cluster # 9742

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Schistosoma mansoni
cluster # 9742 cluster # 9742 Sequences # 11 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9742#0 length = 762 sequences # 3
consensus_9742#1 length = 682 sequences # 3

consensus_9742#2 length = 614 sequences # 1
consensus_9742#3 length = 482 sequences # 3
consensus_9742#4 length = 123 sequences # 1

consensusID : consensus_9742#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 762
fasta sequence

                              [TCCAGGCCAGAATTCTGCACGAGGTCACGATTTAAATTTGTGCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTAC----AGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGCGCTAATTCTATCAAATATTNGCCAAGCTCACGGGATAATCCACTAGTTTATGTACATATTTTCCTTTTTAATACATACAGNCGCTGTATTTTCAGTAATATTATGGTA]

[+] EMBL CD079877             [TCCAGGCCAGAATTCTGCACGAGGTCACGATTTAAATTTGTGCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATATGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAACGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGCGCTAATTCTATCAAATATTNGCCAAGCTCACGGGATAATCCACTAGTTTATGTACATATTTTCCTTTTTAATACATACAGNCGCTGTATTTTCAGTAATATTATGGT ]
[+] EMBL CD078567             [                                         GCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTAC    AGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTT                                                                                                                                          ]
[-] EMBL CD073034             [                                                                                                                                                                                                                                                                         AACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTAC    AGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCAAATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTTTAAATACATACAGTTCCTGTATTTTCAGTAATATTATGTTA]




>consensus_9742#0
TCCAGGCCAGAATTCTGCACGAGGTCACGATTTAAATTTGTGCTATTAGAAATATCACTT
GACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAAC
TGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGC
AGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAG
TGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTC
TTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTC
ATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTA
GGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCT
GTACAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTT
TATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCC
AGAAGTCTTTGTTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGCGCTAAT
TCTATCAAATATTNGCCAAGCTCACGGGATAATCCACTAGTTTATGTACATATTTTCCTT
TTTAATACATACAGNCGCTGTATTTTCAGTAATATTATGGTA

consensusID : consensus_9742#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 682
fasta sequence

                              [GCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTAGCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCCGACTACAGGTGAATATGTTGTTCGGTAGTTCTG-ACGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGGTAAGATTTATTCTATCAGTATGTATTAGTATAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAA]

[+] EMBL CD080036             [GCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGGTAAGATTTATTCTATCAGTATGTATTAGTATAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAA]
[+] EMBL SMAA98636            [                                        TAGCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCCGACTACAGGTGAATATGTTGTTCGGTAGTTCTG ACGGCTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AA952758             [                                        TAGCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCCGACTACAGGTGAATATGTTGTTCGGTAGTTCTG ACGGCTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_9742#1
GCTATTAGAAATATCACTTGACTTGGGATTTCGAGATCAGTAGCCCCTCTCTTCGTACTT
CTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCCGACTACAGGTGAATA
TGTTGTTCGGTAGTTCTGACGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGG
AAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCA
GAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATAT
ATAACGAAAGTCATCGTCATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAAC
ATTTTATCAATGCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCAT
TTTAATAATCTTTCTCCTGTACAGGTAAGATTTATTCTATCAGTATGTATTAGTATAGAG
AGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATC
AGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAA
GTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATC
AGAACACATACTTGTACTAAAA

consensusID : consensus_9742#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence

                              [GTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGNTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCANATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTNTAATACATACAGTTC]

[+] EMBL CD079291             [GTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGNTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCANATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTNTAATACATACAGTTC]




>consensus_9742#2
GTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAAG
GCAGCTGACTACAGGTGAATATGTTGTTCGGTAGTTCTGCAGGGCTGTACAAAGTAATTT
CGTCGTTGTCGAATAGCACTGGAAGATACATGTCTTCAAGTGCCGGTCCAGTAGAATCTC
GATTAAACCGGGTTTTATCTCAGAAGTTTAATGTAAATTCTTCAACTTTCACTCACTCTT
CAGCCGACCTTTTTGAGAATATATAACGAAAGTCATCGTCATAACCAGAAAATAGGTATA
GAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAG
AGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTA
TCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAG
AAGTCTTTGNTATAAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGTGCTAATTC
TATCANATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTNT
AATACATACAGTTC

consensusID : consensus_9742#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 482
fasta sequence

                              [CGAGCCTGNATTCGGCACGAGGCGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAATTCATTATTCAGAGCTGCAGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGGAGCTATCGGCTAAGTGTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCAAATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTTTAAATACATACAGTTCC]

[+] EMBL CD081551             [CGAGCCTGNATTCGGCACGAGGCGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAATTCATTATTCAGAGCTGCAGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGGAGCTATCGGCTAAGTGTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCAAATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTTTAAATACATACAGTTC ]
[-] EMBL CD075376             [                       GCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAATTCATTATTCAGAGCTGCAGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGGAGCTATCGGCTAAGTGTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCAAATATTGTCCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTTTAAATACATACAGTTCC]
[+] EMBL CD121707             [                                                                                                                                                                                                                                                                          CATACTTGTACTAAAATTCATTATTCGGAGCTGCAGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGGAGCTATCGGCTAAGTGTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATC                                                                        ]




>consensus_9742#3
CGAGCCTGNATTCGGCACGAGGCGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAAT
AATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAACATGAACTACAG
TCTGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACCTTTGGATATACAT
ACGTCTCCACCCTGCCAGAAGTCTTTGTTATAAGGTGTTTGCCAAGGTAAGTGGGTCCTC
GTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAATTCATTATTCAGAGCTGC
AGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGGAGCTATCGGCTAAGT
GTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCAAATATTGTC
CAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTCTTTTTAAATACATACAGTT
CC

consensusID : consensus_9742#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 123
fasta sequence

                              [GTTGGCCATCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAGGCAGCTGACTACAGGCGTAATATGTTGTTCGGCAGTTTCTGCAGGGCTGTATCAAAGTCCTTTC]

[+] EMBL AA952851             [GTTGGCCATCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAGGCAGCTGACTACAGGCGTAATATGTTGTTCGGCAGTTTCTGCAGGGCTGTATCAAAGTCCTTTC]




>consensus_9742#4
GTTGGCCATCTCTTCGTACTTCTGCATTGTTCTCGATAACTGTTTCATTACTCCAAAAGG
CAGCTGACTACAGGCGTAATATGTTGTTCGGCAGTTTCTGCAGGGCTGTATCAAAGTCCT
TTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9742#0      TCCAGGCCAGAATTCTGCACGAGGTCACGATTTAAATTTGTGCTATTAGAAATATCACTT 60
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      -----------------------------------------GCTATTAGAAATATCACTT 19
consensus_9742#2      ------------------------------------------------------------
consensus_9742#3      ------------------------------------------------------------
                                                                                  

consensus_9742#0      GACTTGGGATTTCGAGATCAGTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGA---T 117
consensus_9742#4      --------------------GTTGGCCATCTCTTCGTACTTCTGCATTGTTCTCGA---T 37
consensus_9742#1      GACTTGGGATTTCGAGATCAGTAGCCCCTCTCTTCGTACTTCTGCATTGTTCTCGA---T 76
consensus_9742#2      --------------------GTTTCCCCTCTCTTCGTACTTCTGCATTGTTCTCGA---T 37
consensus_9742#3      ------------CGAGCCTGNATTCGGCACGAGGCGCATTTTAGGGTTGTAATCGTGTCT 48
                                                   *    ** * **  *  ****  ***    *

consensus_9742#0      AACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTG-AATATGTTGTTCGGTAGTT 176
consensus_9742#4      AACTGTTTCATTACTCCAAAA-GGCAGCTGACTACAGGCGTAATATGTTGTTCGGCAGTT 96
consensus_9742#1      AACTGTTTCATTACTCCAAAAAGGCAGCCGACTACAGGTG-AATATGTTGTTCGGTAGTT 135
consensus_9742#2      AACTGTTTCATTACTCCAAAAAGGCAGCTGACTACAGGTG-AATATGTTGTTCGGTAGTT 96
consensus_9742#3      CATCATTTTAATAATCTTTCTCCTGTACAGAGAGAACGCTTAGTGTATAAGTCAGTTGAA 108
                       *   *** * ** **           * **    * *   * * * *   ** *  *  

consensus_9742#0      -CTGCAGGGCTGTA-CAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTC 234
consensus_9742#4      TCTGCAGGGCTGTATCAAAGTCCTTTC--------------------------------- 123
consensus_9742#1      -CTG-ACGGCTGTA-CAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTC 192
consensus_9742#2      -CTGCAGGGCTGTA-CAAAGTAATTTCGTCGTTGTCGAATAGCACTGGAAGATACATGTC 154
consensus_9742#3      CATGAACTACAGTC-TGGTGTGCATGCTTTATCAGTTATAGCTAGAGCAATTGATGAACC 167
                        ** *   * **      **   * *                                 

consensus_9742#0      TTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGT 294
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      TTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGT 252
consensus_9742#2      TTCAAGTGCCGGTCCAGTAGAATCTCGATTAAACCGGGTTTTATCTCAGAAGTTTAATGT 214
consensus_9742#3      TTTGGATATACATACGTCTCCACCCTGCCAGAA--GTCTTTGTTATAAGGTGTTTGCCAA 225
                                                                                  

consensus_9742#0      AAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTC 354
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      AAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTC 312
consensus_9742#2      AAATTCTTCAACTTTCACTCACTCTTCAGCCGACCTTTTTGAGAATATATAACGAAAGTC 274
consensus_9742#3      GGTAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACATACTTGTACTAAAATTC 285
                                                                                  

consensus_9742#0      ATCGT-CATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAAT 413
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      ATCGT-CATAACCAGAAAATAGGCATATCAGTTCTGATAAAACTCTAACATTTTATCAAT 371
consensus_9742#2      ATCGT-CATAACCAGAAAATAGG------------------------------------- 296
consensus_9742#3      ATTATTCAGAGCTGCAGAAATCCTTCGATTGAATAATTGTTGATATAATATTTTAGGAGG 345
                                                                                  

consensus_9742#0      GCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCT 473
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      GCTTGTAGGTATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCT 431
consensus_9742#2      ---------TATAGAGACGCATTTTAGGGTTGTAATCGTGTCTCATCATTTTAATAATCT 347
consensus_9742#3      AGCTATCGGCTAAGTGTAAGGTATATAGGTGTCTAATAAGAATGCCTATCAGTGCTAATT 405
                                                                                  

consensus_9742#0      TTCTCCTGTACAG--------------------------------------AACGCTTAG 495
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      TTCTCCTGTACAGGTAAGATTTATTCTATCAGTATGTATTAGTATAGAGAGAACGCTTAG 491
consensus_9742#2      TTCTCCTGTACAG----------------------------------AGAGAACGCTTAG 373
consensus_9742#3      CTATCAAATATTGTCCAAGCTC-----------------------------ACGGGATAA 436
                                                                                  

consensus_9742#0      TGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTA 555
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      TGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTA 551
consensus_9742#2      TGTATAAGTCAGTTGAACATGAACTACAGTCTGGTGTGCATGCTTTATCAGTTATAGCTA 433
consensus_9742#3      TCCACTAGTTAAT-GTACATATTTTCTTTTTAAATACATACAGTTCC------------- 482
                                                                                  

consensus_9742#0      GAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTAT 615
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      GAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGTTAT 611
consensus_9742#2      GAGCAATTGATGAACCTTTGGATATACATACGTCTCCACCCTGCCAGAAGTCTTTGNTAT 493
consensus_9742#3      ------------------------------------------------------------
                                                                                  

consensus_9742#0      AAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGCGCTAATTCTATCAAATATTNG 675
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      AAGGTGTTTGCCAAGG--TAAGTGGGTCCTCGTTATAGATATATGCCAATCAGAACACAT 669
consensus_9742#2      AAGGTGTTTGCCAAGTGTCTAATAAGAATGCCTATCAGTGCTAATTCTATCANATATTGT 553
consensus_9742#3      ------------------------------------------------------------
                                                                                  

consensus_9742#0      CCAAGCTCACGGGATAATCCACTAGTTTATGTACATATTTTCCTTTTTAATACATACAGN 735
consensus_9742#4      ------------------------------------------------------------
consensus_9742#1      ACTTGTACTAAAA----------------------------------------------- 682
consensus_9742#2      CCAAGCTCACGGGATAATCCACTAGTTAATGTACATATTTTC-TTTNTAATACATACAGT 612
consensus_9742#3      ------------------------------------------------------------
                                                                                  

consensus_9742#0      CGCTGTATTTTCAGTAATATTATGGTA 762
consensus_9742#4      ---------------------------
consensus_9742#1      ---------------------------
consensus_9742#2      TC------------------------- 614
consensus_9742#3      ---------------------------