cluster # 9946

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Schistosoma mansoni
cluster # 9946 cluster # 9946 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9946#0 length = 1030 sequences # 9

consensus_9946#1 length = 476 sequences # 1
consensus_9946#2 length = 345 sequences # 2

consensusID : consensus_9946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1030
fasta sequence

                              [TGGCACGTTATCAATTTGGATCGTTGTAAAGATCCTTCGGTATACTTTTTAAAAAGTACTTCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAAAAACAATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTACGGACGACCGGAAATTCAAGT-TCAA-GCCTTC-GAAAAAGGACAAGAAATTAATTTTGACGTCGTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGTGATCAAATTGTGTTACTTATGCAAGTTGAAGAAAAAATTAAGGAGTGTGATCTATCTCGTGGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTACTGTTCGATTATGACAAAAAGCATGATTGTATGAACTCCAACTTATTCGACCGAACTCTTAATGCATTCGATCGTGTATTTGATCTGTTAAATGAAATAAATATTCAACTGATTGCATTGGATTCTAATGATGATGAATCATTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAGAAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTACTATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGT]

[+] EMBL CD115562             [TGGCACGTTATCAATTTGGATCGTTGTAAAGATCCTTCGGTATACTTTTTAAAAAGTACTTCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAAAAACAATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTACGGACGACCGGAAATTCAAGTGTCAACGCCTTCAGAAAAAGGACAAGAAATTAATTTTGACGTCGTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGTGATCAAATTGTGTTACTAATGCAAGTTGAAGAAAAAATTAAGGAGTGTGATCTATCTCGTGGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTACTGTTCGATTATGACAAAAAGCATGATTGTATGAACTCCAACTTATTCGACCGAACTCTTAATGCATTCGATCGTGTATTTGATCTGTTAAATGAAATAAATATTCAACTGATTGCATTGGATTCTAATGATGATGAATCATTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD067394             [                      GTTGTAAAGATCCTTCGGTATACTTTCTAAAAAGTACTTCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAAAAACAATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTACGGACGACCGGAAATTCAAGT TCAA GCCTTC GAAAAAGGACAAGAAATTAATTTTGACGTCGTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGTGATCAAATTGTGTTACTTATGCAAGTTGAAGAAAAAATTAAGGAGTGTGATCTATCTCGTGGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD131585             [                                          TACTTTTTAAAAAGTACTTCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAAAAACGATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTACGGACGACCGGAAATTCAAGT TCAA GCCTTC GAAAAAGGACAAGAAATTAATTTTGACGTCGTAGTTAAGAAAATGACAGAAATTTTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD113686             [                                                                                                                                                                                                                              CAAGAAATTAA TTTGACGTCGTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGTGATCAAATTGTGTTACTTATGCAAGTTGAAGAAACAATTAAGGAGTGTGATCTATCTCGTGGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTACTGTTCGATTATGACAAAAAGCATGATTGTATGAACTCCAACTTATTCGACCGAACTCTTAATGCATTCGATCGTTTATTTGATCTGTTAAATGAAATAAATATTCAACTGATTGCATTGGATTCTAATGATGATGAATCATTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAGAAAGAATATCCTCC                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD115518             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTGCATTGGATTCTAATGATGATGAATCATTTGAGCAAGACCGGTACCGTATCAGAGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAGAAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTAGTATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTGACACTTTAGTTATTCAAAAGCTTTGCGAATATATTTATTTAAATGATC                                                                                                                                    ]
[-] EMBL CD067101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCTAATGATGATGAATCATTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAGAAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTACTATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGT]
[+] EMBL CD197638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAGAAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTACTATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCCATTGAACATGCTGA     ]
[-] EMBL CD197560             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCATCTATTCTGACTGTGGTGGGTCTTTTAGATGTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGACTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGACTATTTGGAAAAGAAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTACTATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGAC    ]
[-] EMBL CD067336             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTTGGATTTTGAATGGGGTCGCAAAGTGGAAGCTTCCAGTATGCAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAGCTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTATATGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTTATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGT]




>consensus_9946#0
TGGCACGTTATCAATTTGGATCGTTGTAAAGATCCTTCGGTATACTTTTTAAAAAGTACT
TCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAA
AAACAATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTAC
GGACGACCGGAAATTCAAGTTCAAGCCTTCGAAAAAGGACAAGAAATTAATTTTGACGTC
GTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGT
GATCAAATTGTGTTACTTATGCAAGTTGAAGAAAAAATTAAGGAGTGTGATCTATCTCGT
GGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTACTGTTCGATTATGACAAAAAG
CATGATTGTATGAACTCCAACTTATTCGACCGAACTCTTAATGCATTCGATCGTGTATTT
GATCTGTTAAATGAAATAAATATTCAACTGATTGCATTGGATTCTAATGATGATGAATCA
TTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGAT
GTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGA
CTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAG
AAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTAC
TATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGA
CTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGA
ACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAAT
CAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACAT
GCTGACCAGT

consensusID : consensus_9946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 476
fasta sequence

                              [CTGTAGTCTAATTGTCTAGTGCATCAAGGTCGTAGTTGCCCGCATTGTGTATCGATCGAGTAACTAGTTTACTATCTAGTCTAGTGTTATTGTATTACCGTATTACACAACAGATTTTCAGGCGAAATAATCTTTAGTAACAAATTTCTAGTATCAATACTTTTTAACAGTCGAAGTAGAAGGTTTCTAACGAATTTGGATTTGACCCTATATCATTCACTTATTTTGCTGTGAGCAGCTGGATGGTGACAAATCATGAACTTTCACAAAATGAGCGGATGACAGGGCTGAATAAATTAGCTTGTATTAAATAATTAATTTACAGTTGTATTATAAATCCACAAAAACTATTCAAACAGCGTTTTTGTCTTATTGTTCTAACAAAAAAAGATTGAAACCATACCGGTCGAATAAGTTGGAGTTCATACAATCATGCTTTTTGTCATAATCGAACAGTACGCTGATAAAAGCGAATA]

[+] EMBL CD184768             [CTGTAGTCTAATTGTCTAGTGCATCAAGGTCGTAGTTGCCCGCATTGTGTATCGATCGAGTAACTAGTTTACTATCTAGTCTAGTGTTATTGTATTACCGTATTACACAACAGATTTTCAGGCGAAATAATCTTTAGTAACAAATTTCTAGTATCAATACTTTTTAACAGTCGAAGTAGAAGGTTTCTAACGAATTTGGATTTGACCCTATATCATTCACTTATTTTGCTGTGAGCAGCTGGATGGTGACAAATCATGAACTTTCACAAAATGAGCGGATGACAGGGCTGAATAAATTAGCTTGTATTAAATAATTAATTTACAGTTGTATTATAAATCCACAAAAACTATTCAAACAGCGTTTTTGTCTTATTGTTCTAACAAAAAAAGATTGAAACCATACCGGTCGAATAAGTTGGAGTTCATACAATCATGCTTTTTGTCATAATCGAACAGTACGCTGATAAAAGCGAATA]




>consensus_9946#1
CTGTAGTCTAATTGTCTAGTGCATCAAGGTCGTAGTTGCCCGCATTGTGTATCGATCGAG
TAACTAGTTTACTATCTAGTCTAGTGTTATTGTATTACCGTATTACACAACAGATTTTCA
GGCGAAATAATCTTTAGTAACAAATTTCTAGTATCAATACTTTTTAACAGTCGAAGTAGA
AGGTTTCTAACGAATTTGGATTTGACCCTATATCATTCACTTATTTTGCTGTGAGCAGCT
GGATGGTGACAAATCATGAACTTTCACAAAATGAGCGGATGACAGGGCTGAATAAATTAG
CTTGTATTAAATAATTAATTTACAGTTGTATTATAAATCCACAAAAACTATTCAAACAGC
GTTTTTGTCTTATTGTTCTAACAAAAAAAGATTGAAACCATACCGGTCGAATAAGTTGGA
GTTCATACAATCATGCTTTTTGTCATAATCGAACAGTACGCTGATAAAAGCGAATA

consensusID : consensus_9946#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 345
fasta sequence

                              [TTTTTCTGCCTCGGTAGTTAATATTGCATGCTGTTTTGCTGTTATTATTGTTACAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGTCAACTATGATCCTGTATAACCGTGCCATGGTTCAGTTAGGCTTAT]

[+] EMBL CD163797             [TTTTTCTGCCTCGGTAGTTAATATTGCATGCTGTTTTGCTGTTATTATTGTTACAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGTCAACTATGATCCTGTATAACCGTGCCATGGTTCAGTTAGGCTTA ]
[-] EMBL CD164015             [          TCGGTAG TAATATTGCATGCTG TTTGCTGTTA TATTGTTACAGTTTGA TTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTAACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGACTACGTACCAGAGCTATTCTCTGTCATATTTATCATTTGGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGTCAACTATGATCCTGTATAACCGTGCCATGGTTCAGTTAGGCTTAT]




>consensus_9946#2
TTTTTCTGCCTCGGTAGTTAATATTGCATGCTGTTTTGCTGTTATTATTGTTACAGTTTG
ATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAAGAAGTTGGACTTCATCCTA
ACACTTTAGTTATTCAAAAACTTTGCGAATATATTTATTTAAATGATCGAACAGATAGAC
TACGTACCAGAGCTATTCTCTGTCATATTTATCATTTAGCTCTTTATAATCAATGGTTCA
AAGCTCGTGACTTGATGCTTATGTCTGATTTGCAAATGTCAATTGAACATGCTGACCAGT
CAACTATGATCCTGTATAACCGTGCCATGGTTCAGTTAGGCTTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9946#0      TGGCACGTTATCAATTTGGATCGTTGTAAAGATCCTTCGGTATACTTTTTAAAAAGTACT 60
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      TCGGATGATAAAAAGGATAAAACGAAAATTAAGAAAATTGCAAAAGATCGATCAACTAAA 120
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      AAACAATTAAGAGCTTCATCTGATATAGAGGATGGAACATGGACTACAATTGATTCTTAC 180
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GGACGACCGGAAATTCAAGTTCAAGCCTTCGAAAAAGGACAAGAAATTAATTTTGACGTC 240
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GTAGTTAAGAAAATGACAGAAATTTTGGCAAGTCGTGGTAAAAAAGGTGCAAGTACCAGT 300
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GATCAAATTGTGTTACTTATGCAAGTTGAAGAAAAAATTAAGGAGTGTGATCTATCTCGT 360
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GGGTTACACGTTAAAGTTCTATTCGCTTTTATCAGCGTACTGTTCGATTATGACAAAAAG 420
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      CATGATTGTATGAACTCCAACTTATTCGACCGAACTCTTAATGCATTCGATCGTGTATTT 480
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GATCTGTTAAATGAAATAAATATTCAACTGATTGCATTGGATTCTAATGATGATGAATCA 540
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      TTTGAGCATGAACCGTACCGTATCAAAGCATCTATTCTGACTGTGGTGGGTCTTTTAGAT 600
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ------------------------------------------------------------
                                                                                  

consensus_9946#0      GTTGAATGTTTCAAAGTTCTGCAAAATGCCAACGGCCATGAGTCGGAATATGTTGACAGA 660
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      ---------------------------------------CTGTAGTCTAATTGTCTAGTG 21
                                                                                  

consensus_9946#0      CTTCGAGATGAACGAAGAGTCTGTAATATTATTGATCGTTTATGTGTCTATTTGGAAAAG 720
consensus_9946#2      ------------------------------------------------------------
consensus_9946#1      CATCAAGGTCGTAGTTGCCCGCATTGTGTATCGATCGAGTAACTAGTTTACTATCTAGTC 81
                                                                                  

consensus_9946#0      AAAGAATATCCTCCAGATGCACTCTGTGCTGCCTATCTTCATAAACTGGAACACATGTAC 780
consensus_9946#2      -----TTTTTCTGCCTCGGTAGTTAATATTGCATGCTGTTTTG--CTGTTATTATTGT-- 51
consensus_9946#1      TAGTGTTATTGTATTACCGTATT--ACACAACAGATTTTCAGGCGAAATAATCTTTAGTA 139
                            * *  *      * * *        *      *           *    *    

consensus_9946#0      TATAAGTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAA-GAAGTTGG 839
consensus_9946#2      TACA-GTTTGATTTTGAATGGGGTCGTAAAGTGGAAGCTTCCAGTATGGAA-GAAGTTGG 109
consensus_9946#1      ACAAATTTCTAGTATCAATACTTTTTAACAGTCGAAGTAGAAGGTTTCTAACGAATTTGG 199
                         *  **  * * * ***    *   * *** ****      ** *  ** *** ****

consensus_9946#0      ACTTCATCCTA-ACACTTTAGTTATTC-------AAAAACTTTGCGAATATATTTATTTA 891
consensus_9946#2      ACTTCATCCTA-ACACTTTAGTTATTC-------AAAAACTTTGCGAATATATTTATTTA 161
consensus_9946#1      ATTTGACCCTATATCATTCACTTATTTTGCTGTGAGCAGCTGGATGGTGACAAATCATGA 259
                      * ** * **** *   ** * *****        *  * **    *   * *  *  * *

consensus_9946#0      AATG--ATCGAACAGATAGACTACGTACCAGAGC----TATTCTCTGTCATATTTATCAT 945
consensus_9946#2      AATG--ATCGAACAGATAGACTACGTACCAGAGC----TATTCTCTGTCATATTTATCAT 215
consensus_9946#1      ACTTTCACAAAATGAGCGGATGACAGGGCTGAATAAATTAGCTTGTATTAAATAATTAAT 319
                      * *   *   **      **  **    * **      **   * * * * **   * **

consensus_9946#0      TTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTT---- 1001
consensus_9946#2      TTAGCTCTTTATAATCAATGGTTCAAAGCTCGTGACTTGATGCTTATGTCTGATTT---- 271
consensus_9946#1      TTACAGTTGTATTATAAATCCACAAAAACTATTCAAACAGCGTTTTTGTCTTATTGTTCT 379
                      ***    * *** ** ***     *** **  * *      * ** ***** ***     

consensus_9946#0      -GCAAATGTCAATTGAA--CATGCTGACCAGT---------------------------- 1030
consensus_9946#2      -GCAAATGTCAATTGAA--CATGCTGACCAGTCAACTATGATCCTGTATAACCGTGCCAT 328
consensus_9946#1      AACAAAAAAAGATTGAAACCATACCGGTCGAATAAGTTGGAGTTCATACAATCATGCTTT 439
                        ****     ******  *** * *  *                               

consensus_9946#0      -------------------------------------
consensus_9946#2      GGTTCAGTTAGGCTTAT-------------------- 345
consensus_9946#1      TTGTCATAATCGAACAGTACGCTGATAAAAGCGAATA 476