cluster # 9487

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Schistosoma mansoni
cluster # 9487 cluster # 9487 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9487#0 length = 923 sequences # 4
consensus_9487#1 length = 638 sequences # 2

consensus_9487#2 length = 576 sequences # 1
consensus_9487#3 length = 554 sequences # 2
consensus_9487#4 length = 510 sequences # 1

consensusID : consensus_9487#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 923
fasta sequence

                              [ACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGTGCACGCAGTTTTGCAGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCAAACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATCCAAAATGCTATTGGTGCAACTGAAGATGATGTAGTGATGTCTGGGGGGGAAGATGACGATGATTATAGTAGTGACATTGATGTGAATCAAGATAGCCAACAAGCACATAGTCGTTCTGAAACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGGCTAGTTTGGAATATTCTCTTGAGTGTGACAAGATGTCAGTTACAAATGATGCCAATACAGCTCGTACTGAGGCTGGCTCTGTAACTCCTAATGTGTTCCTGCCTGATTTCATGTTGAATATGTGTAAATTCCTTGAAAAACTTTTACCATTCGGATCTCATACTACTGAAGCAATGTGCCCACAATTTGTTAGTCAAGGTGGATTACAAGCTTTATGTGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGCATCATTGTGTAAAATTTTCGAAGACTTAGCCAATTCAGTTAATTTAACCGATGTAACTAAACCTTTGTTCCAGTGCTTGGAATCTTCATTGGATAAACTATCTGTTCTACACACTTCTAACTATCCAATGAGTTCTATACTCTTACGTGAATATTTGTCTGGTGAACGAGAAGTGTTGCATGAATTGGTGACAATCGCTTCAGTAGTTTGTATTTTAGTACAAATGATTGAGCATATTAAATCAGAAATTCGTTTGTCATTGGCTAGTAGTTGGTTATCTCAGAACTGTTTGAAAACATTGGGGCGTCTATATTTAGGAGTTTCTT]

[-] EMBL CD169657             [ACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGTGCACGCAGTTTTGCAGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCAAACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATCCAAAATGCTATTGGTGCAACTGAAGATGATGTAGTGATGTCTGGGGGGGAAGATGACGATGATTATAGTAGTGACATTGATGTGAATCAAGATAGCCAACAAGCACATAGTCGTTCTGAAACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGGCTAGTTTGGAATATTCTCTTGAGTGTGACAAGATGTCAGTTACAAATGATGCCAATACAGCTCGTACTGAGGCTGGCTCTGTAACTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD157714             [                                                                                                                                                                                                                                                                                                                                    TAGTTTGGAATATTCTCTTGAGTGTGACAAGATGTCAGTTACAAATGATGCCAATACAGCTCGTACTGAGGCTGGCTCTGTAACTCCTAATGTGTTCCTGCCTGATTTCATGTTGAATATGTGTAAATTCCTTGAAAAACTTTTACCATTCGGATCTCATACTACTGAAGCAATGTGCCCACAATTTGTTAGTCAAGGTGGATTACAAGCTTTATGTGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGCATCATTGTGT AAATTTTC                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD146861             [                                                                                                                                                                                                                                                                                                                                                                                                            TGGCTCTGTAACTCATAATGTGTTCCTGCCTGATTTCATGTTGAATATGTGTAAATTCCTTGAAAAACTTTTACCATTCGGATCTCATACTACTGAAGCAATGTGCCCACAATTTGTTAGTCAAGGTGGATTACAAGCTTTATGTGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGCATCATTGTGTAAAATTTTCGAAGACTTAGCCAATTCAGTTAATTTAACCGATGTAACTAAACCTTTGTTCCAGTGCTTGGAATCTTCATTGGATAAACTATCTGTTCTACACACTTCTAACTATCCAATGAGTTCTATACTCTTACGTGAATATTTGTCTGGTGAACGAGAAGTGTTGCATGAATTGGTGACAATCGCTTCAGTAGTTTGTATTTTAGTACAAATGATTGAGCATATTAAATCAGAAATTCGTTTGTCATTGGCTAGTAGTTGGTTATCTCAGAACTGTTTGAAAACATTGGGGCGTCTATATTTAGGAGTTTCTT]
[-] EMBL CD146823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCAAGGTGGATTACAAGCTTTATGTGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGCATCATTGTGTAAAATTTTCGAAGACTTAGCCAATTCAGTTAATTTAACCGATGTAACTAAACCTTTGTTCCAGTGCTTGGAATCTTCATTGGATAAACTATCTGTTCTACACACTTCTAACTATCCAATGAGTTCTATACTCTTACGTGAATATTTGTCTGGTGAACGAGAAGTGTTGCATGAATTGGTGACAATCGCTTCAGTAGTTTGTATTTTAGTACAAATGATTGAGCATATTAAATCAGAAATTCGTTTGTCATTGGCTAGTAGTTGGTTATCTCAGAACTGTTTGAAAACATTGGGGCGTCTATATTTAGGAGTT    ]




>consensus_9487#0
ACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGTGCACGCAGTTTTGC
AGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCA
AACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATCCAAAATGCTATTGGTGCAACTGA
AGATGATGTAGTGATGTCTGGGGGGGAAGATGACGATGATTATAGTAGTGACATTGATGT
GAATCAAGATAGCCAACAAGCACATAGTCGTTCTGAAACTGTACAAGCTGGTACCATTGT
ATCTGGAGCATCAATTTCCATGGCTAGTTTGGAATATTCTCTTGAGTGTGACAAGATGTC
AGTTACAAATGATGCCAATACAGCTCGTACTGAGGCTGGCTCTGTAACTCCTAATGTGTT
CCTGCCTGATTTCATGTTGAATATGTGTAAATTCCTTGAAAAACTTTTACCATTCGGATC
TCATACTACTGAAGCAATGTGCCCACAATTTGTTAGTCAAGGTGGATTACAAGCTTTATG
TGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGCATC
ATTGTGTAAAATTTTCGAAGACTTAGCCAATTCAGTTAATTTAACCGATGTAACTAAACC
TTTGTTCCAGTGCTTGGAATCTTCATTGGATAAACTATCTGTTCTACACACTTCTAACTA
TCCAATGAGTTCTATACTCTTACGTGAATATTTGTCTGGTGAACGAGAAGTGTTGCATGA
ATTGGTGACAATCGCTTCAGTAGTTTGTATTTTAGTACAAATGATTGAGCATATTAAATC
AGAAATTCGTTTGTCATTGGCTAGTAGTTGGTTATCTCAGAACTGTTTGAAAACATTGGG
GCGTCTATATTTAGGAGTTTCTT

consensusID : consensus_9487#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 638
fasta sequence

                              [TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAAATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGCAACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGAAGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATCCGACTTGTAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGAGTATGATCTTCTTGACTGCCAACACTAACTAAATATTGAT-CGTTCGGNC]

[+] EMBL CD096248             [TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAAATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGCAACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGAAGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATCCGACTTGTAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGAGTATGATCTTCTTGACTGCCAACACTAACTAAATATTGAT CGTTCGGNC]
[+] EMBL CD096217             [TGAACCACTTGTCGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAAATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGAAGCTGATGCAACTTTACCACTGTTATTATTTGTTGCATCTTCACGATCTTTTCCTTCGCTTCCTGTTGAAGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGANAGCAACTCCATAGATCCGACTTGTAACTTTTGCACTGGCTACTCGNTGTCCACTGTGTCCATCCCATACATATAGAGTATGATCTTCTTGACTGCC ACACTAACTAAATA TGATCCGTTCGGc ]




>consensus_9487#1
TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAA
ATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGT
AGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGC
AACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGA
AGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACA
GGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATAC
ATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAG
AGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACC
AACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATCCGACTTGTAAC
TTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGAGTATGATCTTC
TTGACTGCCAACACTAACTAAATATTGATCGTTCGGNC

consensusID : consensus_9487#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence

                              [TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAAATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGCAACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGAAGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAATCCTAATAATTTCGGCTTACGCAGTTTTGCAGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCANACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATCCAAAATGCTATTGGTGCAACTGAAGATGATGTAGTG]

[+] EMBL CD096284             [TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAAATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGCAACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGAAGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAATCCTAATAATTTCGGCTTACGCAGTTTTGCAGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCANACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATCCAAAATGCTATTGGTGCAACTGAAGATGATGTAGTG]




>consensus_9487#2
TGAACCACTTGTTGAAATACAGTTTGCTCTAGAAGTTTTTAAATCAACCCATTTGTCTAA
ATCCCTTTGACCATTAAATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGT
AGTAGATGTTGTGGTTGTTGTAGAGGCGATACCTGGAGACGATGATGATGATGCTGATGC
AACTTTACCACTGTTATTATTTGTTACATCTTCACGATCTTTTCCTTCGCTTCCTGTTGA
AGATTTCAATTTAGCAGAATGAATTTGAGTAGAACCGGGATTAGAGGAAGACAAAGTACA
GGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATAC
ATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAATCCTAAT
AATTTCGGCTTACGCAGTTTTGCAGAAGTTGCCGGTGAACCACCGATCCATCAGACACAA
GGTTCTTCAGACGGTATCAGTCANACTGTTACAAGTGCTCCTTTAGGTTTAAGTAATATC
CAAAATGCTATTGGTGCAACTGAAGATGATGTAGTG

consensusID : consensus_9487#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 554
fasta sequence

                              [TAGTTCTAAATTTAAATTCATGAAATCCGCAAGCCTTCATATACATTGAATATATGTGTATATATCACTGCAATGTACACCATTCGTTTGTATACACCAAGTTCAATATTTTGTGAAGTTATCTTTTTTAAACTTGAATGTAATTTTGTCTAAGATTTATAAATGCTTTCGTCTATTTCTTCCTTATTAATAGATCTATGGAGTTGCTTTCAGTCCAACGGGACAATTTTTTGTTACAGTTGGTGTACGTTATGTTCGTTTTTGGTATTTAGAAAATAAACGTAATAAAATTCGTGAAACTCTACCACTTCATGGAAGAAATGCTATTTTAGGTGATATGTTCAACAGTGTGTTTACTGATGTATGCTGTGTTAATTCCTCGTCGTCGTTGTCTTCTTCTTCGCCTCCTTTATCATCATCCTGTACTTTGTCTTCCTCTAATCCCGGTTCTACTCAAATTCATTCTGCTAAATTGAAATCTTCAACAGGAAGCGAAGGAAAAGATCGTGAAGATGTAACAAATAATAACAGTGGTAAAGTTGCATCAGCATCAT]

[+] EMBL CD154958             [TAGTTCTAAATTTAAATTCATGAAATCCGCAAGCCTTCATATACATTGAATATATGTGTATATATCACTGCAATGTACACCATTCGTTTGTATACACCAAGTTCAATATTTTGTGAAGTTATCTTTTTTAAACTTGAATGTAATTTTGTCTAAGATTTATAAATGCTTTCGTCTATTTCTTCCTTATTAATAGATCTATGGAGTTGCTTTCAGTCCAACGGGACAATTTTTTGTTACAGTTGGTGTACGTTATGTTCGTTTTTGGTATTTAGAAAATAAACGTAATAA                                                                                                                                                                                                                                                                          ]
[-] EMBL CD180469             [                                                                                                                                                          ATTTATAAATGCTTTCGTCTATTTCTTCCTTATTAATAGATCTATGGAGTTGCTTTCAGTCCAACGGGACAATTTTTTGTTACAGTTGGTGTACGTTATGTTCGTTTTTGGTATTTAGAAAATAAACGTAATAAAATTCGTGAAACTCTACCACTTCATGGAAGAAATGCTATTTTAGGTGATATGTTCAACAGTGTGTTTACTGATGTATGCTGTGTTAATTCCTCGTCGTCGTTGTCTTCTTCTTCGCCTCCTTTATCATCATCCTGTACTTTGTCTTCCTCTAATCCCGGTTCTACTCAAATTCATTCTGCTAAATTGAAATCTTCAACAGGAAGCGAAGGAAAAGATCGTGAAGATGTAACAAATAATAACAGTGGTAAAGTTGCATCAGCATCAT]




>consensus_9487#3
TAGTTCTAAATTTAAATTCATGAAATCCGCAAGCCTTCATATACATTGAATATATGTGTA
TATATCACTGCAATGTACACCATTCGTTTGTATACACCAAGTTCAATATTTTGTGAAGTT
ATCTTTTTTAAACTTGAATGTAATTTTGTCTAAGATTTATAAATGCTTTCGTCTATTTCT
TCCTTATTAATAGATCTATGGAGTTGCTTTCAGTCCAACGGGACAATTTTTTGTTACAGT
TGGTGTACGTTATGTTCGTTTTTGGTATTTAGAAAATAAACGTAATAAAATTCGTGAAAC
TCTACCACTTCATGGAAGAAATGCTATTTTAGGTGATATGTTCAACAGTGTGTTTACTGA
TGTATGCTGTGTTAATTCCTCGTCGTCGTTGTCTTCTTCTTCGCCTCCTTTATCATCATC
CTGTACTTTGTCTTCCTCTAATCCCGGTTCTACTCAAATTCATTCTGCTAAATTGAAATC
TTCAACAGGAAGCGAAGGAAAAGATCGTGAAGATGTAACAAATAATAACAGTGGTAAAGT
TGCATCAGCATCAT

consensusID : consensus_9487#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence

                              [GACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATCCGACTTGTAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGAGTATGATCTTCTTGACTATCAGGATGATGATAAGGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAAC]

[+] EMBL CD129485             [GACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATCCGACTTGTAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGAGTATGATCTTCTTGACTATCAGGATGATGATAAGGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATAACGTACACCAACTGTAAC]




>consensus_9487#4
GACAAAGTACAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGGAATTA
ACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGCATTTCTTCCA
TGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACA
TAACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACTCCATAGATC
CGACTTGTAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATATAGA
GTATGATCTTCTTGACTATCAGGATGATGATAAGGGAGGCGAAGAAGAAGACAACGACGA
CGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAATAGC
ATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCA
AAAACGAACATAACGTACACCAACTGTAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9487#1      --------------------------TGAACCACTTGTTG--AAATACAGTTTGCTCT-- 30
consensus_9487#4      ------------------------------------------------------------
consensus_9487#2      --------------------------TGAACCACTTGTTG--AAATACAGTTTGCTCT-- 30
consensus_9487#0      ACTGTACAAGCTGGTACCATTGTATCTGGAGCATCAATTTCCATGTGCACGCAGTTTTGC 60
consensus_9487#3      ------------------------------------------------------------
                                                                                  

consensus_9487#1      AGAAGTTTTTAA------ATCAACCCATTTGTC-TAAATCCCTTTGACCA-------TTA 76
consensus_9487#4      ------------------------------------------------------------
consensus_9487#2      AGAAGTTTTTAA------ATCAACCCATTTGTC-TAAATCCCTTTGACCA-------TTA 76
consensus_9487#0      AGAAGTTGCCGGTGAACCACCGATCCATCAGACACAAGGTTCTTCAGACGGTATCAGTCA 120
consensus_9487#3      --------------------TAGTTC--TAAATTTAAATTCATGAAATCCGCAAGCCTTC 38
                                                                                  

consensus_9487#1      AATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTT 136
consensus_9487#4      ------------------------------------------------------------
consensus_9487#2      AATTGTATTAAACGACCAGCTGTATTTACGACCAATGTCAAAGTAGTAGATGTTGTGGTT 136
consensus_9487#0      AACTGTTACAAGTGCTCCTTTAGGTTTAAG--TAATATCCAAAATGCTATTGGTGCAACT 178
consensus_9487#3      ATATACATTGAATATATGTGTATATATCACTGCAATGT-ACACCATTCGTTTGTATACAC 97
                                                                                  

consensus_9487#1      GTTGTAGA---GGCGATACCTGGAGACGATGATGATGATGCTGAT-GCAACTTTACCACT 192
consensus_9487#4      ------------------------------------------------------------
consensus_9487#2      GTTGTAGA---GGCGATACCTGGAGACGATGATGATGATGCTGAT-GCAACTTTACCACT 192
consensus_9487#0      GAAGATGATGTAGTGATGTCTGGGGGGGAAGATGACGATGATTATAGTAGTGACATTGAT 238
consensus_9487#3      CAAGTTCA----ATATTTTGTGAAGTTATCTTTTTTAAACTTGAATGTAATTTTGTC--T 151
                                                                                  

consensus_9487#1      GTTATT----ATTTGTTACATCTTCACGATC-TTTTCCTTCGCTTCCTGTTGAAGATTTC 247
consensus_9487#4      ------------------------------------------------------------
consensus_9487#2      GTTATT----ATTTGTTACATCTTCACGATC-TTTTCCTTCGCTTCCTGTTGAAGATTTC 247
consensus_9487#0      GTGAATCAAGATAGCCAACAAGCACATAGTCGTTCTGAAACTGTACAAGCTGGTACCATT 298
consensus_9487#3      AAGATTTATAAATGCTTTCGTCTATTTCTTCCTTATTAATAGATCTATGGAGTTGCTTTC 211
                                                                                  

consensus_9487#1      AATTTAGCAGAATGAATTTGAGTAG--AACCGGGATTA-------GAGGAAGACAAAGTA 298
consensus_9487#4      ---------------------------------------------------GACAAAGTA 9
consensus_9487#2      AATTTAGCAGAATGAATTTGAGTAG--AACCGGGATTA-------GAGGAAGACAAAGTA 298
consensus_9487#0      GTATCTGGAGCATCAATTTCCATGGCTAGTTTGGAATATTCTCTTGAGTGTGACAAGATG 358
consensus_9487#3      AGTCCAACGGGACAATTTTTTGTTAC--AGTTGGTGTACGTTATGTTCGTTTTTGGTATT 269
                                                                                * 

consensus_9487#1      CAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGG-AATTAACACAGCA 357
consensus_9487#4      CAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGG-AATTAACACAGCA 68
consensus_9487#2      CAGGATGATGATAAAGGAGGCGAAGAAGAAGACAACGACGACGAGG-AATTAACACAGCA 357
consensus_9487#0      TCAGTTACAAATGATGCCAATACAGCTCGTACTGAGGCTGGCTCTGTAACTCCTAATGTG 418
consensus_9487#3      TAGAAAATAAACGTAATAAAATTCGTGAAACTCTACCACTTCATGG-AAGAAATGCTATT 328
                                *             *         *      *   * **           

consensus_9487#1      TACATCAGTAAACACACTGTTGAACAT------ATCACCTAAAATAGCATTTCTTCCATG 411
consensus_9487#4      TACATCAGTAAACACACTGTTGAACAT------ATCACCTAAAATAGCATTTCTTCCATG 122
consensus_9487#2      TACATCAGTAAACACACTGTTGAACAT------ATCACCTAAAATAGCATTTCTTCCATG 411
consensus_9487#0      TTCCTGCCTGATTTCA-TGTTGAATATGTGTAAATTCCTTGAAAAACTTTTACCATTCGG 477
consensus_9487#3      TTAGGTGATATGTTCAACAGTGTGTTT------ACTGATGTATGCTGTGTTAATTCCTCG 382
                      *       *     **    **    *      *       *       **        *

consensus_9487#1      AAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATA 471
consensus_9487#4      AAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATACCAAAAACGAACATA 182
consensus_9487#2      AATCCTAATAATTTCGGC-------TTACGCA-GTTTTGCAGAAGTTGCCGGTGAACCAC 463
consensus_9487#0      ATCTCATACTACTGAAGCAATGTGCCCACAATTTGTTAGTCAAGGTGGATTACAAGCTTT 537
consensus_9487#3      TCGTCGTTGTCTTCTTCT-------TCGCCTCCTTTATCATCATCCTGTACTTTGTCTTC 435
                                  *               *      *      *             *   

consensus_9487#1      ACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACT-CCATAGATCC 530
consensus_9487#4      ACGTACACCAACTGTAACAAAAAATTGTCCCGTTGGACTGAAAGCAACT-CCATAGATCC 241
consensus_9487#2      CGATCCATCA-----GACACAAGGTTCTTCAGACGGTATCAGTCANACTGTTACAAGTGC 518
consensus_9487#0      ATGTGATTTGATTCGCATGCCTGGTTTACCGTATGATTTTCCAGTGTCTGCTACATGTGC 597
consensus_9487#3      CTCTAATCCCGGTTCTACTCAAATTCATTCTGCTAAATTGAAATCTTCAACAGGAAGCGA 495
                         *            *       *    *        *        *      *     

consensus_9487#1      GACTTG----TAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATAT 586
consensus_9487#4      GACTTG----TAACTTTTGCACTGGCTACTCGTTGTCCACTGTGTCTATCCCATACATAT 297
consensus_9487#2      TCCTTT----AGGTTTAAGTAATATCCAA--AATG-CTATTG-GTGCAACTGAAGATGAT 570
consensus_9487#0      ATCATTGTGTAAAATTTTCGAAGACTTAGCCAAT--TCAGTTAATTTAACCGATGTAACT 655
consensus_9487#3      AGGA------AAAGATCGTGAAGATGTAACAAATAATAACAGTGGTAAAGTTGCATCAGC 549
                                     *    *      *     *    *        *            

consensus_9487#1      AGAGTATGATCTTCTTGACTGCCAACACTAACTAAATATTGATCGTTCGGNC-------- 638
consensus_9487#4      AGAGTATGATCTTCTTGACTATCAGGATGATGATAAGGGAGGCGAAGAAGAAGACAACGA 357
consensus_9487#2      GTAGTG------------------------------------------------------ 576
consensus_9487#0      AAACCTTTGTTCCAGTGCTTGGAATCTTCATTGGATAAACTATCTGTTCTACACACTTCT 715
consensus_9487#3      ATCAT------------------------------------------------------- 554
                                                                                  

consensus_9487#1      ------------------------------------------------------------
consensus_9487#4      CGACGAGGAATTAACACAGCATACATCAGTAAACACACTGTTGAACATATCACCTAAAAT 417
consensus_9487#2      ------------------------------------------------------------
consensus_9487#0      AACTATCCAATGAGTTCTATACTCTTACGTGAATATTTGTCTGGTGAACGAGAAGTGTTG 775
consensus_9487#3      ------------------------------------------------------------
                                                                                  

consensus_9487#1      ------------------------------------------------------------
consensus_9487#4      AGCATTTCTTCCATGAAGTGGTAGAGTTTCACGAATTTTATTACGTTTATTTTCTAAATA 477
consensus_9487#2      ------------------------------------------------------------
consensus_9487#0      CATGAATTGGTGACAATCGCTTCAGTAGTTTGTATTTTAGTACAAATGATTGAGCATATT 835
consensus_9487#3      ------------------------------------------------------------
                                                                                  

consensus_9487#1      ------------------------------------------------------------
consensus_9487#4      CCAAAAACGAACATAACGTACACCAACTGTAAC--------------------------- 510
consensus_9487#2      ------------------------------------------------------------
consensus_9487#0      AAATCAGAAATTCGTTTGTCATTGGCTAGTAGTTGGTTATCTCAGAACTGTTTGAAAACA 895
consensus_9487#3      ------------------------------------------------------------
                                                                                  

consensus_9487#1      ----------------------------
consensus_9487#4      ----------------------------
consensus_9487#2      ----------------------------
consensus_9487#0      TTGGGGCGTCTATATTTAGGAGTTTCTT 923
consensus_9487#3      ----------------------------