cluster # 9230

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Schistosoma mansoni
cluster # 9230 cluster # 9230 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9230#0 length = 637 sequences # 9
consensusID : consensus_9230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 637
fasta sequence
                              [ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG-CAATGCGGACAATAGAATTTCTCCTGCCAAACAGTAACACGATCACCAGGACGGAATGTGATCGAACACTTATTA]

[+] EMBL CD161187             [ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGTTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTANGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGACTTTCTCCTGCCAAACAGTAACACGATCACCAGGACGGAATGTGATCGAACACTTATT ]
[+] EMBL CD161152             [ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGACCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGGTTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATGNNCATGCGGAC ATAGAAATTCTNCTGCC AACAGTAACACGATCACCANGACGGAATGTGATCGAACACTTATT ]
[+] EMBL CD161405             [ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAGTTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGCGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTANGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG NCATGCGGACAATAGAATTTCTCCTGCCA                                              ]
[+] EMBL CD161189             [ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTANGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGAATTTCTCCTGCCAAACA                                          ]
[-] EMBL CD161336             [                  TAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTGATTATTCAATGNCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATGTACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGAATTTCTCCTGCCAAACAGTAACACGATCACCAGGACGGAATGTGATCGAACACTTATTA]
[-] EMBL CD161094             [                                             CGGTATGGGGATTTGATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCGTCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAGATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGAATTTCTCCTGCCAAACAGTAACACGATCACCAGGACGGAATGTGATCGAACACTTATTA]
[+] EMBL CD190064             [                                                                                                                                                                                        GTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATTCACATAAACGATCTCCTAGACCAAAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGAATTTCTCCTGCCAAACAGT                                        ]
[+] EMBL CD133620             [                                                                                                                                                                                        GTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAAATTGGCTGATCCACATAAACGATCGCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTCCTTGGATACATGGAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGG                                                                                                                               ]
[+] EMBL CD189056             [                                                                                                                                                                                                                                                                                                                          GACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTTTTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTATTGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATCATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGCAGAACAGCATACTTGATTGATG CAATGCGGACAATAGAATTTCTCCTGCCAAACAGT                                        ]




>consensus_9230#0
ATTTAAAGTTGTAGTGGATAGATTACGTTTATACCGATCATTATTCGGTATGGGGATTTG
ATTATTCAATTGCATATAAGATTGATTTAAATATCGACCATAGTTAGAGCTTGGTACTCG
TCCACATAAACTGTGTCTAGACAGATGGAAAGACAGAGTGTGAGACTTCTCCTGACGTAG
ATTAGTTTTATCCTGACCAGAACTTCCATCATACAAATCCCTATAGTTTGAATCGTCCAA
ATTGGCTGATTCACATAAACGATCTCCTAGACCAGAATCTGTGCTTAGGTATCCTCTCTC
CTTGGATACATGAAGACCATTTTGTTCTGTGACAGGTTTTCGAAGAATAGATTTTGATTT
TTGAGGAAGTCCAGCAGAAGGAATGCATGAAAAATCGTTTTGCGGTTGGTTCATCTCTAT
TGGCTGCTCATGGATATACTGTGATGATGCCATATCACTGGCACTGACACAACCTTCATC
ATCAGTGACAGACAAAGGTGTCTGGAGAAGGTTCTTACTAGGAACACTACCAACAGTTGC
AGAACAGCATACTTGATTGATGCAATGCGGACAATAGAATTTCTCCTGCCAAACAGTAAC
ACGATCACCAGGACGGAATGTGATCGAACACTTATTA
clustalw multiple alignements is not computed in this case