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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9724#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 730 fasta sequence
[GCGGTTGCGGGAATTCGATTCACACAGAACCCCGTCGCAACACTTTTGAAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA-AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA-CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCGGGTGTTTATCGAAT]
[+] EMBL CD086331 [GCGGTTGCGGGAATTCGATTCACACAGAACCCCGTCGCAACACTTTTGAAAAAGGCGGGTAAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCCCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTTTGCGCAACATAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGACCCGAC ACCCCGATGATGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAAGCATATTGATGTAAAAGACTGGATCTACGAGGTTGTGAACCTGAGCATACCGATGCAAAAGAACTGTGCTTACGAAGCCATGGA ]
[-] EMBL CD086367 [ TTG AAAAGGCGGAT AAAACCAAGGCTGTACACCCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGCGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ]
[-] EMBL CD086315 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCGCCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCGGGTGTTTATCGAAT]
[+] EMBL CD086320 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAGAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATCGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTNTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCANAAGACCTGTGCTTACGAAGCCATGGACGGAC ]
[+] EMBL CD086319 [ AAAAAGGCGGATAAAAGCCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAGTCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGTCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCACTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCNCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTNTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGta ]
[+] EMBL CD086401 [ AAAAAGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTGATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGGAACGGTTAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCNCCGAAAGCCATATTGGTGTAAAAGACTGGATCTACCAGTGTGTGAACCTGAGCCTACCGATGCCAAAGACCTGTGCCTTCGAAGCCATTGA ]
[+] EMBL CD086327 [ AAAAAGGCGGGTAAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCCCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTTTGCGCAACAGAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCA ]
[-] EMBL CD086310 [ AAAGGGCGGATAAAAACCAAGGCTGTACCACCGCTCCACCAGCGGGGGCCTTTGGGCCAACAACCCAAGCAGCAGGGTCAA AAGGAGTAAAAGGGTAATTTTGCGCAACAGAAATCGTTGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAGCCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCAAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTATGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ]
[-] EMBL CD086403 [ AAAGCGGGGTAAAACCAAGGCTATACCACCGCTCCACCAGCGCGGGGCTTTGGGCCAACAGCNCAAGCAGCAGGG CAACCACGAGTAAAAGGGTAACTNTGCGCAACAGAAATGGGCGGAGAAACATGCTCAACAGGGGAATGCGTTAAAATATTAGCCCAAACTAACCCATTTTGGCATAATTTCTCTACCTTTGCCCACCTTAAAAATCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCCCGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAGGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ]
[-] EMBL CD086369 [ GCATAATTTCTCTACCTTTGCCCACCTTAAAATTCGAAGTCGATGAGCAGCCGCCGGGAATATGAGATTGCATTTGTGGGTCTGAAGCCGGGGTTGCACGAGTTCGTTTATAAGATAGATGACCGGTTCTTTGAGGAATATAACGAGCAGGATTTTAAAAATCCACGCGCCGAAGTAAAGCTCATTCTGGAGAAAAACAACTCCTTTATGCTGCTGCGCTTTGAAGTGGGCGGACAGGCTGAAGTGATCTGCGACCGATGCAGCAGCAACCTGCCCCTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGAAGAAGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGAC ]
[-] EMBL CD086366 [ CGATGCAGCAGCAGCCTGCCCGTGCAGTTGTTCGATGAATTTACCGTAACGGTAAAAATGA CCGACAACCCCGATGAGGCCAACGACAGCGAAGAAGACCCGGACATTTTTTACATCAGCCGCACCGAAAGCCATATTGATGTAAAAGACTGGATCTACGAGTTTGTGAACCTGAGCATACCGATGCAAAAGACCTGTGCTTACGAAGCCATGGACGGACCGCATTGCGACCCc ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||