGATCTCCACCAGCAAGGTCCAGACGCAAAATCGCATGAGGCAATGCATAACCTTCATAGATCGGAACTGTGTGGGTCACACCATCACCCGAGTCCAACACTATACCAGTTGTACGACCAGATGCATACAGTGACAACACCGCCTGAATAGCAACATACATAGCTGGCACATTAAACGTCTCAAACATGATCTGTGTCATCTTCTCACGATTGGCTTTCGGGTTCAGTGGAGCTTCTGTCAACAACACTGGGTGTTCCTCTGGAGCCACTCGCAACTCGGTGTAGAATG]

[+] EMBL CD163645             [AAAGCAACGTAACAAAGCTTCTCCTTTATATCTCGCACAATTTCACGTTCTGCAGTAGTAGTAAAACTGTAACCTCTCTCAGTCAAGATCTTCATCATATAGTCGGTAAGATCTCCACCAGCAAGGTCCAGACGCAAAATCGCATGAGGCAATGCATAACCTTCATAGATCGGAACTGTGTGGGTCACACCATCACCCGAGTCCAACACTATACCAGTTGTACGACCAGATGCATACAGTGACAACACCGCCTGAATAGCAACATACATAGCTGGCACATTAAACGTCTCAAACATGATCTGTGTCATCTTCTCACGATTGGCTTTCGGGTTCAGTGGAGCTTCTGTCAACAACACTGGGTGTTCCTCTGGAGCCACTCGCAACTCGGTGTAGAATG]




>consensus_8474#2
AAAGCAACGTAACAAAGCTTCTCCTTTATATCTCGCACAATTTCACGTTCTGCAGTAGTA
GTAAAACTGTAACCTCTCTCAGTCAAGATCTTCATCATATAGTCGGTAAGATCTCCACCA
GCAAGGTCCAGACGCAAAATCGCATGAGGCAATGCATAACCTTCATAGATCGGAACTGTG
TGGGTCACACCATCACCCGAGTCCAACACTATACCAGTTGTACGACCAGATGCATACAGT
GACAACACCGCCTGAATAGCAACATACATAGCTGGCACATTAAACGTCTCAAACATGATC
TGTGTCATCTTCTCACGATTGGCTTTCGGGTTCAGTGGAGCTTCTGTCAACAACACTGGG
TGTTCCTCTGGAGCCACTCGCAACTCGGTGTAGAATG

consensusID : consensus_8474#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 323
fasta sequence

                              [GGTAGCATCTAAAAACAACTGGAAAGGATTGTCAAGGACTGAGTTAGATGGAGAATCCTGGTGGGAGGCCTATGCTCCTCCATGAGAGGTAACAGGCGTAAGTAAGTAAGTCTTAGTAATATATATAGATCACCAGTTCACTTAAATACTTCTGATTATCAGCTTGGTTTTGTCGAATCGTAGTCAAATCATGTAAAACCTTATTGCTGTGGATATCCTTGGAACCATTCTCATACATCAAGGATCGAACGACCGGACAACCGTAATCATTCTAATTCCTCAACGGCGTATAATTTCCAGAAGCCAGAGAAAACTAGTCAAAA]

[+] EMBL CD090200             [GGTAGCATCTAAAAACAACTGGAAAGGATTGTCAAGGACTGAGTTAGATGGAGAATCCTGGTGGGAGGCCTATGCTCCTCCATGAGAGGTAACAGGCGTAAGTAAGTAAGTCTTAGTAATATATATAGATCACCAGTTCACTTAAATACTTCTGATTATCAGCTTGGTTTTGTCGAATCGTAGTCAAATCATGTAAAACCTTATTGCTGTGGATATCCTTGGAACCATTCTCATACATCAAGGATCGAACGACCGGACAACCGTAATCATTCTAATTCCTCAACGGCGTATAATTTCCAGAAGCCAGAGAAAACTAGTCAAAA]




>consensus_8474#3
GGTAGCATCTAAAAACAACTGGAAAGGATTGTCAAGGACTGAGTTAGATGGAGAATCCTG
GTGGGAGGCCTATGCTCCTCCATGAGAGGTAACAGGCGTAAGTAAGTAAGTCTTAGTAAT
ATATATAGATCACCAGTTCACTTAAATACTTCTGATTATCAGCTTGGTTTTGTCGAATCG
TAGTCAAATCATGTAAAACCTTATTGCTGTGGATATCCTTGGAACCATTCTCATACATCA
AGGATCGAACGACCGGACAACCGTAATCATTCTAATTCCTCAACGGCGTATAATTTCCAG
AAGCCAGAGAAAACTAGTCAAAA

consensusID : consensus_8474#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 260
fasta sequence

                              [GTAGGAAACTTAGTATATGAATGATTGTATTGTGGTCTAACGTTAAAGTGACTTGGATGTGATTATGGAACTCGTTTGGAAACGTATTTTTGGGGAGTCAATAAATCTTCATTGCACCAGTCTTTCGTGTTCGCACTTTGTATCGCGGGAAGTGTAGTGGGTTCCCATTTCTCTTTACACGAAGTTACTTTACTTACTTACGCCTGTTATCCCTCGTGGAGGAGCACAGGCCACCCACAAGTGCAATATAAGTGAAATAG]

[+] EMBL CD199188             [GTAGGAAACTTAGTATATGAATGATTGTATTGTGGTCTAACGTTAAAGTGACTTGGATGTGATTATGGAACTCGTTTGGAAACGTATTTTTGGGGAGTCAATAAATCTTCATTGCACCAGTCTTTCGTGTTCGCACTTTGTATCGCGGGAAGTGTAGTGGGTTCCCATTTCTCTTTACACGAAGTTACTTTACTTACTTACGCCTGTTATCCCTCGTGGAGGAGCACAGGCCACCCACAAGTGCAATATAAGTGAAATAG]
[+] EMBL CD199245             [           AGTATATGAATGATTGTATTGTGGTCTAACGTTAAAGTGACTTGGATGTGATTATGGAACTCGTTTGGAAACGTATTTTTGGGGAGTCAATAAATCTTCATTGCACCAGTCTTTCGTGTTCGCACTTTGTATCGCGGGAAGTGTAGTGGGTTCCCATTTCTCTTTACACGAAGTTAC TTACTTACTTACGCCTGTTATCCCTCGTGGAGGAGCACAGG                              ]




>consensus_8474#4
GTAGGAAACTTAGTATATGAATGATTGTATTGTGGTCTAACGTTAAAGTGACTTGGATGT
GATTATGGAACTCGTTTGGAAACGTATTTTTGGGGAGTCAATAAATCTTCATTGCACCAG
TCTTTCGTGTTCGCACTTTGTATCGCGGGAAGTGTAGTGGGTTCCCATTTCTCTTTACAC
GAAGTTACTTTACTTACTTACGCCTGTTATCCCTCGTGGAGGAGCACAGGCCACCCACAA
GTGCAATATAAGTGAAATAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8474#0      ---GGGCCA---TATTCGGCCGCAGCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCT 54
consensus_8474#1      TTCGACCTAATCTTTTAGGACGTGTCGTGATCTGAGCTCGTGGGAAGTGCATATTTGGCT 60
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      GTAAAATGTCGTTCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATA 114
consensus_8474#1      GTAAAATGTCGATCTGCTTCGTGCAGATAGTAATAACCTCGGTTTAACGCTTAAAGGATA 120
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      ATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTT-CGACCCTCTTCGTAATT 173
consensus_8474#1      ATCAGTTTGTCTTATTTTCGCTCGTGTCGTCGCAGTTTTGTTTCGACCCTCTTCGTAATT 180
consensus_8474#3      ---------------------------------------------GGTAGCATCTAAAAA 15
consensus_8474#4      ---------------------------------------------------GTAGGAAAC 9
consensus_8474#2      ----------------------------AAAGCAACGTAACAAAGCTTCTCCTTTATATC 32
                                                                          *    *  

consensus_8474#0      TTGCGTCAGCGGACCTCCA--GAGAAAGCACGTTCTGCAAAG-ACCAGAAGTTTCACTGT 230
consensus_8474#1      TTGCGTCAGCGGACCTCCA--GAGAAAGCACGTTCTGCAAAG-ACCAGAAGTTTCACTGT 237
consensus_8474#3      CAACTGGAAAGGATTGTCA--AGGACTG--AGTTAGATGGAG-AATCCTGGTGGGAGGCC 70
consensus_8474#4      TTAGTATA-TGAATGATTG--TATTGTGGTCTAACGTTAAAGTGACTTGGATGTGATTAT 66
consensus_8474#2      TCGCACAATTTCACGTTCTGCAGTAGTAGTAAAACTGTAACCTCTCTCAGTCAAGATCTT 92
                             *    *                                          *    

consensus_8474#0      CTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAA---TGAGTCTCCTCGATAGCT 287
consensus_8474#1      CTTGTCTGCTTGTTTTTTGTATCCGACGTTAAATTTTAA---TGAGTCTCCTTGATAGCT 294
consensus_8474#3      TATGCTCCTCCATGAGAGGTAACAGGCGTAAG---TAAG---TAAGTCTTAGTAATATAT 124
consensus_8474#4      GGAACTCGTTTG-GAAACGTATTTTTGGGGAG---TCAA---TAAATCTTCATTGCACCA 119
consensus_8474#2      CATCATATAGTCGGTAAGATCTCCACCAGCAAGGTCCAGACGCAAAATCGCATGA-GGCA 151
                                         *          *      *      *               

consensus_8474#0      GGAATTCACCTAAATACGTTTTAGCACCTATGGT-------TGATGGGAGTGAACTTGCC 340
consensus_8474#1      GGAATTCACCTAAATACGTTTTAGCACCTATGGT-------TGATGGGAGTGAACTTGCC 347
consensus_8474#3      ATAGATCACC--AGTTCACTTAAATACTTCTGAT-------TA-------TCAGCTTGGT 168
consensus_8474#4      GTCTTTCGTGTTCGCACTTTGTATCGCGGGAAGTG------TAGTGGGTTCCCATTTCTC 173
consensus_8474#2      ATGCATAACCTTCATAGATCGGAACTGTGTGGGTCACACCATCACCCGAGTCCAACACTA 211
                           *                *          *       *                  

consensus_8474#0      TGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTTTCACACCCATGATTAACTCG 400
consensus_8474#1      TGGAGGATGCTCGGTCGTAAATATGGAGTGCAGCTAACTGTCACACCCATGATTAACTCG 407
consensus_8474#3      TT-----TGTCGAATCGTAGTCAAATCATGTA---AAACCTTATTGCTGTGGATATCCTT 220
consensus_8474#4      TTTACACGAAGTTACTTTACTTACTTACGCCTGTTATCCCTCGTGGAGGAGCACAGGCCA 233
consensus_8474#2      TACCAGTTGTACGACCAGATGCATACAGTGACAACACCGCCTGAATAGCAACATACATAG 271
                      *                 *   *            *                  *     

consensus_8474#0      ACTGCATTTCTCATTAACATGAAAT-ACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGA 459
consensus_8474#1      ACTGCATTTCTCATTAACATGAAAT-ACCGCCGCAGTTGCTTGCAGTTCGCCTCAGAAGA 466
consensus_8474#3      GGAACCATTCTCAT--ACATCAAGG-ATCG----AACGACCGGACAACCGT-------AA 266
consensus_8474#4      CCCACAAGTGCAATATAAGTGAAAT-AG-------------------------------- 260
consensus_8474#2      CTGGCACATTAAACGTCTCAAACATGATCTGTGTCATCTTCTCACGATTGGCTTTCGGGT 331
                          *   *   *        *    *                                 

consensus_8474#0      TCGACCACTTATTGTTCAATTTTGT--GCTAATTCTCCAGATACGTTCGTTAGGTGTGCT 517
consensus_8474#1      TCGACCACTTATTGTTCAATTNTGT--GCTAATTCTCCAGATACGTTCGTTAGGTGTGCT 524
consensus_8474#3      TCATT--CTAATTCCTCAACGGCGT--A-TAATT-TCCAGAAGCCAGAGAAAACTAGTCA 320
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      TCAGTGGAGCTTCTGTCAACAACACTGGGTGTTCCTCTGGAGCCACTCGCAACTCGGTGT 391
                                                                                  

consensus_8474#0      AAGTTGGTGCAGCCCTTCTGCGATGCAGTCGACCTGAATCTCGGTTGCCCCCAAGGAATA 577
consensus_8474#1      AAGTNGGTGCAGCCCTT------------------------------------------- 541
consensus_8474#3      AAA--------------------------------------------------------- 323
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      AGAATG------------------------------------------------------ 397
                                                                                  

consensus_8474#0      GCTAAAAGAGGGCATTATGGTGCGTTTTTGCAAGATGAGTGGAATTCTCTTAAGGATATT 637
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      ATTAGCCGCGCTTCGTTAGAGCTTAATGTTCCCGTCACTTGCAAAATCCGAATCTTTAGT 697
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      GACGTTGAGCGAACTGTTCAGTATGCANAACTTCTCGAAGCTGCAGGGGCTTCTATGCTT 757
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      ACAGTTCACGGACGCACCAGAGAAATGAAAGGTCANAAAACTGGACTAGCTGACTGGAAT 817
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      CAAATTAGGGCAGTAAAAGAAGCCGTAAAAATACCCTGTTATTGCCAATGGGATATTCAG 877
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      TATTTATCAGATGTTCATCAGTGTTTGGACTCACCAAAAGCCGACGCAGTTATGAGTGCA 937
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      GGTTTCTGTATATCCAAAATGTTGTTTATTTCATTTTTTTGAATGCATTTCTTTAGAGCT 997
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      ACAGTCCGCCATATGTNTAGTTCTAGTTTTCGTTAGGATGAAATCGATAACTACTTAATT 1057
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      GGATTTGCAGACCTAGATTTCTTTACCCATTATTTCCTCTGGCTANGATGGTTGNATCAC 1117
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      CGCCATCCCTGTTTCCTATATGTTATGATCTGNGAAAAGTATTCTACCTTAATACTATTT 1177
consensus_8474#1      ------------------------------------------------------------
consensus_8474#3      ------------------------------------------------------------
consensus_8474#4      ------------------------------------------------------------
consensus_8474#2      ------------------------------------------------------------
                                                                                  

consensus_8474#0      CTCGATTAATCTGCTGACGCCACTTATCTTTTTCGATTATACATTGAGAATATT 1231
consensus_8474#1      ------------------------------------------------------
consensus_8474#3      ------------------------------------------------------
consensus_8474#4      ------------------------------------------------------
consensus_8474#2      ------------------------------------------------------