Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9604 cluster # 9604       Sequences # 10       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9604#0 length = 824 sequences # 10  
consensusID : consensus_9604#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 824
fasta sequence 
                              [GTATGTTGCATTGACGAATTCGATAAAATGACGGAATTCGATCGCACAGCCATACATGAAGTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAAGGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCCTACGAAGATTCCAATCGTTCAGGACGTCCTCAGTCGTACAAAGATGTAATTTACCATATTGTTCGTGAGTTAACTGCTGCCGGTGATGGGACAGCACGAATTGCTGATATCGCTGAACGTTGTGCAACTAAAGGATATACACCAGCTCAGCTTAATGAAGTCGT]

[+] EMBL CD095130             [GTATGTTGCATTGACGAATTCGATAAAATGACGGAATTCGATCGCACAGCCATACATGAAGTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCGCATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTC                                                                                                                                                                                                                                                             ]
[+] EMBL CD095073             [GTATGTTGCATTGACGAATTCGATAAAATGACGGAATTCGATCGCACAGCCATACATGAAGTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGGTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCTAACAAAGAAATGACTTATACCAGTGCAAGAACTCTTCTGACTATAATGAGACTGTCTACAGCCCGTG                                                                                                                                                                                                                                                                ]
[+] EMBL CD095066             [GTATGTTGCATTGACGAATTCGATAAAATGACGGAATTCGATCGCACAGCCATACATGAAGTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACGCTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATAC                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD095353             [                                            CACAGCCATACATGAAGTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGC                                                                                                                                                                                                                                                               ]
[+] EMBL CD147537             [                                                                                           AAGCTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTT                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD152333             [                                                                                              CTGGTATACTCACAACACTGAATGCACGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGTGTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATNATGAGACTGTCTA                                                                                                                                                                                                                                                                         ]
[+] EMBL CD145892             [                                                                                                                                                                                                                                     TACTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTACATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGCTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAAGGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCCTACGAAGATTCCAATCGTTCAGGACGTCCTCAGTCGTACAAAGATGTAATTTACCATATTATTCGTGAGTTAACTGCTGCCGGTGATGGGACAGCACGAATTGCTGATATCGCTGAACGTT                                           ]
[-] EMBL CD152232             [                                                                                                                                                                                                                                       CTGTGGTTGATTCAAGATAAACCTGACCGGGAACATGATCTCAGATTAGCACAACATATTACTTTTGTGCACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACGAATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCTCAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAAATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAAGGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCCTACGAAGATTCCAATCG                                                                                                                                                   ]
[+] EMBL CD136704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cccttcatAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAAGGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCCTACGAAGATTCCAATCGTTCAGGACGTCCTCAGTCGTACAAAGATGTAATTTACCATATTGTTCGTGAGTTAACTGCTGCCGGTGATGGGACAGCACGAATTGCTGATATCGCTGAACGTTGTGCAACTAAAGGATATACACCAGCTCAGCTTAATGAAGT   ]
[-] EMBL CD161441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTATACAAGTGCAAGAACTCTTCTGGCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAAGGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCCTACGAAGATTCCAATCGTTCAGGACGTCCTCAGTCGTACAAAGATGTAATTTACCATATTGTTCGTGAGTTAACTGCTGCCGGTGATGGGACAGCACGAATTGCTGATATCGCTGAACGTTGTGCAACTAAAGGATATACACCAGCTCAGCTTAATGAAGTCGT]




>consensus_9604#0
GTATGTTGCATTGACGAATTCGATAAAATGACGGAATTCGATCGCACAGCCATACATGAA
GTAATGGAACAGCAAACCATCAGCATAGCTAAAGCTGGTATACTCACAACACTGAATGCA
CGAGTTGCAATCCTTGCTGCAGCTAATCCAGCTTATGGACGTTATAATCCTGATAAAAGT
GTAGAACAAAATGTAGATCTGCCTGCAGCCTTGCTTTCTCGTTTTGATTTACTGTGGTTG
ATTCAAGATAAACCTGACCGGGAACATGATCTTAGATTAGCACAACATATTACTTTTGTG
CACATGCATGGATCTGCTCCATCAGCGACTGACTCACAGATTGATTCAACTTCAAGTACG
AATCATCAACAACTGCTATCGCTCCCTGAACTCCGTCGTCTTATCGCTGTTGCCAAAGCT
CAACCCGCCCCAGCCGTTCCTGCTCATTTGGCCGATTATCTGGTTGGTGCTTATGTAGAA
ATGAGGAAAGAAGCACGTGCAAACAAAGAAATGACTTATACAAGTGCAAGAACTCTTCTG
GCTATAATGAGACTGTCTACAGCCCGTGCTCGACTTCGCGCAGCTTCGGAGGTTAGTAAA
GGCGATATAGATGAAGCTATGCGTCTTATGGAAGCTAGCCGTGCATCAATTATTACATCC
TACGAAGATTCCAATCGTTCAGGACGTCCTCAGTCGTACAAAGATGTAATTTACCATATT
GTTCGTGAGTTAACTGCTGCCGGTGATGGGACAGCACGAATTGCTGATATCGCTGAACGT
TGTGCAACTAAAGGATATACACCAGCTCAGCTTAATGAAGTCGT

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)