cluster # 9703

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Schistosoma mansoni
cluster # 9703 cluster # 9703 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9703#0 length = 1704 sequences # 8
consensus_9703#1 length = 583 sequences # 1

consensus_9703#2 length = 481 sequences # 1
consensus_9703#3 length = 428 sequences # 1

consensusID : consensus_9703#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1704
fasta sequence

                              [AATTCGGCACGAGGGCAACTNACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTAAGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAACGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTTTCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAGCTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACATGCAAATTAATGGCCGGAGATTCGGACTAACCGAAGATCCTTTGGAGCGGGAAATCGAATCGTATTTAGTGAATTTAATTGGTGCTTCAAAAACAGCTCACTTACTTGGTAAAGAGTTGATGTCCACGCCATATCCTTTCCAAACTTCAGATAATCAAATTTCCCCGTCAAAATCTGCACAAGATGTCTCTTCATCTTCTCCGCTGCGAACTGTGCCATATTCAGTTGGACGAGAAAATGAATCAAGTTCGCCCACTGTACCTCTGTCTACCAATACTTACCAGACAAGCAGTTCTGAAGCATCTTCACAGATTGGCAGTGAAT--CAGTTAGCCGA-GGAAAAAATAATCGACATACTCTTCCAAATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAATTACTTCATGAAAAAGAAACAGATCTAGCTGATTTAGAGCGAATTAAAGAAGAACTATGTGAAAAAAACGAAATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTAAACCAGTTGAAGGATTTCCTCAAATATCTTATCGATGGACAAAAACTGAACTAGCTTTTGTGCTAACAGCTATGAAGAAATATGGTCAAGACTTCCCCACAATTGCCAGAACCGTTGGAACTAAATCAGAAAGTTTCATACGTGATTTCTACAATACATTTCACGACCGTTTCACATTGGACAGCATAATGAAACCATGCGCAAAAGCAAATGACAAGCTCACTGAACCTCCAGCCATAGACCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACTTAACGGATGAAACACCAG-CTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAAT-A-CAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTT-CCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTATGCAAATCCTTTTTT-TTCATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTTGGAGGGTTGAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTATTTACAAATGTAGTCGACGTTTTCATTTTGTGAAATATACGGGTCTCATTATTAATTAAATGAGTATTTTGATGTAGCAATATCTAAATATATGTTA]

[+] EMBL CD081564             [AATTCGGCACGAGGGCAACTNACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTAAGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAACGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTTTCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAGCTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACATGCAAATTAATGGCCGGAGATTCGGACTAACCGAAGATCCTTTGGAGCGGGAAATCGAATCGTATTTAGTGAATTTAATTGGTGCTTCAAAAACAGCTCACTTACTTGGTAAAGAGTTGATGTCCACGCCATATCCTTTCCAAACTTCAGATAATCAAATTTCCCCGTCAAAATCTGCACAAGATGTCTCTTCATCTTCTCCGCTGCGAACTGTGCCATATTCAGTTGGACGAGAAAATGAATCAAGTTCGCCCACTGTACCTCTGTCTACCAATACTTACCAGACAAGCAGTTCTGAAGCATCTTCACAGATTGGCAGTGAAT  CAGTTAGCCGA GGAAAAAATAATCGACATACTCTTCCAAATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAATTACTTCATGAGAAAGAAACAGATCTAGCTGATTTAGAGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD195504             [                                                                                                                                                                                                                                                                                                                                                                                                                   TGGTAAAGAGTTGATGTCCACGCCATATCCTTTCCAAACTTCAGATAATCAAATTTCCCCGTCAAAATCTGCACAAGATGTCTCTTCATCTTCTCCGCTGCGAACTGTGCCATATTCAGTTGGACGAGAAAATGAATCAAGTTCGCCCACTGTACCTCTGTCTACCAATACTTACCAGACAAGCAGTTCTGAAGCATCTTCACAGATTGGCAGTGAAT  CAGTTAGCCGA GGAAAAAATAATCGACATACTCTTCCAAATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAATTACTTCATGAAAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD082153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccGCAGTGAATNNCAGTTAGCCGAGGGAAAAAATATTTGACATACTCTTCCAAATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAATTACTTCATGAAAAAGAAACAGATCTAGCTGATTTAGAGCGAATTAAAGAAGAACTATGTGAAAAAAACGAAATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTAAACCAGTTGAAGGATTTCCTCAAATATCTTATCGATGGACAAAAACTGAACTAGCTTTTGTGCTAACAGCTATGAAGAAATATGGTCAAGACTTCCCCACAATTGCCAGAACCGTTGGAACTAAATCAGAAAGTTTCATACGTGATTTCTACAATACATTTCACGACCGTTTCACATTGGACAGCATAATGAAACCATGCGCAAAAGCAAATGACAAGCTCACTGAACCTCCAGCCATAGACCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACTTAACGGATGAAACACCAG CTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAAATAAT A CAGCG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD116323             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATGCGTGATTTGTACAATACATTTCACGACCGTTTCACATTGCACAGCATAATGAAACCATGCGCAAAAGCAAATGACAAGCTCACTGAACCTCCAGCCATAGACCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACTTAACGGATGAAACAACAG CTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAAATAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAAT ATCAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATGTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTT CCCCACCAC                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD112949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACTTAACGGATGAAACACCAG CTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAA CAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTT CCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGGcac                                                                                                                                                                                                                                                                      ]
[-] EMBL CD075391             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGTTTTCACACAAGATTTGACCAAAAACTTAACGGATGAAACACCAG CTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAA CAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTT CCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTATGCAAATCCTTTTTT TTCATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTTGGAGGGTTGAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTATTTACAAATGTAGTCGACGTTTTCATTTTGTGAAATATACGGGTCTCATTATTAATTAAATGAGTATTTTGATGTAGCAATATCTAAATATATGTTA]
[-] EMBL CD075769             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CACAAGATTTGACCAAAAACTTAACGGATGAAACACCAGNCTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAA CAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATTTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTT CCCCACCCCAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTATGCAAATCCTTTTTT TTCATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTTGGAGGGTTGAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTATTTACAAATGTAGTCGACGTTTTCATTTTGTGAAATATACGGGTCTCA                                                 ]
[-] EMBL SMAA43835            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTAAGTTCCCCCCCCACAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTATGCAAATCCTTTTTTATACATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTTGGAGGGTTGAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTATTTACAAATGTAGTCGACGTTTTCATTTTGTGAAATATACGGGTCTCATTATTAATTAAATGAGTATTTTGATGTAGCAATATCTAAATATATGTTA]




>consensus_9703#0
AATTCGGCACGAGGGCAACTNACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTA
AGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAA
CGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTT
TCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAG
CTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACATGC
AAATTAATGGCCGGAGATTCGGACTAACCGAAGATCCTTTGGAGCGGGAAATCGAATCGT
ATTTAGTGAATTTAATTGGTGCTTCAAAAACAGCTCACTTACTTGGTAAAGAGTTGATGT
CCACGCCATATCCTTTCCAAACTTCAGATAATCAAATTTCCCCGTCAAAATCTGCACAAG
ATGTCTCTTCATCTTCTCCGCTGCGAACTGTGCCATATTCAGTTGGACGAGAAAATGAAT
CAAGTTCGCCCACTGTACCTCTGTCTACCAATACTTACCAGACAAGCAGTTCTGAAGCAT
CTTCACAGATTGGCAGTGAATCAGTTAGCCGAGGAAAAAATAATCGACATACTCTTCCAA
ATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAAT
TACTTCATGAAAAAGAAACAGATCTAGCTGATTTAGAGCGAATTAAAGAAGAACTATGTG
AAAAAAACGAAATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTA
AACCAGTTGAAGGATTTCCTCAAATATCTTATCGATGGACAAAAACTGAACTAGCTTTTG
TGCTAACAGCTATGAAGAAATATGGTCAAGACTTCCCCACAATTGCCAGAACCGTTGGAA
CTAAATCAGAAAGTTTCATACGTGATTTCTACAATACATTTCACGACCGTTTCACATTGG
ACAGCATAATGAAACCATGCGCAAAAGCAAATGACAAGCTCACTGAACCTCCAGCCATAG
ACCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACT
TAACGGATGAAACACCAGCTATTTCTGTCGATGGAAAAAATGAACAAGATTCTGTACAAA
TACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACC
GCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATACAGCGTACGGCTGTC
ATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCA
CCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGG
ACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTATGCAA
ATCCTTTTTTTTCATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTTGGAG
GGTTGAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTATTTACAAATGTAG
TCGACGTTTTCATTTTGTGAAATATACGGGTCTCATTATTAATTAAATGAGTATTTTGAT
GTAGCAATATCTAAATATATGTTA

consensusID : consensus_9703#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence

                              [CAAAACTTACGGNTGAAACACCAGCTATTTCTGTCGATGGGAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAACAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATNTCTTTATGCAAATCCTTTTTTNTCATGACTTGCCGATTCGNNTTAACACTTGTAACCGCGTTTACTTGGAGGGTTTGAAAGCAGCGAACTGCTTCTGTGGTGCCAACTCCGATATCTTTATTTTACAAATGTAGTCGACGTTTTCATTTTTGTGAAATATACGGGTCTCATTTATTTAATTTAAATGAGTATTTTTGATGTTAGCAATTTNNGNNATTATATTGTGA]

[-] EMBL SMAA43809            [CAAAACTTACGGNTGAAACACCAGCTATTTCTGTCGATGGGAAAAATGAACAAGATTCTGTACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAACAGCGTACGGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACAATCACCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAAGTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATNTCTTTATGCAAATCCTTTTTTNTCATGACTTGCCGATTCGNNTTAACACTTGTAACCGCGTTTACTTGGAGGGTTTGAAAGCAGCGAACTGCTTCTGTGGTGCCAACTCCGATATCTTTATTTTACAAATGTAGTCGACGTTTTCATTTTTGTGAAATATACGGGTCTCATTTATTTAATTTAAATGAGTATTTTTGATGTTAGCAATTTNNGNNATTATATTGTGA]




>consensus_9703#1
CAAAACTTACGGNTGAAACACCAGCTATTTCTGTCGATGGGAAAAATGAACAAGATTCTG
TACAAATACCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAAC
TAGACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAACAGCGTAC
GGCTGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCAC
ACAATCACCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAA
GTAGAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATNTCTT
TATGCAAATCCTTTTTTNTCATGACTTGCCGATTCGNNTTAACACTTGTAACCGCGTTTA
CTTGGAGGGTTTGAAAGCAGCGAACTGCTTCTGTGGTGCCAACTCCGATATCTTTATTTT
ACAAATGTAGTCGACGTTTTCATTTTTGTGAAATATACGGGTCTCATTTATTTAATTTAA
ATGAGTATTTTTGATGTTAGCAATTTNNGNNATTATATTGTGA

consensusID : consensus_9703#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence

                              [TTGAAAAATTCTCATATGATGACTCACATAATTTATCTCCAAAGGAATTTAGTATTTGGATGCCAAACAAGCAACCTGACCTGCAAGAGCTAAATTCCTACCTTGAGTTTGCTAAGCAGCATCAATACACTCAAGAATTAGCCTTAATATTACTACACTGGCATAACTATAGCATTCCGAAAGCAGTTGATGATATACCCAACTACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTAAGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAACGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTTTCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAGCTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACAT]

[-] EMBL CD147651             [TTGAAAAATTCTCATATGATGACTCACATAATTTATCTCCAAAGGAATTTAGTATTTGGATGCCAAACAAGCAACCTGACCTGCAAGAGCTAAATTCCTACCTTGAGTTTGCTAAGCAGCATCAATACACTCAAGAATTAGCCTTAATATTACTACACTGGCATAACTATAGCATTCCGAAAGCAGTTGATGATATACCCAACTACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTAAGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAACGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTTTCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAGCTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACAT]




>consensus_9703#2
TTGAAAAATTCTCATATGATGACTCACATAATTTATCTCCAAAGGAATTTAGTATTTGGA
TGCCAAACAAGCAACCTGACCTGCAAGAGCTAAATTCCTACCTTGAGTTTGCTAAGCAGC
ATCAATACACTCAAGAATTAGCCTTAATATTACTACACTGGCATAACTATAGCATTCCGA
AAGCAGTTGATGATATACCCAACTACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGG
TTAAGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAA
AAACGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTC
CTTTCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTC
GAGCTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACA
T

consensusID : consensus_9703#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 428
fasta sequence

                              [ATTACTCAATCACTCTTCAAATTACCATAGCTAAATTATGTAATTGTAAAGATATTAAAAATGTACTTCTGCTTACTTGTGAGTTATAAATCAATAGTTTTATACCCACCTATCTCAATCATGTTAGTAGTTGATATTCGCGTCAGGACTACTAGCAGTTATGTCTCTTGTCAAACCATTAAACAATTATCATCGTAACATTCAATAAACCCCTTAATATATTAAATTCACACATACTTTTTATGTTATTCATCAGTTCTGTAGAGTATTTTTTTCATTACTACTTGTCTTTATTGACGATATTTTTTTTAACTGACTTATTATCTATATTTTCATTTACTAAATTAGTATTATTTTCATTGTTTTATTGGACCATTAGATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTA]

[+] EMBL CD096686             [ATTACTCAATCACTCTTCAAATTACCATAGCTAAATTATGTAATTGTAAAGATATTAAAAATGTACTTCTGCTTACTTGTGAGTTATAAATCAATAGTTTTATACCCACCTATCTCAATCATGTTAGTAGTTGATATTCGCGTCAGGACTACTAGCAGTTATGTCTCTTGTCAAACCATTAAACAATTATCATCGTAACATTCAATAAACCCCTTAATATATTAAATTCACACATACTTTTTATGTTATTCATCAGTTCTGTAGAGTATTTTTTTCATTACTACTTGTCTTTATTGACGATATTTTTTTTAACTGACTTATTATCTATATTTTCATTTACTAAATTAGTATTATTTTCATTGTTTTATTGGACCATTAGATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTA]




>consensus_9703#3
ATTACTCAATCACTCTTCAAATTACCATAGCTAAATTATGTAATTGTAAAGATATTAAAA
ATGTACTTCTGCTTACTTGTGAGTTATAAATCAATAGTTTTATACCCACCTATCTCAATC
ATGTTAGTAGTTGATATTCGCGTCAGGACTACTAGCAGTTATGTCTCTTGTCAAACCATT
AAACAATTATCATCGTAACATTCAATAAACCCCTTAATATATTAAATTCACACATACTTT
TTATGTTATTCATCAGTTCTGTAGAGTATTTTTTTCATTACTACTTGTCTTTATTGACGA
TATTTTTTTTAACTGACTTATTATCTATATTTTCATTTACTAAATTAGTATTATTTTCAT
TGTTTTATTGGACCATTAGATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGA
ATTGCTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9703#0      AATTCGGCACGAGGGCAACTNACGTGCCTGTTTATAATAAATGGACGAAAGGGGAGGTTA 60
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      AGAAATTTCTGAGATGTATTGACTCAAAACCCAGAAAAAATTTTGTCGAAGCTAAAAAAA 120
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CGGTACCTGGACGACATATGGGCGATATATGTGCTTTGTATTATTCTATTGCTGCTCCTT 180
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      TCAAAGCAAGAACAAGGAATAAATATCACAGTGAATTAATTGAACAATGCTTTTCTCGAG 240
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CTGTTCGAAACGGTTTAGTTACATGTCGTTGGGCGAAATCTTCATCTCCTGGAAACATGC 300
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      AAATTAATGGCCGGAGATTCGGACTAACCGAAGATCCTTTGGAGCGGGAAATCGAATCGT 360
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      ATTTAGTGAATTTAATTGGTGCTTCAAAAACAGCTCACTTACTTGGTAAAGAGTTGATGT 420
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CCACGCCATATCCTTTCCAAACTTCAGATAATCAAATTTCCCCGTCAAAATCTGCACAAG 480
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      ATGTCTCTTCATCTTCTCCGCTGCGAACTGTGCCATATTCAGTTGGACGAGAAAATGAAT 540
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CAAGTTCGCCCACTGTACCTCTGTCTACCAATACTTACCAGACAAGCAGTTCTGAAGCAT 600
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CTTCACAGATTGGCAGTGAATCAGTTAGCCGAGGAAAAAATAATCGACATACTCTTCCAA 660
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      ATGGAGCGTATTATGATCATGATGAATTTATGGCATTTTTAACTATGTCCAACGATCAAT 720
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      TACTTCATGAAAAAGAAACAGATCTAGCTGATTTAGAGCGAATTAAAGAAGAACTATGTG 780
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      AAAAAAACGAAATTACTGAAGCACGTTCAAGATCTGTTCTTTATAAAATGGAATTGCTTA 840
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      AACCAGTTGAAGGATTTCCTCAAATATCTTATCGATGGACAAAAACTGAACTAGCTTTTG 900
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      TGCTAACAGCTATGAAGAAATATGGTCAAGACTTCCCCACAATTGCCAGAACCGTTGGAA 960
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      CTAAATCAGAAAGTTTCATACGTGATTTCTACAATACATTTCACGACCGTTTCACATTGG 1020
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      ACAGCATAATGAAACCATGCGCAAAAGCAAATGACAAGCTCACTGAACCTCCAGCCATAG 1080
consensus_9703#1      ------------------------------------------------------------
consensus_9703#2      ------------------------------------------------------------
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      ACCGGAAGCCCATATACCAAAAGCCGTTGGTTGTTTTCACACAAGATTTGACCAAAAACT 1140
consensus_9703#1      -----------------------------------------------------CAAAACT 7
consensus_9703#2      ---------------------------------------------------TTGAAAAAT 9
consensus_9703#3      ------------------------------------------------------------
                                                                                  

consensus_9703#0      TAACGGATGA-AACACCAGCTATTTCTGTCGATGGAAAAAATGAACA-AGATTCTGTACA 1198
consensus_9703#1      TA-CGGNTGA-AACACCAGCTATTTCTGTCGATGGGAAAAATGAACA-AGATTCTGTACA 64
consensus_9703#2      TCTCATATGATGACTCACATAATTTATCTCCAAAGGAATTTAGTATTTGGATGCCAAACA 69
consensus_9703#3      -------------------------------------------------ATTACTCAATC 11
                                                                         * *   *  

consensus_9703#0      AATA-CCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAG 1257
consensus_9703#1      AATA-CCTGAAGTACGAGACATTACACACCTCAATATGAAAACTGAGTCTGATGAACTAG 123
consensus_9703#2      AGCAACCTGACCTGCAAGA-GCTAAATTCCT--------ACCTTGAGTTTGCTAAGCAGC 120
consensus_9703#3      ACTC-TTCAAATTACCATA-GCTAAATTATGTA------ATTGTAAAGATATTAAA-AAT 62
                      *        *  * * * *   ** *             *   * *   *  * *     

consensus_9703#0      ACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATA-CAGCGTACGGC 1316
consensus_9703#1      ACCGCTCAACATCCCAAGCACTTGGTAAACATGGGGAAAAAATAAATAACAGCGTACGGC 183
consensus_9703#2      A----TCAATACACTCAAGAATTAGCCTTAAT-----ATTACTACAC--TGGCATAACTA 169
consensus_9703#3      GTACTTCTGCTTACTTGTGAGTTATAAATCA------ATAGTTTTATACCCACCTATCTC 116
                           **      *     * **       *      *    *  *      * **    

consensus_9703#0      TGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACA 1376
consensus_9703#1      TGTCATCTCGACGGCGTACAGCATCATCTAAATTTGTTGCCCCTGAGACCCTATCACACA 243
consensus_9703#2      TAGCATTCCGAAAGCAGTTGATGATATACCCAACTAC-GTGCCTG----TTTATAATA-A 223
consensus_9703#3      AATCATGTTAGTAGTTGATATTCGCGTCAGGACTACTAGCAGTTATG--TCTCTTGTCAA 174
                         ***       *            *    *      *    *       * *     *

consensus_9703#0      ATCACCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAAGTA 1436
consensus_9703#1      ATCACCTGAACGAATCACAACTAAGTTCCCCACCACAATCCGTCAGCAGAGGCAGAAGTA 303
consensus_9703#2      ATGGACGAAAGGGGAGGTTAAGAAATTTCTGA----GATGTATTGACTCAAAACCCAGAA 279
consensus_9703#3      ACCA-TTAAACAATTATCATCGTAACATTCAAT--AAACCCCTTAATATATTAAATTCAC 231
                      *       **             *       *     *    *      *          

consensus_9703#0      GAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATTTCTTTAT 1496
consensus_9703#1      GAGGACGAGCTAAACGTTTAAGACGCAGCTAATCTTTATCGAACCTGGATATNTCTTTAT 363
consensus_9703#2      AAAATTTTGTCGAA-GCTAAAAAAACGGT--ACCTGGACGACATATGGGCGATA---TAT 333
consensus_9703#3      ACATACTTTTTATG---TTATTCATCAGT---TCTGTAGAGTATTTTTTTCAT------T 279
                                       * *     * *     **  *    *  *             *

consensus_9703#0      GCAAATCCTTTTTTTTCATGACTTGCCGATTCGTTTTAACACTTGTAACCGCGTTTACTT 1556
consensus_9703#1      GCAAATCCTTTTTTNTCATGACTTGCCGATTCGNNTTAACACTTGTAACCGCGTTTACTT 423
consensus_9703#2      GTGCTTTGTATTATTCTATTGCTGCTCCTTTCAAAGCAAGAACAAGGAATAAATAT-CAC 392
consensus_9703#3      ACTACTTGTCTTTATTGACGA-TATTTTTTTTAACTGACTTATTATCTATATTTTCATTT 338
                           *  * **     *    *      **      *               *      

consensus_9703#0      GGAGGGTT-GAAAGCAGCGAACTGTTTCTGTGGTGCCAACTCCGATATCTTA--TTTACA 1613
consensus_9703#1      GGAGGGTTTGAAAGCAGCGAACTGCTTCTGTGGTGCCAACTCCGATATCTTTATTTTACA 483
consensus_9703#2      AGTGAATT----AATTGAACAATGCTTTTCTCGAGCTGTTCGAAACGGTTTAGTTACATG 448
consensus_9703#3      ACTAAATT---------AGTATTATTTTCATTGTTTTATT--GGACCATTAGATTACTGA 387
                            **            * *  **   * *           *    *    *     

consensus_9703#0      AATGTAGTCGACGTTTTCATTTT-GTGAAATATACGGGTCTCATTA--TTAATT-AAATG 1669
consensus_9703#1      AATGTAGTCGACGTTTTCATTTTTGTGAAATATACGGGTCTCATTTATTTAATTTAAATG 543
consensus_9703#2      TCGTTGGGCGAAATCTTCATCTCCTGGAAACAT--------------------------- 481
consensus_9703#3      AGCACGTTCAAGATCTGT-TCTTTATAAAATGGAATTGCTTA------------------ 428
                              * *  * *   * *     ***                              

consensus_9703#0      AGTATTTT-GATGT-AGCAATATCTAAATATATGTTA--- 1704
consensus_9703#1      AGTATTTTTGATGTTAGCAATTTNNGNNATTATATTGTGA 583
consensus_9703#2      ----------------------------------------
consensus_9703#3      ----------------------------------------