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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 728 fasta sequence
[CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA-GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAACT]
[-] EMBL CD178447 [CAAATCTAATAGAGCGGTACTATGACTGTGGATCGATGTATATACGTTGGGAACATTAATCCAGCAATAACAGCTGATATCTTGTACGNACTTTTTCTCCAGGCTGGGCCTTTGGAAGGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACATTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACC ]
[+] EMBL CD200976 [ GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTGCGGATAGCATCAAGGCTTTTCAACAGTATA ]
[+] EMBL CD200927 [ GGTGTTACCGTTAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGANAACCGTTT ]
[+] EMBL CD179076 [ TAAAGACACATTCGCCTTCGTAACGTTTGAGGATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC ]
[+] EMBL CD137328 [ GATGAAGAGTCTGTCCCATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCAGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTT ]
[-] EMBL CD195366 [ ATATGCTTGCTCNC TTTGAAAGGGATCACCTTATACGGTACGGANCTGA NATCCGTNCAAGACANAACTNTAAG TTCAGGGATCTAAAGATACGTTCTGTCCCACCTTCTGCCTACCAG TTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCAACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGGATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGTATATGAAC ]
[+] EMBL CD178966 [ ATATGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACCCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTAC ]
[-] EMBL CD194940 [ TGCTTGCTCACTTTTTGAAGGGATCACCTTATACGGTACGGAACTGAGAATCCGTCCAAGTCAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAA ]
[-] EMBL CD179813 [ ATCTGTCCAAGAC AAACTTGTAGTTGCA GGATCTATAGATACGTTNTGTTCGACAGTTTGCTTACACGTTTTCAAGGCCTGTAGTTGACCATTATTATTCAGCACCAAGTCACTGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCTTGAGTTTTACTCCACATGCGGGTACCCGACATTTGGCTCATGAAATTGCATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCAGTATGGTAGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAATAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTCTCAACAGTATATGAACT]
[+] EMBL CD188224 [ CCAAGACAAAACTCTAAGTTTCA GGATCTAAAGATACGTTCTGTTCCACCTTCTGCCTACCAGTTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACT ]
[-] EMBL CD198609 [ TTTTTCAGGCCTCGAGTTGACCCTTCTTATTCAGCACCAATTCACCGAAGTCATTTCAATGAGAGTACGGACTATGTTAATCATACTAGTCACCGTCGTGATCCATTCCTGAGTTTTACTCCACCTGCGGGTAACCGACATTTGGCTCATGAAATTGGATATAACTATTACTCACGATATGAACATAACCTACATCCTTTACCATCATATGACCTTCCTCCGTATGGTTGGCAACACGGTCCTCCAGTCCCCCTTGAAAACCGTTTGTCTGAAAGAAGACGGTCTAATGAATACAGTAGACACATGAGCTCCGCACCGACTGCTAGTCGTAGAGAACGTAGTCCCTACTCTCGTTACAGCAGTTCCAGACCTGACAGTTCTTATAATAATCGGTACGGATAGCATCAAGGCTTTTCAACAGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||