cluster # 9502

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Schistosoma mansoni
cluster # 9502 cluster # 9502 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9502#0 length = 1190 sequences # 6

consensus_9502#1 length = 729 sequences # 1
consensus_9502#2 length = 574 sequences # 3

consensusID : consensus_9502#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1190
fasta sequence

                              [GAGCCATATTCGGCACGACGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGG-AAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAA-CTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAAC-TCGAATAGACTGCACTTCTTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTGTTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTAAGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTAAATTTGTACATATTTTACTAGGGGTTCTTAGAAATATACTCACTTATTGGT]

[+] EMBL CD081578             [GAGCCATATTCGGCACGACGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGG AAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTANGACTCTGGTATATGGTCTTGATGAGAATCTGAATTATTNTTTATGTGTGTATAGAACCTGC TCCTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTTCG ATAGACT                                                                                                                                                                                                                                              ]
[-] EMBL CD153275             [                                            TGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTNTACAAGTNTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGGGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AI111164             [                                                                                                                                                                                                                                                           TGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGANACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGANATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGGAAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTT ACGATCTTTCATCCAAAAGTTAATATGATCNGTGATATACACCATAATGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI111043             [                                                                                                                                                                                                                                                           TGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCANANATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGG AAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD077281             [                                                                                                                                                                                                                                                                                                                                                                                                               AAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGG AAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAA CTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAAC TCGAATAGACT                                                                                                                                                                                                                                              ]
[-] EMBL CD073750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGG AAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAA CTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAAC TCGAATAGACTGCACTTCTTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTGTTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTAAGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTAAATTTGTACATATTTTACTAGGGGTTCTTAGAAATATACTCACTTATTGGT]




>consensus_9502#0
GAGCCATATTCGGCACGACGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAAT
CCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGAT
AATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGA
TTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGT
TTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCT
TCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAA
TCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAA
GTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCC
GTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAA
TTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAAC
TCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATA
AAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCA
TCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATG
ATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACT
CTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAACTGCTTCT
TTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTCGAATAGACTGCACTTCT
TCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTGT
TTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTAA
GTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTAA
ATTTGTACATATTTTACTAGGGGTTCTTAGAAATATACTCACTTATTGGT

consensusID : consensus_9502#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 729
fasta sequence

                              [CAAAATTTGGCACGAGGCGCTGTACAAGTTATCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAACTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTCGAATAGACTGCACTTCTTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTGTTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTAAGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTAAATTTGTACATATTNTACTAGGCTTACTTAGAAATATACTCACTTATTGGT]

[+] EMBL CD079480             [CAAAATTTGGCACGAGGCGCTGTACAAGTTATCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAACTCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAACTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTCGAATAGACTGCACTTCTTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTGTTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTAAGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTAAATTTGTACATATTNTACTAGGCTTACTTAGAAATATACTCACTTATTGGT]




>consensus_9502#1
CAAAATTTGGCACGAGGCGCTGTACAAGTTATCTGAAACAGTCAATATCGTCTTGGTTTT
CCAGAGATATTGAATGGAATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTAT
CTCGTTACAGTTCGATAACTCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTG
GTCTTTCTAATGAATTATAAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTT
TGTTTTTAACGATCTTTCATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATA
AATCAGTGATCAAATAATGATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTC
TGATGTATTCATTAGGACTCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATG
TGTGTATAGAACTGCTTCTTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAAC
TCGAATAGACTGCACTTCTTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAG
TCGACTATTCTGTGACTGTTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCG
AAAGTCTGTACTACATTAAGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTT
CATTGTATACATTGTCTAAATTTGTACATATTNTACTAGGCTTACTTAGAAATATACTCA
CTTATTGGT

consensusID : consensus_9502#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 574
fasta sequence

                              [TTGTTGCATGATTCTCTGATATACTTTTATATGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGNAATTTGTGAAATTCTAGTTGAC]

[+] EMBL AI975277             [TTGTTGCATGATTCTCTGATATACTTTTATATGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGNAATTTGTGAAATTCTAGTTGAC]
[+] EMBL AI975499             [TTGTTGCATGATTCTCTGATATACTTTTATATGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAATCAGT                                                                                                                                                                                                    ]
[+] EMBL BF936347             [TTGTTGCATGATTCTCTGATATACTTTTATATGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCC                                                                                                                                                                                                                                                                           ]




>consensus_9502#2
TTGTTGCATGATTCTCTGATATACTTTTATATGCATACCCCCTCAACACACATTTCATGT
AGCTAGACGCAATCCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTT
TGTTAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTG
GTAAAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGT
ACCTAAATAAAGTTTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTA
ATTATCCCCAGCTTCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAG
CTTTTCCTTGTAATCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGC
GCGTGTTAGCAAAGTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTG
AAAATGCTATTCCGTTGTACAAGTTTCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAG
ATATTGAATGGNAATTTGTGAAATTCTAGTTGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9502#0      GAGCCATATTCGGCACGACGCATACCCCCTCAACACACATTTCATGTAGCTAGACGCAAT 60
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      CCTACTCGTCTGCAAATATTTTAAGATGTTTGATCGTTTTACAAGTTTGTTAAGCTTGAT 120
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      AATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTAAAATCTATGA 180
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      TTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACCTAAATAAAGT 240
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      TTGCATAATCGTGAATGTTGCTACTGAGTGAGGCCTTGCAGGCACTAATTATCCCCAGCT 300
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      TCAGAGACTATATACCCAATATTCTGAAAATGGCTTCCGAATTTTAGCTTTTCCTTGTAA 360
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      TCAGTTTAGAGGACAGGAACCCGGAACTGATCAAGAAATAAAACAGCGCGTGTTAGCAAA 420
consensus_9502#1      ------------------------------------------------------------
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      GTATAATGTAACATTCGATTTGTTCCACAAAATTGATGTTAATGGTGAAAATGCTATTCC 480
consensus_9502#1      ---------------------------------------CAAAATTTGGCACGAGG---C 18
consensus_9502#2      ------------------------------------------------------------
                                                                                  

consensus_9502#0      GTTGTACAAGTT-TCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGA 539
consensus_9502#1      GCTGTACAAGTTATCTGAAACAGTCAATATCGTCTTGGTTTTCCAGAGATATTGAATGGA 78
consensus_9502#2      ------------------------------------------------TTGTTGCATGAT 12
                                                                       * *** ***  

consensus_9502#0      ATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAA 599
consensus_9502#1      ATTTTGTGAAATTTCTAGTTGACAGAAACGGTACTCCTGTATCTCGTTACAGTTCGATAA 138
consensus_9502#2      TCTCTGATATACTTTTATATG-CATACCCCCTCAACACACATTTCAT-GTAGCTAGACG- 69
                        * **  * * ** **  ** ** *  *  *   *    ** ** *   ** * **   

consensus_9502#0      CTCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTAT 659
consensus_9502#1      CTCCCCCCAATAGTATGGAAGCTGAAATTCGAAAGTTACTTGGTCTTTCTAATGAATTAT 198
consensus_9502#2      -CAATCCTACTCGTCTGCAAAT----ATTTTAAGAT-GTTTGATCGTTTTACAAGTTTGT 123
                           ** * * ** ** **      ***  **  *   *** ** ** **     ** *

consensus_9502#0      AAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTC 719
consensus_9502#1      AAAACTTGATTTAATTACCTGTTTGTCTGTTTGCTTTCCTTTTGTTTTTAACGATCTTTC 258
consensus_9502#2      TAAGCTTGATAATCTTCTTGGCCAATTCGGAAGCTTGCATGAGAAGTCCAGCATCTGGTA 183
                       ** ******    **    *    *  *   **** * *      *  * *      * 

consensus_9502#0      ATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAAT 779
consensus_9502#1      ATCCAAAAGTTAATATGATCAGTGATATACACCATAATGATAAATCAGTGATCAAATAAT 318
consensus_9502#2      AAATCTATGATTTTACTGTCACTGATATTGACGGTAATGAAGTTCAACTGAAAAAGTACC 243
                      *     * * *  **   *** ******  **  ******      * ***  ** **  

consensus_9502#0      GATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGAC 839
consensus_9502#1      GATGAATATGTTTGCAAATCTTATTTATGATTAAACATATTCTGATGTATTCATTAGGAC 378
consensus_9502#2      TA-AATAAAGTTTGCA-----TAATCGTGAATGTTGCTACTGAG-TGAGGCCTTGCAGGC 296
                       *  *  * *******     ** *  *** *     ** *  * **    * *   * *

consensus_9502#0      TCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAACTGCTTC 899
consensus_9502#1      TCTGGTATATGGTCTTGATGAGATCCTGAATTATTTTTTATGTGTGTATAGAACTGCTTC 438
consensus_9502#2      ACTAAT-TATCCCCAGCTTCAGAGACTATAT-ACCCAATATTCTGAAAATGGCTTCCGAA 354
                       **  * ***   *    * ***  **  ** *     ***      *  *   * *   

consensus_9502#0      TTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTCGAATAGACTGCACTTC 959
consensus_9502#1      TTTAATCTTTTATTTATATCTATAGATGCTTATAATAGAAACTCGAATAGACTGCACTTC 498
consensus_9502#2      TTTTAGCTTTTCCTTGTA---ATCAGTTTAGAGGACAGGAACCCGGAACTGAT-CAAGAA 410
                      *** * *****  ** **   **   *    *  * ** *** ** *     * **    

consensus_9502#0      TTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTG 1019
consensus_9502#1      TTCAAACTGTTCTTTTCTTTGATATAAAAGTGGGTTGCAAAGTCGACTATTCTGTGACTG 558
consensus_9502#2      ATAAAACAGCGCGTGT------TAGCAAAGTATAATGTAA-------CATTC---GATT- 453
                       * **** *  * * *      **  *****    ** **        ****   ** * 

consensus_9502#0      TTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTA 1079
consensus_9502#1      TTTTCCATGATACCTAATAGATACGAAGATTAGAATTATTCGAAAGTCTGTACTACATTA 618
consensus_9502#2      TGTTCCACAA-----AATTGATGTTAATGGTGAAAATGCT----ATTCCGTTGTAC---A 501
                      * *****  *     *** ***   **   *  ** *  *    * ** **  ***   *

consensus_9502#0      AGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTA 1139
consensus_9502#1      AGTTAGTATAAAAGTATGTGTGTATATTATCCCTTCTTTCTTCATTGTATACATTGTCTA 678
consensus_9502#2      AGTTTCTGAAACAGT---------CAATATCGTCTTGGTTTTCCAGAGATATTGAATGGN 552
                      ****  *  ** ***          * ****   *   * ***     ***     *   

consensus_9502#0      AATTTGTACATATTTTACTAGGGGTTCTTAGAAATATACTCACTTATTGGT 1190
consensus_9502#1      AATTTGTACATATTNTACTAGGCTTACTTAGAAATATACTCACTTATTGGT 729
consensus_9502#2      AATTTGTGAA-ATTCTAGTTGAC---------------------------- 574
                      *******  * *** ** * *