cluster # 9592

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9592 cluster # 9592 Sequences # 10 consensus # 8

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9592#0 length = 624 sequences # 2
consensus_9592#1 length = 581 sequences # 1
consensus_9592#2 length = 570 sequences # 1
consensus_9592#3 length = 568 sequences # 1

consensus_9592#4 length = 488 sequences # 1
consensus_9592#5 length = 432 sequences # 2
consensus_9592#6 length = 410 sequences # 1
consensus_9592#7 length = 123 sequences # 1

consensusID : consensus_9592#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 624
fasta sequence

                              [GTATTATTTTATTTGTAAGATTTGTTTGAATTTTCTTCTTGTTAGTGTTAAGGACTGAATTTTGATCAGTGAACGAAATAGCTCGATTCTACTATTGAGTCATAAGTATTTTAAATGAAGATGAAGAATGATAAGCAATAGAATCTATAACGAATATTTTATACCATTTGGGACCGATTGAAATTCACTTCTTGACATCAACAATAGAAAGATAATAAATAATTTCAATTTCGCCGTCATTCTTGTTTAGAACTGTTTATAGAATATTTGAGTACAAAGAAAGCAAAAGTAAACTAAATCCATTTATACTAATTGGTCAATAGAAAGTAATAAGTGTTGTTCGTTTTAGGTTTGATAGAATTCCAATAGTAAATTTCACATTGGGGTTACTAAGTTAAATGAATTGATAGGGTATTTGGATAATAATCAGTGTTTAATCAGAAGGGGATTTGTGGAGATTTCAGTATTTTTCAAAGTTGAAATCATGAGTCAATTGAAGCTAGACCACGATCGAAAACCTGGAAGCACTGGACGGTCGTTTCGTCCTATTATGGGACTCCTCAGCAGTGCACATCCACAACCCCGCACTCGCGAGATTCGAACCCAGGACCTACCAGTCTCGAG]

[+] EMBL CD129874             [GTATTATTTTATTTGTAAGATTTGTTTGAATTTTCTTCTTGTTAGTGTTAAGGACTGAATTTTGATCAGTGAACGAAATAGCTCGATTCTACTATTGAGTCATAAGTATTTTAAATGAAGATGAAGAATGATAAGCAATAGAATCTATAACGAATATTTTATACCATTTGGGACCGATTGAAATTCACTTCTTGACATCAACAATAGAAAGATAATAAATAATTTCAATTTCGCCGTCATTCTTGTTTAGAACTGTTTATAGAATATTTGAGTACAAAGAAAGCAAAAGTAAACTAAATCCATTTATACTAATTGGTCAATAGAAAGTAATAAGTGTTGTTCGTTTTAGGTTTGATAGAATTCCAATAGTAAATTTCACATTGGGGTTACTAAGTTAAATGAATTGATAGGGTATTTGGATAATAATCAGTGTTTAATCAGAAGGGGATTTGTGGAGATTTCAGTATTTTTCAAAGTTGAAATCATGAGTCAATTGAAGCTAGACCACGATCGAAAACCTGGAAGCACTGGACGGTCGTTTCGTCCTATTATGGGACTCCTCAGCAGTGCACATCCACAACCCCGCACTCGCGAGATTCGAACCCAGGACCTACCAGTCTCGAG]
[+] EMBL CD129872             [GTATTATTTCATTTGTAAGATTTGTTTGAATTTTCTTCTTGTTAGTGTTAAGGACTGAATTTTGATCAGTGAACGAAATAGCTCGATTCTACTATTGAGTCATAAGTATTTTAAATGAAGATGAAGAATGATAAGCAATAGAATCTATAACGAATATTTTATACCATTTGGGACCGATTGAAATTCACTTCTTGACATCAACAATAGAAAGATAATAAATAATTTCAATTTCGCCGTCATTCTTGTTTAGAACTGTTTATAGAATATTTGAGTACAAAGAAAGCAAAAGTAAACTAAATCCATTTATACTAATTGGTTAATAGAAAGTAATAAGTGTTGTTCGTTTTAGGTTTGATAGAATTCCAATAGTAAATTTCACATTGGGGTTACTAAGTTAAATGAATTGATAGGGTATTTGGATAATAATCAGTGTTTAATCAGAAGGGGATTTGTGGAGATTTCAGTATTTTTCAAAGCTGAAATCATGAGTCAATTGAAGCTAGACCACGATCGACAACCTGGAAGCACTGGACGGTCGTTTCGTC                                                                               ]




>consensus_9592#0
GTATTATTTTATTTGTAAGATTTGTTTGAATTTTCTTCTTGTTAGTGTTAAGGACTGAAT
TTTGATCAGTGAACGAAATAGCTCGATTCTACTATTGAGTCATAAGTATTTTAAATGAAG
ATGAAGAATGATAAGCAATAGAATCTATAACGAATATTTTATACCATTTGGGACCGATTG
AAATTCACTTCTTGACATCAACAATAGAAAGATAATAAATAATTTCAATTTCGCCGTCAT
TCTTGTTTAGAACTGTTTATAGAATATTTGAGTACAAAGAAAGCAAAAGTAAACTAAATC
CATTTATACTAATTGGTCAATAGAAAGTAATAAGTGTTGTTCGTTTTAGGTTTGATAGAA
TTCCAATAGTAAATTTCACATTGGGGTTACTAAGTTAAATGAATTGATAGGGTATTTGGA
TAATAATCAGTGTTTAATCAGAAGGGGATTTGTGGAGATTTCAGTATTTTTCAAAGTTGA
AATCATGAGTCAATTGAAGCTAGACCACGATCGAAAACCTGGAAGCACTGGACGGTCGTT
TCGTCCTATTATGGGACTCCTCAGCAGTGCACATCCACAACCCCGCACTCGCGAGATTCG
AACCCAGGACCTACCAGTCTCGAG

consensusID : consensus_9592#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence

                              [GGTGGATACCAACCAAACAAACACGCAAGATTCTACTTCACCGAAAAAGAAAACAGTAATGAAAAAGAAAAAATTCACCAAGTGTCATGATTTGAGCATTGAAGTTAGTAATATGCAGTTCACTACAAAACTACTCAATGAGTTCTGTGAAATCGGGGTATGTTACACGTTTTTCCACGCCCGATTTTGTCGCATATGTATCACTAGGTCTCCCTGAGTAAAAATAGATAATTCCAAGTTACAAAAATCCTTGTAAATTATAGATTTCATCTGTTGGAATTCCATTCAGTTCTTGTATTCGTTTTTTCACAACTCATTAGATGATTTTCAAAGTCTGTTTCATCTTGCACGGCGTATTTGATAAAAAGTGCAAATTAGTGACCAAATCGAGATGTTCACTAATAATATATGACTACCCTTGATATACATGAGGATCGTTATTTTCCAGAGTTCATCCATGAAATGTACCGTTGGATTTTCGTTATTGCATTTAAAAATCTACATACGAGAGTGTATNTCGTTCATTTTCGGAACGTTTTGCAAGTACTCAGTGTGATCTGGGTATTTTTTTAGTCATAACA]

[+] EMBL CD185932             [GGTGGATACCAACCAAACAAACACGCAAGATTCTACTTCACCGAAAAAGAAAACAGTAATGAAAAAGAAAAAATTCACCAAGTGTCATGATTTGAGCATTGAAGTTAGTAATATGCAGTTCACTACAAAACTACTCAATGAGTTCTGTGAAATCGGGGTATGTTACACGTTTTTCCACGCCCGATTTTGTCGCATATGTATCACTAGGTCTCCCTGAGTAAAAATAGATAATTCCAAGTTACAAAAATCCTTGTAAATTATAGATTTCATCTGTTGGAATTCCATTCAGTTCTTGTATTCGTTTTTTCACAACTCATTAGATGATTTTCAAAGTCTGTTTCATCTTGCACGGCGTATTTGATAAAAAGTGCAAATTAGTGACCAAATCGAGATGTTCACTAATAATATATGACTACCCTTGATATACATGAGGATCGTTATTTTCCAGAGTTCATCCATGAAATGTACCGTTGGATTTTCGTTATTGCATTTAAAAATCTACATACGAGAGTGTATNTCGTTCATTTTCGGAACGTTTTGCAAGTACTCAGTGTGATCTGGGTATTTTTTTAGTCATAACA]




>consensus_9592#1
GGTGGATACCAACCAAACAAACACGCAAGATTCTACTTCACCGAAAAAGAAAACAGTAAT
GAAAAAGAAAAAATTCACCAAGTGTCATGATTTGAGCATTGAAGTTAGTAATATGCAGTT
CACTACAAAACTACTCAATGAGTTCTGTGAAATCGGGGTATGTTACACGTTTTTCCACGC
CCGATTTTGTCGCATATGTATCACTAGGTCTCCCTGAGTAAAAATAGATAATTCCAAGTT
ACAAAAATCCTTGTAAATTATAGATTTCATCTGTTGGAATTCCATTCAGTTCTTGTATTC
GTTTTTTCACAACTCATTAGATGATTTTCAAAGTCTGTTTCATCTTGCACGGCGTATTTG
ATAAAAAGTGCAAATTAGTGACCAAATCGAGATGTTCACTAATAATATATGACTACCCTT
GATATACATGAGGATCGTTATTTTCCAGAGTTCATCCATGAAATGTACCGTTGGATTTTC
GTTATTGCATTTAAAAATCTACATACGAGAGTGTATNTCGTTCATTTTCGGAACGTTTTG
CAAGTACTCAGTGTGATCTGGGTATTTTTTTAGTCATAACA

consensusID : consensus_9592#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 570
fasta sequence

                              [GGGTTAGAGTTGGTTTTATTAAGCTGAGAGCGTGATCTCAGTACCCAAGAGACAACTGCTTGAGGCCGTTACACACTACTTTTTTCTGTTAGCTCCGTGCTTCTTGAGACCTTACCGCTGACGACGTATGTCCGTGAAATACAGCGAGGTGTGAATTCTTAGGGTCGACCTTTCCTGACCCTTCGTGGGAAGGTAGCGTCTCTGTTATCTAGTTATCTGTGGGTAACACAATAATGTCGTCACATATCTGTAAGGTCAGCAGTTCGTCTCAGACCTTTCGTTTGTTGCTTTTAGTCTTACCATTCTTCAACCGACCTGTCTGGTATGGTAGAACCTTGAGGAACAATTGTTTCAGTCAGTTTATCCCGATTGTCTCATCATGACGGACAAGCCTGACCACCACGTCAAGGTAGCAGTAACGGTCAGGGTATCAGTAGTGTGGTGTGTGCTACTGATGTCGACAGATATAAGTAGTATGTATCATCAATCGAAAGTAAAATACCTGAAAGCCGAAGGTTAAGAAGATCAAAGAAAAGAGAACAAAGAATGATTGGTATGGAAACGAAAGAA]

[+] EMBL CD095117             [GGGTTAGAGTTGGTTTTATTAAGCTGAGAGCGTGATCTCAGTACCCAAGAGACAACTGCTTGAGGCCGTTACACACTACTTTTTTCTGTTAGCTCCGTGCTTCTTGAGACCTTACCGCTGACGACGTATGTCCGTGAAATACAGCGAGGTGTGAATTCTTAGGGTCGACCTTTCCTGACCCTTCGTGGGAAGGTAGCGTCTCTGTTATCTAGTTATCTGTGGGTAACACAATAATGTCGTCACATATCTGTAAGGTCAGCAGTTCGTCTCAGACCTTTCGTTTGTTGCTTTTAGTCTTACCATTCTTCAACCGACCTGTCTGGTATGGTAGAACCTTGAGGAACAATTGTTTCAGTCAGTTTATCCCGATTGTCTCATCATGACGGACAAGCCTGACCACCACGTCAAGGTAGCAGTAACGGTCAGGGTATCAGTAGTGTGGTGTGTGCTACTGATGTCGACAGATATAAGTAGTATGTATCATCAATCGAAAGTAAAATACCTGAAAGCCGAAGGTTAAGAAGATCAAAGAAAAGAGAACAAAGAATGATTGGTATGGAAACGAAAGAA]




>consensus_9592#2
GGGTTAGAGTTGGTTTTATTAAGCTGAGAGCGTGATCTCAGTACCCAAGAGACAACTGCT
TGAGGCCGTTACACACTACTTTTTTCTGTTAGCTCCGTGCTTCTTGAGACCTTACCGCTG
ACGACGTATGTCCGTGAAATACAGCGAGGTGTGAATTCTTAGGGTCGACCTTTCCTGACC
CTTCGTGGGAAGGTAGCGTCTCTGTTATCTAGTTATCTGTGGGTAACACAATAATGTCGT
CACATATCTGTAAGGTCAGCAGTTCGTCTCAGACCTTTCGTTTGTTGCTTTTAGTCTTAC
CATTCTTCAACCGACCTGTCTGGTATGGTAGAACCTTGAGGAACAATTGTTTCAGTCAGT
TTATCCCGATTGTCTCATCATGACGGACAAGCCTGACCACCACGTCAAGGTAGCAGTAAC
GGTCAGGGTATCAGTAGTGTGGTGTGTGCTACTGATGTCGACAGATATAAGTAGTATGTA
TCATCAATCGAAAGTAAAATACCTGAAAGCCGAAGGTTAAGAAGATCAAAGAAAAGAGAA
CAAAGAATGATTGGTATGGAAACGAAAGAA

consensusID : consensus_9592#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 568
fasta sequence

                              [GAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTGATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTATTTGGAGAAGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGTTTTTCTATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACTGAAATGATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGNTCAGGTTTACTGGTGGGTGACCATCTCCATTGGGTGTGGCCAGTGAGGGAATGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGAGCTGATGA]

[+] EMBL CD153781             [GAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTGATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTATTTGGAGAAGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGTTTTTCTATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACTGAAATGATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGNTCAGGTTTACTGGTGGGTGACCATCTCCATTGGGTGTGGCCAGTGAGGGAATGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGAGCTGATGA]




>consensus_9592#3
GAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAGTTGTGCTGATTCGCCGAGTTCTG
ATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTGTGTTTGACAAATTGTAATTGTAT
TTGGAGAAGAGATATTTACACTGTGTTTTAATGTGTTTTTGCTTTGTCAGGTGCGTGACC
GAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGA
GGAGTTGAGTAATCAACCGGGTGAGTGTGTGATTATATGCGTTGATGTGCATGTATGTGT
TTTTCTATGTTTGAGTATATGATGTGTTACCTACATTGTGTAATCAGTTTGAAATGAACT
GAAATGATGCTGAATAATGATAATGTTAATATTGGAGTTTGTTTTATTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGNTCAGGTTTACTGGTGGGTGACCATCTCC
ATTGGGTGTGGCCAGTGAGGGAATGATTGTTTACAATGTGATGCGTTGTGATAGATGTGT
GATAGTCGTCCAGTGAATGAGCTGATGA

consensusID : consensus_9592#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence

                              [TTTTTTTTTTTTTTTTGGCGAGTTTTATAATTTCTTTTTCTGGTTAATTAACTATGTTGGTTGTACTTCTTATATATCTGTATACATTTTTCTATGGTATTATTATTAATACAAACAAAGAACTTGTACTGTTCCAATATGGCACTTTGACATATCAATCCGTCCTCTTGTTATCTTTCTCTCATGTCTGAGCAACTTATGACCAACAAACGTCGTATTGAAGGGGGTTTTGGTGAACGAAAACGCAGGCCCCACGCACTCGAACCTCTGCCCTCCTGAATGCTGGACCGTGTGCCTAGCCATTAGACCACATCAAACCACGGGGGAATGACTGCATTTTTCCTTTTATCGAACATTCTGAGGTGCAAACCAATCGNTACTTGGATGAATTGACGAAATATGCTTCAATATATCATGCATACCTAAATCAAACCAGAAAAGGATATTTGACACAACTGTACTTGATCCGCATACCCAACACAATTTTT]

[+] EMBL AI395256             [TTTTTTTTTTTTTTTTGGCGAGTTTTATAATTTCTTTTTCTGGTTAATTAACTATGTTGGTTGTACTTCTTATATATCTGTATACATTTTTCTATGGTATTATTATTAATACAAACAAAGAACTTGTACTGTTCCAATATGGCACTTTGACATATCAATCCGTCCTCTTGTTATCTTTCTCTCATGTCTGAGCAACTTATGACCAACAAACGTCGTATTGAAGGGGGTTTTGGTGAACGAAAACGCAGGCCCCACGCACTCGAACCTCTGCCCTCCTGAATGCTGGACCGTGTGCCTAGCCATTAGACCACATCAAACCACGGGGGAATGACTGCATTTTTCCTTTTATCGAACATTCTGAGGTGCAAACCAATCGNTACTTGGATGAATTGACGAAATATGCTTCAATATATCATGCATACCTAAATCAAACCAGAAAAGGATATTTGACACAACTGTACTTGATCCGCATACCCAACACAATTTTT]




>consensus_9592#4
TTTTTTTTTTTTTTTTGGCGAGTTTTATAATTTCTTTTTCTGGTTAATTAACTATGTTGG
TTGTACTTCTTATATATCTGTATACATTTTTCTATGGTATTATTATTAATACAAACAAAG
AACTTGTACTGTTCCAATATGGCACTTTGACATATCAATCCGTCCTCTTGTTATCTTTCT
CTCATGTCTGAGCAACTTATGACCAACAAACGTCGTATTGAAGGGGGTTTTGGTGAACGA
AAACGCAGGCCCCACGCACTCGAACCTCTGCCCTCCTGAATGCTGGACCGTGTGCCTAGC
CATTAGACCACATCAAACCACGGGGGAATGACTGCATTTTTCCTTTTATCGAACATTCTG
AGGTGCAAACCAATCGNTACTTGGATGAATTGACGAAATATGCTTCAATATATCATGCAT
ACCTAAATCAAACCAGAAAAGGATATTTGACACAACTGTACTTGATCCGCATACCCAACA
CAATTTTT

consensusID : consensus_9592#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 432
fasta sequence

                              [AATTACAACCGAAGTTCTAATTCCCATTGTGTGATATTTGAAATAATTCTAGTGAAGTGAGATCAGTTTGAGTGAAACAAACAGCAAATAATATTTATTCACCTCCATATTTCCTCTTGTAATTGGTTGATATTCCTTTCAGTGAGCAGTTGAAACGCATTTTTGTATTCTATATAACAAATAAAGTGCATACCTAATTATAATCAGACATATAGGGAGTAATGTTTTGAAGCATACAGATAGTTTATCAGTATGGATGAATGTTTAATCGAGCAGTGTTATTATTCACAACTGACTGATCACTGGGTGGTGATCAATGTCTTGCGTGTCAAGTCCTTCTTAGTGCGGCCCGAATAGCTCAGTGGTAACGTCTCTGACTGTGAAGCTGAGTGGCACGGGATCCAACCCGTAAGGGAGCACCGGTTCCCTCAA]

[+] EMBL CD159668             [AATTACAACCGAAGTTCTAATTCCCATTGTGTGATATTTGAAATAATTCTAGTGAAGTGAGATCAGTTTGAGTGAAACAAACAGCAAATAATATTTATTCACCTCCATATTTCCTCTTGTAATTGGTTGATATTCCTTTCAGTGAGCAGTTGAAACGCATTTTTGTATTCTATATAACAAATAAAGTGCATACCTAATTATAATCAGACATATAGGGAGTAATGTTTTGAAGCATACAGATAGTTTATCAGTATGGATGAATGTTTAATCGAGCAGTGTTATTATTCACAACTGACTGATCACTGGGTGGTGATCAATGTCTTGCGTGTCAAGTCCTTCTTAGTGCGGCCCGAATAGCTCAGTGGTAACGTCTCTGACTGTGAAGCTGAGTGGCACGGGATCCAACCCGTAAGGGAGCACCGGTTCCCTCAA]
[+] EMBL CD159560             [AATTACAACCGAAGTTCTAATTCCCATTGTGTGATATTTGAAATAATTCTAGTGAAGTGAGATCAGTTTGAGTGAAACAAACAGCAAATAATATTTATTCACCTCCATATTTCCTCTTGTAATTGGTTGATATTCCTTTCAGTGAGCAGTTGAAACGCATTTTTGTATTCTATATAACAAATAAAGTGCATACCTAATTATAATCAGACATATAGGGAGTAATGTTTTGAAGCATACAGATAATTTATCAGTATGGATGAATGTTTAATCGAGCAGTGTTATTATTCACAACTGACTGATCACTGGGTGGTGATCAATGT                                                                                                                ]




>consensus_9592#5
AATTACAACCGAAGTTCTAATTCCCATTGTGTGATATTTGAAATAATTCTAGTGAAGTGA
GATCAGTTTGAGTGAAACAAACAGCAAATAATATTTATTCACCTCCATATTTCCTCTTGT
AATTGGTTGATATTCCTTTCAGTGAGCAGTTGAAACGCATTTTTGTATTCTATATAACAA
ATAAAGTGCATACCTAATTATAATCAGACATATAGGGAGTAATGTTTTGAAGCATACAGA
TAGTTTATCAGTATGGATGAATGTTTAATCGAGCAGTGTTATTATTCACAACTGACTGAT
CACTGGGTGGTGATCAATGTCTTGCGTGTCAAGTCCTTCTTAGTGCGGCCCGAATAGCTC
AGTGGTAACGTCTCTGACTGTGAAGCTGAGTGGCACGGGATCCAACCCGTAAGGGAGCAC
CGGTTCCCTCAA

consensusID : consensus_9592#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 410
fasta sequence

                              [TGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGAGCTGATGATGTGGAGTTGAACGTGAATGGAGACTGTGGGGACTTCTGATTGATGATTGGGCACTGTTTTCGCAGGAACTGAACTTGTTGTGTAATGGAGCGATCAGCACGGTGACGACTGAGAGATCAGACACGAAGCTGTGAATAAACACACTGGAGGAAGGAATGACTGAGGGAAGTATTGTACAGTGCATGATGTTGTAGGAAGATGATATGAGATATTTGCTTAGTGGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTTTACTGGTGGGTGACCATGTCCATTGGGT]

[+] EMBL CD147598             [TGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGAGCTGATGATGTGGAGTTGAACGTGAATGGAGACTGTGGGGACTTCTGATTGATGATTGGGCACTGTTTTCGCAGGAACTGAACTTGTTGTGTAATGGAGCGATCAGCACGGTGACGACTGAGAGATCAGACACGAAGCTGTGAATAAACACACTGGAGGAAGGAATGACTGAGGGAAGTATTGTACAGTGCATGATGTTGTAGGAAGATGATATGAGATATTTGCTTAGTGGGTGCGTGACCGAGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAGGAGTTGAGTAATCAACCGGGTTTACTGGTGGGTGACCATGTCCATTGGGT]




>consensus_9592#6
TGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGAGCT
GATGATGTGGAGTTGAACGTGAATGGAGACTGTGGGGACTTCTGATTGATGATTGGGCAC
TGTTTTCGCAGGAACTGAACTTGTTGTGTAATGGAGCGATCAGCACGGTGACGACTGAGA
GATCAGACACGAAGCTGTGAATAAACACACTGGAGGAAGGAATGACTGAGGGAAGTATTG
TACAGTGCATGATGTTGTAGGAAGATGATATGAGATATTTGCTTAGTGGGTGCGTGACCG
AGCAAGCAAGCGTGTGGGTGAATGAATGTGTTGGTGAGTGCCGGATGGCGATGGGATGAG
GAGTTGAGTAATCAACCGGGTTTACTGGTGGGTGACCATGTCCATTGGGT

consensusID : consensus_9592#7
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 123
fasta sequence

                              [GCAACTTGATCGATATCATTCGATCAGCACTAAGACGGACTTGACATGCATGACATTGATCACTACCCAGTGATCAGTCAATTGTGAATCCGTCCTAGTGAAAATTAATCAGTTGAATGTACT]

[+] EMBL CD085833             [GCAACTTGATCGATATCATTCGATCAGCACTAAGACGGACTTGACATGCATGACATTGATCACTACCCAGTGATCAGTCAATTGTGAATCCGTCCTAGTGAAAATTAATCAGTTGAATGTACT]




>consensus_9592#7
GCAACTTGATCGATATCATTCGATCAGCACTAAGACGGACTTGACATGCATGACATTGAT
CACTACCCAGTGATCAGTCAATTGTGAATCCGTCCTAGTGAAAATTAATCAGTTGAATGT
ACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9592#3      -----------------------GAATGAGAAGGCGACGGGCGAACTGAGAAATATGCAG 37
consensus_9592#6      ------------------------------------------------------------
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      -----------------------------------------------AATTACAACCGAA 13
consensus_9592#1      -----------------------------------------------------GGTGGAT 7
consensus_9592#0      GTATTATTTTATTTGTAAGATTTGTTTGAATTTTCTTCTTGTTAGTGTTAAGGACTGAAT 60
consensus_9592#4      ----------------------------------------------------------TT 2
consensus_9592#2      --------------------------GGGTTAGAGTTGGTTTTATTAAGCTGAGAGCGTG 34
                                                                                  

consensus_9592#3      TTGTGCTGATTCGCCGAGTTCTGATTTTGTGCAAACTAGTGTTGGGACTGTGATTGATTG 97
consensus_9592#6      ---TGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGT-GAATG 56
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      GTTCTAATTCCCATTGTGTGATATTTGAAATAATTCTAGTGAAGTGAGATCAGTTTGAGT 73
consensus_9592#1      ACCAACCAAACAAACACGCAAGATTCTACTTCACCGAAAAAGAAAACAGTAATGAAAAAG 67
consensus_9592#0      TTTGATCAGTGAACGAAATAGCTCGATTCTACTATTGAGTCATAAGTATTTTAAATGAAG 120
consensus_9592#4      TTTTTTTTTTTTTTGGCGAGTTTTATAATTTCTTTTTCTGGTTAATTAACTATGTTGGTT 62
consensus_9592#2      ATCTCAGTACCCAAGAGACAACTGCTTGAGGCCGTTACACACTACTTTTTTCTGTTAGCT 94
                                                                                  

consensus_9592#3      TGTTTGACAAATTGTAATTGTATTTGGAGAAGAGATATTTACACT--GTGT-TTTAATGT 154
consensus_9592#6      AGCT-GATGATGTGGAGTTGAACGTGAATGGAGACTGTGGGGACT--TCTG-ATTGATGA 112
consensus_9592#7      -----------------------------------------------GCAA-CTTGATCG 12
consensus_9592#5      GAAACAAACAGCAAATAATATTTATTCACCTCCATATTTCCTCTT--GTAA-TTGGTTGA 130
consensus_9592#1      AAAAAATTCACCAAGTGTCATGATTTGAGCATTGAAGTTAGTAATATGCAG-TTCACTAC 126
consensus_9592#0      ATGAAGAATGATAAGCAATAGAATCTATAACGAATATTTTATACCATTTGGGACCGATTG 180
consensus_9592#4      GTACTTCTTATATATCTGTATACATTTTTCTATGGTATTATTATTA-ATACAAACAAAGA 121
consensus_9592#2      CCGT-GCTTCTTGAGACCTTACCGCTGACGACGTATGTCCGTGAAATACAG-CGAGGTGT 152
                                                                                  

consensus_9592#3      GTTTTTGCTTTGTCAG--GTGCGTGACCGAGCAAGCAAGCG--TGTGGGTGAATGAATGT 210
consensus_9592#6      --TTGGGCACTGTTTT--CGCAGGAACTGAACTTGT---TG--TGTAATGGAGCGATCAG 163
consensus_9592#7      A-TATCATTCGATCAG--CACTAAGACGGACTTGACATGCA--TGACATTGATCA--CTA 65
consensus_9592#5      TATTCCTTTCAGTGAG--CAGTTGAAACGCATTTTT--GTA--TTCTATATAACA---AA 181
consensus_9592#1      AAAACTACTCAATGAGTTCTGTGAAATCGGGGTATGTTACA--CGTTTTTCCACGCCCGA 184
consensus_9592#0      AAATTCACTTCTTGACATCAACAATAGAAAGATAATAAATAATTTCAATTTCGCCGTCAT 240
consensus_9592#4      ACTTGTACTGTTCCAATATGGCACTTTGACATATCAATCCGTCCTCTTGTTATCTTTCTC 181
consensus_9592#2      GAATTCTTAGGGTCGACCTTTCCTGACCCTTCGTGGGAAGGTAGCGTCTCTGTTATCTAG 212
                                                                                  

consensus_9592#3      GTTGGT--GAGTGCC-GGATGGCGATGGGATGAGGAGTTGAGTAATCA-ACC--GGGTGA 264
consensus_9592#6      CACGGT--GACGACT-GAGAGATCA-GACACGAAGCTGTGAATAAACACACT--GGAGGA 217
consensus_9592#7      CCCAGT--GATCAGT-CAATTGTGA--ATCCGTCCTAGTGAA-AATTA-ATC--AGTTGA 116
consensus_9592#5      TAAAGT--GCATACC-TAATTATAATCAGACATA-TAGGGAGTAATGTTTTG--AAGCAT 235
consensus_9592#1      TTTTGTC-GCATATG-TATCACTAGGTCTCCCTGAGTAAAAATAGATAATTCCAAGTTAC 242
consensus_9592#0      TCTTGTT-TAGAACT-GTTTATAGAATATTTGAG-TACAAAGAAAGCAAAAGTAAACTAA 297
consensus_9592#4      TCATGTCTGAGCAAC-TTATGACCAACAAACGTCGTATTGAAGGGGGTTTTGGTGAACGA 240
consensus_9592#2      TTATCTGTGGGTAACACAATAATGTCGTCACATATCTGTAAGGTCAGCAGTTCGTCTCAG 272
                           *                                  *                   

consensus_9592#3      GTGTGT-GATTATATGCGTTGATGTGCATGTATGTGTTTTTCTATGTTTGAGTATATGAT 323
consensus_9592#6      AGGAAT-GACTGAGGGAAGTATTGTACA-GTGCATGATGTT----GTAGGAAGATGATAT 271
consensus_9592#7      ATGTAC-T---------------------------------------------------- 123
consensus_9592#5      ACAGAT-AGTTTATCAGTATGGATGAATGTTTAATCGAGCAGTGTTATTATTCACAACTG 294
consensus_9592#1      AAAAAT-CCTTGTAAATTATAGATTTCATCTGTTGGAATTCCATTCAGTTCTTGTATTCG 301
consensus_9592#0      ATCCAT-TTATACTAATTGGTCAATAGAAAGTAATAAGTGTTGTTCGTTTTAGGTTTGAT 356
consensus_9592#4      AAACGCAGGCCCCACGCACTCGAACCTCTGCCCTCCTGAATGCTGGACCGTGTGCCTAGC 300
consensus_9592#2      ACCTTTCGTTTGTTGCTTTTAGTCTTACCATTCTTCAACCGACCTGTCTGGTATGGTAGA 332
                                                                                  

consensus_9592#3      GTGTTACCTACATTGTGTAATCAGTTTGAAATG--AACTGAAATGATGCTGAATAATGAT 381
consensus_9592#6      GAGATATTTGCTTAGTGGGTGCGTGACCGAGCA--AGCAAGCGTGTGGGTGAATG----- 324
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      ACTGATCACTGGGTGGTGATCAATGTCTTGCGT--GTCAAGTCCTTCTTAGTGCGGCCCG 352
consensus_9592#1      TTTTTTCACAACTCATTAGATGATTTTCAAAGTCTGTTTCATCTTGCACGGCGTATTTGA 361
consensus_9592#0      AGAATTCCAATAGTAAATTTCACATTGGGGTTACTAAGTTAAATGAATTGATAGGGTATT 416
consensus_9592#4      CATTAGACCACATCAAACCACGGGGGAATGACTGCATTTTTCCTTTTATCGAACA-TTCT 359
consensus_9592#2      ACCTTGAGGAACAATTGTTTCAGTCAGTTTATCCCGATTGTCTCATCATGACGGACAAGC 392
                                                                                  

consensus_9592#3      AATGTTAATATTGGAGTTTG-TTTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT 440
consensus_9592#6      AATGT----GTTGGTGAGTG-CCGGATGGCGATGGGATGAGGAGTTG------------- 366
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      AATAGCTCAGTGGTAACGTC-TCTGACTGTGAAGCTGAGTGGCACGGGATCCAACCCGTA 411
consensus_9592#1      TAAAAAGTGCAAATTAGTGA-CCAAATCGAGATGTTCACTAATAATATATGACTACCCTT 420
consensus_9592#0      TGGATAATAATCAGTGTTTAATCAGAAGGGGATTTGTGGAGATTTCAGTATTTTTCAAAG 476
consensus_9592#4      GAGGTGCAAACCAATCGNTACTTGGATGAATTGACGAAATATGCTTCAATATATCATGCA 419
consensus_9592#2      CTGACCACCACGTCAAGGTAGCAGTAACGGTCAGGGTATCAGTAGTGTGGTGTGTGCTAC 452
                                                                                  

consensus_9592#3      TGTTGTTGTTGNTCAGGTTTACTGGTGGGTGACCATCTCCATTGGGTGTGGCCAGTGAGG 500
consensus_9592#6      ---AGTAATCAACCGGGTTTACTGGTGGGTGACCATGTCCATTGGGT------------- 410
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      AGGGAGCACCGGTTCCCTCAA--------------------------------------- 432
consensus_9592#1      GATATACATGAGGATCGTTATTTTCCAGAGTTCATCCATGAAATGTACCGTTGGATTTTC 480
consensus_9592#0      TTGAAATCATGAGTCAATTGAAGCTAGACCACGATCGAAAACCTGGAAGCACTGGACGGT 536
consensus_9592#4      TACCTAAATCAAACCAGAAAAGGATATTTGACACAACTGTACTTGATCCGCATACCCAAC 479
consensus_9592#2      TGATGTCGACAGATATAAGTAGTATGTATCATCAATCGAAAGTAAAATACCTGAAAGCCG 512
                                                                                  

consensus_9592#3      GAATGATTGTTTACAATGTGATGCGTTGTGATAGATGTGTGATAGTCGTCCAGTGAATGA 560
consensus_9592#6      ------------------------------------------------------------
consensus_9592#7      ------------------------------------------------------------
consensus_9592#5      ------------------------------------------------------------
consensus_9592#1      GTTATTGCATTTAAAAATCTACATACGAGAGTGTATNTCGTTCATTTTCGGAACGTTTTG 540
consensus_9592#0      CGTTTCGTCCTATTATGGGACTCCTCAGCAGTGCACATCCACAACCCCGCACTCGCGAGA 596
consensus_9592#4      ACAATTTTT--------------------------------------------------- 488
consensus_9592#2      AAGGTTAAGAAGATCAAAGAAAAGAGAACAAAGAATGATTGGTATGGAAACGAAAGAA-- 570
                                                                                  

consensus_9592#3      GCTGATGA--------------------------------- 568
consensus_9592#6      -----------------------------------------
consensus_9592#7      -----------------------------------------
consensus_9592#5      -----------------------------------------
consensus_9592#1      CAAGTACTCAGTGTGATCTGGGTATTTTTTTAGTCATAACA 581
consensus_9592#0      TTCGAACCCAGGACCTACCAGTCTCGAG------------- 624
consensus_9592#4      -----------------------------------------
consensus_9592#2      -----------------------------------------