cluster # 9756

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Schistosoma mansoni
cluster # 9756 cluster # 9756 Sequences # 11 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9756#0 length = 883 sequences # 9

consensus_9756#1 length = 590 sequences # 1
consensus_9756#2 length = 143 sequences # 1

consensusID : consensus_9756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 883
fasta sequence

                              [AATAATGACATGATCACAACTTATGCCTCAAATTCTAAATATCGACGGTCTTCTGTTTACAGGTTTTACATTCAAGGTAACCAGTTTGATATATCCAAATGGAAAGATAGCGTTCTATTATGATGAAGTTGCTAAGGAATTTCAGAAAGATGACGTGTATTCGTTGTTTAGTGGTGTGTTTACGTGTGGCGAAAATAGAGATGATGAATGGGCCGAAGTAGAAGTTCCTAAAAAATGGATCCAA-AGTGGCACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATTGGCCTTGCCATTTGTCTGTGGTTATACAGAAGGGAGTAATGCAATCCATGGCTCACAGAAAAGTTTGATCGCTTGCTTTCATCATGCTGACATTGGTATTTTCATCTTGTTTGTAATCACATACGTCTTATATTGTGTAATTCATTTCAATGAGATGGAAACTGTTTCATAGGACTATTTAACACTTTCATAAGTGTTTCCCTTAATAATTGATGTATTTTGTGGTTA]

[+] EMBL CD124116             [AATAATGACATGATCACAACTTATGCCTCAAATTCTAAATATCGACGGTCTTCTGTTTACAGGTTTTACATTCAAGGTAACCAGTTTGATATATCCAAATGGAAAGATAGCGTTCTATTATGATGAAGTTGCTAAGGAATTTCAGAAAGATGACGTGTATTCGTTGTTTAGTGGTGTGTTTACGTGTGGCGAAAATAGAGATGATGAATGGGCCGAAGTAGAAGTTCCTAAAAAATGGATCCAA AGTGGCACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCACTGCTAGTAATGACAAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCGATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACANACGGATTGTCCAAAACTACTC                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD124166             [ ATAATGACATGATCACAACTTATGCCTCAAATTCTAAATATCGACGGTCTTCTGTTTACAGGTTTTACATTCAAGGTAACCAGTTTGATATATCCAAATGGAAAGATAGCGTTCTATTATGATGAAGTTGCTAAGGAATTTCAGAAAGATGACGTGTATTCGTTGTTTAGTGGTGTGTTTACGTGTGGCGAAAATAGAGATGATGAATGGGCCGAAGTAGAAGTTCCTAAAAAATGGATCCAA AGTGGCACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCACTGCTAGTAATGACAAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTAAACCTGACCTAACAAACGGATTGTCCAAAACTACTCA                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD114404             [                                                                                                                                                                                                                                                 CAAGAGTGGTACGTTGGGGGAGCATGAAGTTCACGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCACTGTTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTTGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTTATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGGCAAAGAGTCCCCTG                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD114536             [                                                                                                                                                                                                                                                        GGTACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCCCTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAATAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTG                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD114579             [                                                                                                                                                                                                                                                                     AGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAATATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTG                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD114558             [                                                                                                                                                                                                                                                                     AGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCCCTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAATAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTG                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD115812             [                                                                                                                                                                                                                                                                         TGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATTGGCCTTGCCATTTGTCTGTGGTTATACAGAAGGGAGTAATGCAATCCATGGCTCACAGAAAAGTTTGATCGCTTGCTTTCATCATGCTGACATTGGTATTTTCATCTTGTTTGTAATCACATACGTCTTATATTGTGTAATTCATTTCAATGAGATGGAAACTGTTTCATAGGACTATTTAACACTTTCATAAGTGTTTCCCTTAATAATTGATGTATTTTGTGGTTA]
[+] EMBL CD154106             [                                                                                                                                                                                                                                                                         TGAAGTTCTCGGTGATTGTTCAAAACACAATTCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATTGGCCTTGCCATTTGTCTGTGGTTATACAGAAGGGAGTAATGCAATCCATGGCTCACAGAAAAGTTTGATCGCTTGCTTTCATCATGCTGACATTGTTATTTTCATCTTGTTTGTAATCACATACGTCTTATATTGTGTAATTCATTTCAATGAGATGGAAACTGTTTCATAGAACTATANTACACTTTCATAAGTG TTCCCTTAATAATTGATGTATTTTGntg   ]
[-] EMBL CD159395             [                                                                                                                                                                                                                                                                                                                                                                                                  GATAATCATGAATTCAAAATAAATGGTTGCCAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAAAAACAATCACAGGTATCACTGAACCTGACCTAGCAAACGGATTGTCCAAAACTACTCAAACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAAGAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATTGGCCTTGCCATTCGTCTGTGGTTATACAGAAG                                                                                                                                                                                                    ]




>consensus_9756#0
AATAATGACATGATCACAACTTATGCCTCAAATTCTAAATATCGACGGTCTTCTGTTTAC
AGGTTTTACATTCAAGGTAACCAGTTTGATATATCCAAATGGAAAGATAGCGTTCTATTA
TGATGAAGTTGCTAAGGAATTTCAGAAAGATGACGTGTATTCGTTGTTTAGTGGTGTGTT
TACGTGTGGCGAAAATAGAGATGATGAATGGGCCGAAGTAGAAGTTCCTAAAAAATGGAT
CCAAAGTGGCACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAATTCGAT
TAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAATCCGA
TATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGCCAGGT
TGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGAGAAAC
AATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAAACAGC
TGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAGTCAAA
GAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATTGGCCT
TGCCATTTGTCTGTGGTTATACAGAAGGGAGTAATGCAATCCATGGCTCACAGAAAAGTT
TGATCGCTTGCTTTCATCATGCTGACATTGGTATTTTCATCTTGTTTGTAATCACATACG
TCTTATATTGTGTAATTCATTTCAATGAGATGGAAACTGTTTCATAGGACTATTTAACAC
TTTCATAAGTGTTTCCCTTAATAATTGATGTATTTTGTGGTTA

consensusID : consensus_9756#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence

                              [CGACCAACGTTATCTGTTTTATTTTCCAGCATTCCTGAGATTACTCTGCATGCTCCTTTCGTACTCAAAGTACCTCCTGGCCTGACGCGAACCGCTACACATCGGTCCCCCAGACTTCTAGTTGTAGACGAAGCCTATTTTGATTTATTGGCATCCCCATGTAACTTTATCAATGCCACAAAAGCAACTGTTTGTTTGTGCTTTGTATGATTATAACCGCCAACATACTGACGAGCTTTCATTTAAAAAAGGCGACATACTGAGAGTTTTGAAACAATTAGAAGGTGGTTGGTGGGAAGGTAGCTTGAATGGATTTGTTGGCTGGTTTCCTAGTAACTACGTAACACATGCTACTAGTTTAGATGAGAAGGGTAATCCCACTACTGATGAAAGTTCGTTGATACACTTACAAAACTTTCAAAACGAGATTATACAGCATGTTTTAGAAGGTGAATTAAGACAAGTTAGTGAACTGTCTCAGTTATTGTCAGTATTTACGGTTAACCTGGAGCCTCTACTTCACTTATCATTCTTAAACAAACTCGTCAATTTAAGAGACATATTATTTCANATTATTAGTATACATCAAC]

[+] EMBL CD201882             [CGACCAACGTTATCTGTTTTATTTTCCAGCATTCCTGAGATTACTCTGCATGCTCCTTTCGTACTCAAAGTACCTCCTGGCCTGACGCGAACCGCTACACATCGGTCCCCCAGACTTCTAGTTGTAGACGAAGCCTATTTTGATTTATTGGCATCCCCATGTAACTTTATCAATGCCACAAAAGCAACTGTTTGTTTGTGCTTTGTATGATTATAACCGCCAACATACTGACGAGCTTTCATTTAAAAAAGGCGACATACTGAGAGTTTTGAAACAATTAGAAGGTGGTTGGTGGGAAGGTAGCTTGAATGGATTTGTTGGCTGGTTTCCTAGTAACTACGTAACACATGCTACTAGTTTAGATGAGAAGGGTAATCCCACTACTGATGAAAGTTCGTTGATACACTTACAAAACTTTCAAAACGAGATTATACAGCATGTTTTAGAAGGTGAATTAAGACAAGTTAGTGAACTGTCTCAGTTATTGTCAGTATTTACGGTTAACCTGGAGCCTCTACTTCACTTATCATTCTTAAACAAACTCGTCAATTTAAGAGACATATTATTTCANATTATTAGTATACATCAAC]




>consensus_9756#1
CGACCAACGTTATCTGTTTTATTTTCCAGCATTCCTGAGATTACTCTGCATGCTCCTTTC
GTACTCAAAGTACCTCCTGGCCTGACGCGAACCGCTACACATCGGTCCCCCAGACTTCTA
GTTGTAGACGAAGCCTATTTTGATTTATTGGCATCCCCATGTAACTTTATCAATGCCACA
AAAGCAACTGTTTGTTTGTGCTTTGTATGATTATAACCGCCAACATACTGACGAGCTTTC
ATTTAAAAAAGGCGACATACTGAGAGTTTTGAAACAATTAGAAGGTGGTTGGTGGGAAGG
TAGCTTGAATGGATTTGTTGGCTGGTTTCCTAGTAACTACGTAACACATGCTACTAGTTT
AGATGAGAAGGGTAATCCCACTACTGATGAAAGTTCGTTGATACACTTACAAAACTTTCA
AAACGAGATTATACAGCATGTTTTAGAAGGTGAATTAAGACAAGTTAGTGAACTGTCTCA
GTTATTGTCAGTATTTACGGTTAACCTGGAGCCTCTACTTCACTTATCATTCTTAAACAA
ACTCGTCAATTTAAGAGACATATTATTTCANATTATTAGTATACATCAAC

consensusID : consensus_9756#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 143
fasta sequence

                              [ANATAGTGTACCTTTTGTATCATGATTCATTGAGGTATTGTAGGTTANTCTATTTCCCGAAAGGTCCTCGATTTCACATAGTCCACNCTATTAANCGTAATTAGTTAGTGAGGTNGGATAAGTCACNGACTTTTTTTTNTTAN]

[+] EMBL AA559378             [ANATAGTGTACCTTTTGTATCATGATTCATTGAGGTATTGTAGGTTANTCTATTTCCCGAAAGGTCCTCGATTTCACATAGTCCACNCTATTAANCGTAATTAGTTAGTGAGGTNGGATAAGTCACNGACTTTTTTTTNTTAN]




>consensus_9756#2
ANATAGTGTACCTTTTGTATCATGATTCATTGAGGTATTGTAGGTTANTCTATTTCCCGA
AAGGTCCTCGATTTCACATAGTCCACNCTATTAANCGTAATTAGTTAGTGAGGTNGGATA
AGTCACNGACTTTTTTTTNTTAN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9756#0      AATAATGACATGATCACAACTTATGCCTCAAATTCTAAATATCGACGGTCTTCTGTTTAC 60
consensus_9756#2      -------------ANATAGTGTACCTTTTGTATCATGATTCATTGAGGTATTGTAGGTTA 47
consensus_9756#1      -------CGACCAACGTTATCTGTTTTATTTTCCAGCATTCCTGAGATTACTCTGCATGC 53
                                           *               * *        *  * *   *  

consensus_9756#0      AGGTTTTACATTCAAGGT---AACCAGTTTGATATATCCAAATGGAAAGATAGCGTTCTA 117
consensus_9756#2      NTCTATTTCCCGAAAGGT---CCTCGATTTCACATAGTC--------------CACNCTA 90
consensus_9756#1      TCCTTTCGTACTCAAAGTACCTCCTGGCCTGACGCGAACCGCT----ACACATCGGTCCC 109
                         * *       ** **           * *      *              *   *  

consensus_9756#0      TTATGATGAAGTTGCTAAGGAATTTCAGAA--AGATGACGTGTATTCGTTGTTTAGTGGT 175
consensus_9756#2      TTA-ANCGTAATTAGTTAGTGAGGTNGGAT--AAGTCACNGACTTTTTTTTNTTAN---- 143
consensus_9756#1      CCAGACTTCTAGTTGTAGACGAAGCCTATTTTGATTTATTGGCATCCCCATGTAACTTTA 169
                        *         *  *     *             * *      *       * *     

consensus_9756#0      GTGTTTACGTGTGGCGAAAATAGAGATGATGAATGGGCCGAAGTAGAAGTTCCTAAAAAA 235
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      TCAATGCCACAAAAGCAACTGTTTGTTTGTGCTTTGTATGATTATAACCGCCAACATACT 229
                                                                                  

consensus_9756#0      TGGATCCAAAGTGGCACGTTGGTGGAGCATGAAGTTCTCGGTGATTGTTCAAAACACAAT 295
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      GACGAGCTTTCATTTAAAAAAGGCGACATACTGAGAGTTTTGAAACAATTAGAAGGTGGT 289
                                                                                  

consensus_9756#0      TCGATTAACACATGTGAAGATGCAAAAACACCAGACAAAACGTGTATTTGGTGCGAAAAA 355
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      TGGTGGGAAGGTAGCTTGAATGGATTTGTTGGCTGGTTTCCTAGTAACTACGTAACACAT 349
                                                                                  

consensus_9756#0      TCCGATATATGCAGTGCTAGTAATGACGAGGATAATCATGAATTCAAAATAAATGGTTGC 415
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      GCTACTAGTTTAGATGAGAAGGGTAATCCCACTACTGATGAAAGTTCGTTGATACACTTA 409
                                                                                  

consensus_9756#0      CAGGTTGAAAGTAGCTCGATTGTCGACGCTTCGATTGAACCAACACTTATCAATCAAAGA 475
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      CAAAACTTTCAAAACGAGATTATACA-GCATGTTTTAGAAGGTGAATTAAGACAAGTTAG 468
                                                                                  

consensus_9756#0      GAAACAATCACAGGTATCACTGAACCTGACCTAACAAACGGATTGTCCAAAACTACTCAA 535
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      TGAACTGTCTCAGTTATTGTCAGTATTTACGGTTAACCTGGAGCCTCTACTTCACTTATC 528
                                                                                  

consensus_9756#0      ACAGCTGAGTCTCATTCGAATAAGACTACAGGAACAACTGAAAATAGAGAACAAAGAGAG 595
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ATTCTTAAACAAACTCGTCAATTTAAGAGACATATTATTTCANATTATTAGTATACATCA 588
                                                                                  

consensus_9756#0      TCAAAGAGTTCCCTGTACATCATTATACCACTTGTTGTCGTTTTCTTCGTTGTATGCATT 655
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      AC---------------------------------------------------------- 590
                                                                                  

consensus_9756#0      GGCCTTGCCATTTGTCTGTGGTTATACAGAAGGGAGTAATGCAATCCATGGCTCACAGAA 715
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      AAGTTTGATCGCTTGCTTTCATCATGCTGACATTGGTATTTTCATCTTGTTTGTAATCAC 775
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      ATACGTCTTATATTGTGTAATTCATTTCAATGAGATGGAAACTGTTTCATAGGACTATTT 835
consensus_9756#2      ------------------------------------------------------------
consensus_9756#1      ------------------------------------------------------------
                                                                                  

consensus_9756#0      AACACTTTCATAAGTGTTTCCCTTAATAATTGATGTATTTTGTGGTTA 883
consensus_9756#2      ------------------------------------------------
consensus_9756#1      ------------------------------------------------