cluster # 10063

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Anopheles gambiae
cluster # 10063 cluster # 10063 Sequences # 26 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10063#0 length = 604 sequences # 6
consensus_10063#1 length = 493 sequences # 2
consensus_10063#2 length = 488 sequences # 2

consensus_10063#3 length = 446 sequences # 12
consensus_10063#4 length = 421 sequences # 3
consensus_10063#5 length = 114 sequences # 1

consensusID : consensus_10063#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 604
fasta sequence

                              [CCGGACCTTACGTCAAGTGACGAAGTGTCAAAATGCTCTAGATTCCACCACCTGATATTTTTAATCCACCTTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGTAAACGCTTGCTTGCTTTTTTATTCAGGAG]

[+] EMBL BM585267             [CCGGACCTTACGTCAAGTGACGAAGTGTCAAAATGCTCTAGATTCCACCACCTGATATTTTTAATCCACCTTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGTAAACGCTTGCTTGCTTTTTTATTCAGGAG]
[+] EMBL BM641139             [                                                     ccgATTTTTAATCCACCTTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG                                                                                                       ]
[+] EMBL BM587926             [                                                                      ccGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATT    CATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACAACATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGACCAG                                                                                                  ]
[+] EMBL BM642035             [                                                                              ccgCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAG                                                                 ]
[+] EMBL BM602022             [                                                                                       ccgACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGTAAAC                         ]
[+] EMBL BM633598             [                                                                                               ccgGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGT                             ]




>consensus_10063#0
CCGGACCTTACGTCAAGTGACGAAGTGTCAAAATGCTCTAGATTCCACCACCTGATATTT
TTAATCCACCTTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCAT
ACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTG
GTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAG
CCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGG
TTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATT
TGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAAT
ATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACAT
AATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGT
AAAATGGTGTAATAATAATATCGTGTAAAATTAGTAAACGCTTGCTTGCTTTTTTATTCA
GGAG

consensusID : consensus_10063#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 493
fasta sequence

                              [CCGGTTTACACAATATTACCAAATCAATCGACAGGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGT]

[+] EMBL BM580223             [CCGGTTTACACAATATTACCAAATCAATCGACAGGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATCGTGTAAAATTAGT]
[+] EMBL BM587980             [                  CCGAATCAATCGAAAGGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG                                                                          ]




>consensus_10063#1
CCGGTTTACACAATATTACCAAATCAATCGACAGGCATACTTATTGGTGTTTAGGGTGGT
TTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGG
AATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAA
AGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATT
CGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAA
GAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATA
TTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGA
TCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAGTAAAATGGTGTAATAATAATATC
GTGTAAAATTAGT

consensusID : consensus_10063#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 488
fasta sequence

                              [CCGGGGTAATCACTCAAAACATGGCTCTCTATTCCAACCTAAGAACATTTTAGTTCGTCTCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCGG]

[+] EMBL BM636453             [CCGGGGTAATCACTCAAAACATGGCTCTCTATTCCAACCTAAGAACATTTTAGTTCGTCTCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG                                            ]
[+] EMBL CNS08CF7             [                                                         gtaaATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGGACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGAAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCGG]




>consensus_10063#2
CCGGGGTAATCACTCAAAACATGGCTCTCTATTCCAACCTAAGAACATTTTAGTTCGTCT
CATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGAT
TTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAAC
GAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCC
AGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAA
ATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTA
AATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAA
CATAATAAACATATTTCAAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACA
TGTGCCGG

consensusID : consensus_10063#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 446
fasta sequence

                              [CCGCGGACGCGTGGGTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGG]

[+] EMBL BM582329             [CCGCGGACGCGTGGGTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTGG]
[+] EMBL BM636373             [              ccGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATT    CATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG ]
[+] EMBL BM610192             [                ccgCACAATCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG ]
[+] EMBL BM642755             [                ccgCACAACCATCACCATACGTACTAGAGCAGATTAAGATT    CATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCA                          ]
[+] EMBL BM642982             [                  ccgCAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG ]
[+] EMBL BM647061             [                  ccgCAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAACATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCA       ]
[+] EMBL BM634321             [                   ccgAACCATCACCATACGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG ]
[+] EMBL BM632098             [                          cgacCCACGCGTCC  GAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCA                          ]
[+] EMBL BM592141             [                                ccgCGTACTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCAT                                                                                                                                                                              ]
[+] EMBL BM623511             [                                       ccgGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG ]
[+] EMBL BM629153             [                                                                                                                                                                     TCACCCTTTGAGCCACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCCTGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCCAGAATCCGGCAGAGATTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTG                                                        ]
[+] EMBL BM601416             [                                                                                                                                                                         CCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGA                               ]




>consensus_10063#3
CCGCGGACGCGTGGGTGGACACAACCATCACCATACGTACTAGAGCAGATTAAGATTGTA
GCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGA
TTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAA
CGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCC
CAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAA
AATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCT
AAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCA
ACATAATAAACATATTTCAAATGTGG

consensusID : consensus_10063#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 421
fasta sequence

                              [CCGCGGACGCGTGGGCTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]

[+] EMBL BM619146             [CCGCGGACGCGTGGGCTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]
[+] EMBL BM645685             [CCGCCCACGCGT   C CGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]
[+] EMBL BM634056             [            ccGCTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]




>consensus_10063#4
CCGCGGACGCGTGGGCTAGAGCAGATTAAGATTGTAGCATACTTATTGGTGTTTAGGGTG
GTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTTGGTGAACTTGCTAAGGTACGT
GGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGAGCCTTTGCGAATGTCATTAGC
AAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAGGTTTTCATCGTGGCTCCTCCA
TTCGTCATGGGATACATGGTTTACAACTATATCGAAAATTTGCACACCCAGATGAATCGC
AAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCA
TATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGT
G

consensusID : consensus_10063#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 114
fasta sequence

                              [CCGCCCACGCGTCCGACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]

[+] EMBL BM590202             [CCGCCCACGCGTCCGACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG]




>consensus_10063#5
CCGCCCACGCGTCCGACGATTCTTAAGCTAAATATCTAGGTGATGCTATAGCATATTTGG
AAAATATGTCACATGAAGGCATGATAGCAACATAATAAACATATTTCAAATGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10063#0      CCGGACCTTACGTCAAGTGACGAAGTGTCAAAATGCTCTAGATTCCACCACCTGATATTT 60
consensus_10063#1      ------------------------------------------------------------
consensus_10063#3      --------------------------------------------------------CCGC 4
consensus_10063#4      ------------------------------------------------------------
consensus_10063#2      ----------------------------------------------------------CC 2
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      TTAATCCACCTTGGACACAACCATCACCATACGTACTAGAGCAGATTA-AGATTGTAGCA 119
consensus_10063#1      ----------------CCGGTTTACACAATAT-TACCAAATCA-ATCG-ACA----GGCA 37
consensus_10063#3      GGACGCGTGGGTGGACACAACCATCACCATACGTACTAGAGCAGATTA-AGATTGTAGCA 63
consensus_10063#4      --------------------CCGCGGACGCGTGGGCTAGAGCAGATTA-AGATTGTAGCA 39
consensus_10063#2      GGGGTAATCACTCAAAACATGGCTCTCTATTCCAACCTAAGAACATTTTAGTTCGTCTCA 62
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      TACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTT 179
consensus_10063#1      TACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTT 97
consensus_10063#3      TACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTT 123
consensus_10063#4      TACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTT 99
consensus_10063#2      TACTTATTGGTGTTTAGGGTGGTTTAAGACCGGCAACTCAACATCATGGGTCACGGATTT 122
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      GGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGA 239
consensus_10063#1      GGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGA 157
consensus_10063#3      GGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGA 183
consensus_10063#4      GGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGA 159
consensus_10063#2      GGTGAACTTGCTAAGGTACGTGGAATTGTCACGCACAAGATTTCACCCTTTGAGCAACGA 182
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      GCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAG 299
consensus_10063#1      GCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAG 217
consensus_10063#3      GCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAG 243
consensus_10063#4      GCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAG 219
consensus_10063#2      GCCTTTGCGAATGTCATTAGCAAAGGTGTCCCGAACACTCTCCGTCGAATCCGTTCCCAG 242
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      GTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAAT 359
consensus_10063#1      GTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAAT 277
consensus_10063#3      GTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAAT 303
consensus_10063#4      GTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAAT 279
consensus_10063#2      GTTTTCATCGTGGCTCCTCCATTCGTCATGGGATACATGGTTTACAACTATATCGAAAAT 302
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      TTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAA 419
consensus_10063#1      TTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAA 337
consensus_10063#3      TTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAA 363
consensus_10063#4      TTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAA 339
consensus_10063#2      TTGCACACCCAGATGAATCGCAAGAATCCGGCAGAGTTTGAGAACGATTCTTAAGCTAAA 362
consensus_10063#5      ---------------------------CCGCCCACGCGTCCGA-CGATTCTTAAGCTAAA 32
                                                  *** *   *  *  ** ****************

consensus_10063#0      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 479
consensus_10063#1      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 397
consensus_10063#3      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 423
consensus_10063#4      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 399
consensus_10063#2      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 422
consensus_10063#5      TATCTAGGTGATGCTATAGCATATTTGGAAAATATGTCACATGAAGGCATGATAGCAACA 92
                       ************************************************************

consensus_10063#0      TAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAG 539
consensus_10063#1      TAATAAACATATTTCAAATGTGATCAGATTGTTAAAATGCGTTATGAGAAACCAGTTCAG 457
consensus_10063#3      TAATAAACATATTTCAAATGTGG------------------------------------- 446
consensus_10063#4      TAATAAACATATTTCAAATGTG-------------------------------------- 421
consensus_10063#2      TAATAAACATATTTCAAATGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATG 482
consensus_10063#5      TAATAAACATATTTCAAATGTG-------------------------------------- 114
                       **********************                                      

consensus_10063#0      TAAAATGGTGTAATAATAATATCGTGTAAAATTAGTAAACGCTTGCTTGCTTTTTTATTC 599
consensus_10063#1      TAAAATGGTGTAATAATAATATCGTGTAAAATTAGT------------------------ 493
consensus_10063#3      ------------------------------------------------------------
consensus_10063#4      ------------------------------------------------------------
consensus_10063#2      TGCCGG------------------------------------------------------ 488
consensus_10063#5      ------------------------------------------------------------
                                                                                   

consensus_10063#0      AGGAG 604
consensus_10063#1      -----
consensus_10063#3      -----
consensus_10063#4      -----
consensus_10063#2      -----
consensus_10063#5      -----