cluster # 9939

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 9939 cluster # 9939 Sequences # 12 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9939#0 length = 981 sequences # 12
consensusID : consensus_9939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 981
fasta sequence
                              [TTGGGGCCTTATGGGGACGCGGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA-TACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT-GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT-TGGTCCTG-CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT-GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCATCGAGAATACACAGCATATACGACAAGCAGTAAAGAAGAGGTTAATACTGCTCC]

[+] EMBL CD200836             [TTGGGGCCTTATGGGGACGCGGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACAGTACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCATCGTGACCACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI975463             [                    GGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAAGGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA TACGTGATTGGTTGAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATCGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTTCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCA                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD200967             [                                                                   ATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACA TACGTGATTGGTTGAAAAAGTGTGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTTCGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGGCACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD200615             [                                                                                                                                                                                                                                                                           AAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGGATGGATCCAGTCTTGC TGGTCCTG CCAATAAAT                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD178997             [                                                                                                                                                                                                                                                                                                  CGTCGTGCAGGCCCACCCATTGATCGGTTTTCCACAAACTTGCGACGGCATTCCGGACGCGTTTCTAGTCGT GATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACA                                                                                                                                                                                                                                                                             ]
[+] EMBL CD061338             [                                                                                                                                                                                                                                                                                                                  CCATTGATCGGTTATCCACAAACTTGCAACGGCATTCCGGACGCGTATCTAGTCGTAGATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAACCAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACCAGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTTTCAGAAGTTGCTGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCTATGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCGAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTACCGTT                                                                                                                                                                              ]
[+] EMBL CD194013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGAATGGATCCAGTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTC                                                                                                                                       ]
[+] EMBL CD181607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTCTTCT TGGTCCTG CCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCA                                                      ]
[-] EMBL CD181467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTTC  TNGT CTGNCCAATAAATCANCTGAAGAGCCTATCGTCAAATCACCACC TATATGGGTGGCAATAATANCCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCAT                                                     ]
[-] EMBL CD120556             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTG GCAATAAATCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCCTTTGGATGATGCATTAATCCTACTTCATCGAGAATACACAGCATATACGACAAGCAGTAAAGAAGAGGTTAATACTGCTCC]
[+] EMBL CD194056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCAACTGAAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAATAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTC                                                                                                                                       ]
[+] EMBL CD188559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAACTGCAGAGCCTATCGTCAAATCACCACCTTATAT GGTGGCAGTAATAACCGTCCAGCATGATCTTGTTCCATATGCGGAAATTATAGAACAACGTGCGACTAAAACTCTAACTACACCAGGAAGTCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGCTGATCTTACCAAAGATGGCGTACCGTTCGCGATCATTTGCACTATGACTAATTGGGCACATAACTCGTGCACATTACGTATTCTTT                                                                                                                   ]




>consensus_9939#0
TTGGGGCCTTATGGGGACGCGGGACAAAAGTCCCACCGAGAGTAGTTGCCTGGTTGGGAA
GGTTTTGATCGAAGATTTGCCAAAACGAGCTATTTCTCATAATGACATACGTGATTGGTT
GAAAAAGTATGGGTGCATTTCAGAAATCGTAATATATCCGCGCTGCTTGCTTGTTCAGTT
CGACTCTGATATCGAGGCCGCTGGTGCTGTTCATTGCGAAAATGGGGCATCACTATTTGG
CACTAAAGTCTCTCTAAAGCATGTGGAAGCCAGTGATTTGAAAGCGCTGCGTCGTGCAGG
CCCACCCATTGATCGGTTTTCCACAAACTTGCAACGGCATTCCGGACGCGTTTCTAGTCG
TGATCGTGATCGGGAGAAAAGTCGCGGATCCTTGCACCGTGACCACTTCCGAGGCCGAAC
CAAGTCTCCGGACAACAAACGTTCACGTGACATCTCACCGCGTCGACACTCAAGGTCACC
AGTCATAACGCGTACTGATCGGCGTACAGTTCATCCGCTAAACTGGTTATCAGAAGTTGC
TGAACGAGACAAAAAGCTGAATGGATCCAGTCTTCTTGGTCCTGCCAATAAATCAACTGA
AGAGCCTATCGTCAAATCACCACCTTATATGGTGGCAATAATAACCGTCCAGCATGATCT
TGTTCCATATGCGGAAATTATAGAACAACGTGTTACTAAAACTCTAACTACACCAGGAAG
TCCTTCTGTTACTCATATAGTAGTTCTACTGTCTGTAGATCATCTTAGCCCGTGCCTAGC
TGATCTTACCAAAGATGGCGTTCCGTTCGCGATCATTTGCACTATGACTAATTGGGCACA
TAACTCGTGCACATTACGTATTCTTTACGCTCCGACCCAACAAGAGCATCGTAATATGCC
TTTGGATGATGCATTAATCCTACTTCATCGAGAATACACAGCATATACGACAAGCAGTAA
AGAAGAGGTTAATACTGCTCC
clustalw multiple alignements is not computed in this case