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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9669#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 751 fasta sequence
[CGCTAATAAAAATGGACCCTTATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA-CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAAT-AAATGATTATAGGGTCTGGGAGGTGAAATTATTAATGGAGCTCCTCACGGTGTACTTACACTTTCTGGTTATTACGATATAAATATGCATAATGCCGCTGGCTTCGACACTCGGCTAGT]
[+] EMBL CD187032 [CGCTAATAAAAATGGACCCTTATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCT ]
[+] EMBL AW017220 [ ATGGAGCAGTATCGGCAGATCTATTCGATATACCAGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACGTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAGTGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCT ]
[+] EMBL BF936694 [ AGCTGCGGAACAAGAAATAACTGTTGGGTCTAATGATCAA CCAATTGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACGTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAGTGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAAT AAATGATTATAGGGTCTGGGAGGTGAAATTATTAATGGAGCTCCTCACGGTGTACTTACACTTTCTGGTTATTACGATATAAATATGCATAATGCCGCTGGCTTCGACACTCGGCTAGT]
[+] EMBL CD068973 [ AGAAATAACTGTTGGGTCTAATGATCAAGCCAATAGTATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCC ]
[-] EMBL CD194144 [ TATCAGGAAATTCAAATTTATCAGGAGTCGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTGTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAACCCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCA ]
[-] EMBL CD194140 [ TATCAGGAAATTCAAATTTATCAGGAGTTGGACATTCTGCTGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTGTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCC ]
[-] EMBL CD179101 [ TGTATCTAGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCAC ]
[+] EMBL CD185919 [ AGTGCGGGGACTATCACTGTAGGAGCAGATGGAACCTTACACTTTCAAAAGGCACCATCTGGTCAACAAGGCCCACGCGTCATAATGTTGCAGAGGAATGCTCCAGGGTCTGGACCGACTGTGCCAAACTCTCCTGTTCAACGTCCAGGATTAAAGACTGTAAAGATAATTACTGTTCCGGGTCAAGGTGCTGGAGGTAAACCTCTAAAGGCAGCAGTGATACCAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAA ]
[+] EMBL CD162816 [ CAATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAATCAAATG ]
[-] EMBL CD180982 [ AATGCATATGCTGCAAAGAACTGTCAAAATACTTCCTGCTGGGGGTCAGCAAGTGATAAATTCTAGCGGCGCTACTGTAACATCAAATTTCCCACGTGTTCTTACCATCCGTCCTCAGTTATCATCTGGTCCCACAGTCTTGACTGGTGCTACCGCTATTACACCTGTGAGACCTGGCACGCTGATTTTTTCTGGTGCTTCATCAACACAGTTCACAGGATCTCCAGTCAGCTATCAAAGTTCTGAGGATGTTGAAAATCAAATGA ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||