cluster # 10138

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Anopheles gambiae
cluster # 10138 cluster # 10138 Sequences # 28 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10138#0 length = 884 sequences # 16

consensus_10138#1 length = 598 sequences # 10
consensus_10138#2 length = 551 sequences # 2

consensusID : consensus_10138#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 884
fasta sequence

                              [TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTTGTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAAAACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTTAATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTGGTAGAAATTGTTAGGTAAAACTCATTTATTAGCACACCTTTAAATTTGTGTTTTTTT-AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGGCACTGAATTTTTTCCAGTTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC]

[-] EMBL BM633530             [TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTTGTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAAAACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTTAATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTGGTAGAAATTGTTAGGTAAAACTCATTTATTAG  CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCgg                                                                                                                                                                                                        ]
[-] EMBL BM598172             [                                                                                                                                                                                                                                                            AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCCGG                                                               ]
[-] EMBL BM609160             [                                                                                                                                                                                                                                                            AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCgg                                                                ]
[-] EMBL BM646556             [                                                                                                                                                                                                                                                            AGGTTAAACTCATTTATTAG  CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGTCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGGTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTCTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGT TTCgg                                                                ]
[-] EMBL BM577967             [                                                                                                                                                                                                                                                            AGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTcgg                                                                   ]
[-] EMBL BM614535             [                                                                                                                                                                                                                                                            AGGTAAAACTCATTTATTAG  CACCTTTAAA TTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGcgg                                                                                  ]
[+] EMBL CNS08ZIX             [                                                                                                                                                                                                                                                                      aaaTTATTAGCACACCTTTAAATTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM598383             [                                                                                                                                                                                                                                                                                            aTTGTGTTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGcgg                                                                         ]
[-] EMBL BM650732             [                                                                                                                                                                                                                                                                                                          AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGG                                                               ]
[-] EMBL BM601528             [                                                                                                                                                                                                                                                                                                          AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg                                                                  ]
[-] EMBL BM646654             [                                                                                                                                                                                                                                                                                                          AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg                                                                  ]
[-] EMBL BM579789             [                                                                                                                                                                                                                                                                                                          AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTcgg                                                                   ]
[-] EMBL BM629567             [                                                                                                                                                                                                                                                                                                          AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATcgg                                                                            ]
[+] EMBL CNS09FWH             [                                                                                                                                                                                                                                                                                                                      CTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTTCTTTACTTTACTTCTTTGTCTTTGTTCTCCATATCCGCTTCGCTATAACAAATACAGTCCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATTTGAATGGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGCAGTTTGCAGCTATTGGCGTAGGTTATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACAAACCCCGTTATAGTTCCTTCTGAAGGCAGTTGTACTGCCCGGTAGAACCAGCACGGCTACCAGTTCCACCAACAGCACATTTATGCAGCCCAGCACACGCATTCTGAGTTTTTATGAAAATTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTCCGATGCGAAAAGTGTTCTAACACTGAATTTTTTCCAGTTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC]
[-] EMBL BM641828             [                                                                                                                                                                                                                                                                                                                           TTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAcgg                                                                       ]
[-] EMBL BM586930             [                                                                                                                                                                                                                                                                                                                                             TCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGcgg                                                                  ]




>consensus_10138#0
TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTT
GTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAA
AACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTT
AATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTG
GTAGAAATTGTTAGGTAAAACTCATTTATTAGCACACCTTTAAATTTGTGTTTTTTTAAC
AAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACT
TTACTTCTTTGTCTTTGTTCTTCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGG
TGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACA
CTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCA
CCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAAT
CTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAG
AACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCT
AAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCA
ATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGGCACTGAATTTTTTCCAGTT
CCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC

consensusID : consensus_10138#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 598
fasta sequence

                              [CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT-ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC-CGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL CNS09FWG             [CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTATTTTTTTAAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATGC CTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTGAGTTTTTATGACACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC t                          ]
[-] EMBL BM623812             [                                        TATTTTTTT AACAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG                        ]
[-] EMBL BM621991             [                                                                   TTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTTCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTT  CGGACGCGTGGGCGGACGCGTGGGCGG]
[-] EMBL BM656275             [                                                                   TTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG                        ]
[-] EMBL BM595704             [                                                                            TATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGG                        ]
[-] EMBL BM617021             [                                                                                TCACATCACATACAGTGGAAGCATTCCTTTACTTTACTTCTTTGTCTTGGTTCTTCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCTCGGACGCGTGGGCGG            ]
[+] EMBL CNS08WCY             [                                                                                                              ACTTTACTTCTTTTTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGC                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS08WCX             [                                                                                                                                                  TCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTT ATTTTGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTAACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTGAGTTTTTATGACACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATTCCTTTATCttt                                                    ]
[-] EMBL CNS08ZIW             [                                                                                                                                                         CACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGCACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCAC                                                                                                                                       ]
[-] EMBL BM609670             [                                                                                                                                                                  AGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAAAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGAAGCTCAGCACGCGCATTTTAAG TTTTATGTCACTTTCTTCCTGCACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTC CGGACGCGTGGGCGGACGCGTGGGCGG]




>consensus_10138#1
CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTTTATTTTTTTAAACAAATCAA
TACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTACTTTACTTC
TTTGTCTTTGTTCTCCATATCCGCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGT
TCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCG
TCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGT
ATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGA
CAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGTAGAACCAGC
ACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTT
TATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGGCAATGCCTT
GATCGGGGCGCGTTCGATGCGAAAAGTGTTCCGGACGCGTGGGCGGACGCGTGGGCGG

consensusID : consensus_10138#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 551
fasta sequence

                              [ATGTGGCCTTTTTTTTTTTTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG]

[-] EMBL CNS095YM             [ATGTGGCCTTTTTTTTTTTTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTGCACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG]
[+] EMBL CNS095YN             [                                                 GCACACCTTAAAATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCAT ATCCGCTTCGCTATCACAAATACAGTCCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTA GAACTGTCCACCTTGCACCGCAGTTTGCAGCTGTTGGCGTAG                                                                                                                                                                                                               ]




>consensus_10138#2
ATGTGGCCTTTTTTTTTTTTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAA
AATTGTTATTTTTTTAACAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAG
TTGAAGCATTCCTTTACTTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCA
CAAATACAGTTCCTTATGGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAA
TCGGTGCCTTGCGCTCACACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGT
AGGAACTGTCCACCTTGCACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTC
CACAAATAGGCCGGTAAATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGG
CAGAGGTGCTGCCCGGTAGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGC
AGCTCAGCACACGCATTCTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTA
ATTGTTTCCAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10138#0      TAGTTTTGTAAATCCCAGCAGTAAAGTATGGTTATTTTTGTTGTTGAAAAGGGTTGTCTT 60
consensus_10138#2      ------------------------------------------------------------
consensus_10138#1      ------------------------------------------------------------
                                                                                   

consensus_10138#0      GTTTACAGCTACCAAGCGGCCTGTTGATAGCATTGATAAAGCGTATGGCTCATGCACCAA 120
consensus_10138#2      ------------------------------------------------------------
consensus_10138#1      ------------------------------------------------------------
                                                                                   

consensus_10138#0      AACACTTCAGCTAGTGGTGTAAATCCAATGAATCACGTTTAAAAAACACACTTAAACCTT 180
consensus_10138#2      ------------------------------------------------------------
consensus_10138#1      ------------------------------------------------------------
                                                                                   

consensus_10138#0      AATCGTGTCTGTTGCTAGTGTTTGTAACTATTGTAACATAAATTGGCTGATAAGAAACTG 240
consensus_10138#2      ----------------------------------------ATGTGGCCTTTTTTT--TTT 18
consensus_10138#1      ------------------------------------------------------------
                                                                                   

consensus_10138#0      GTAGAAATTGTTAGGTAAAACTCATTTATTAGCACACCTTTAAATTTGTGTTTTTTTAA- 299
consensus_10138#2      TTTTTTTTTGTTAGGTAAATCTCATTTATTAGCACACCTTAAAATTGTTATTTTTTTAA- 77
consensus_10138#1      ----CCCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTT----TTTTTATTTTTTTAAA 52
                                    ** * *  *    * **        **    **  * ********* 

consensus_10138#0      CAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTAC 359
consensus_10138#2      CAAATCAATACTTTATTGTCGATTTATTTCACATCACATACAGTTGAAGCATTCCTTTAC 137
consensus_10138#1      CAAATCAATACTTTATTGTCGATTTATTTCACATCACATGCAGTTGAAGCATTCCTTTAC 112
                       *************************************** ********************

consensus_10138#0      TTTACTTCTTTGTCTTTGTTCTTCATATCCGC-TTCGCTATCACAAATACAGTTCCTTAT 418
consensus_10138#2      TTTACTTCTTTGTCTTTGTTCTCCATAATCGCCTTCGCTATCACAAATACAGTTCCTTAT 197
consensus_10138#1      TTTACTTCTTTGTCTTTGTTCTCCATATCCGC-TTCGCTATCACAAATACAGTTCCTTAT 171
                       ********************** ****  *** ***************************

consensus_10138#0      GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 478
consensus_10138#2      GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 257
consensus_10138#1      GGTGTTCGTTCGCCTTAATCCAGGATCTCCTCGGGAATCTGAATCGGTGCCTTGCGCTCA 231
                       ************************************************************

consensus_10138#0      CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 538
consensus_10138#2      CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 317
consensus_10138#1      CACTCTCCGTCGCGAAGTATCCGCAGCTGAACCGATTTGCCGTAGGAACTGTCCACCTTG 291
                       ************************************************************

consensus_10138#0      CACCGCAGAATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 598
consensus_10138#2      CACCGCAGTATGCAGCTGTTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 377
consensus_10138#1      CACCGCAGTATGCAGCTATTGGCGTAGGTGATCAGATCACTTCCACAAATAGGCCGGTAA 351
                       ******** ******** ******************************************

consensus_10138#0      ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGT 658
consensus_10138#2      ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGAGGTGCTGCCCGGT 437
consensus_10138#1      ATCTTGGGACAGGCACACACCCCGTTATAGTTCCTTCTGAAGGCAGTGGTACTGCCCGGT 411
                       ********************************************** *** *********

consensus_10138#0      AGAACCAGCACGGCCACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 718
consensus_10138#2      AGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 497
consensus_10138#1      AGAACCAGCACGGCTACCAGTGCCACCAACAGCACAGTGATGCAGCTCAGCACACGCATT 471
                       ************** *********************************************

consensus_10138#0      CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGG 778
consensus_10138#2      CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTAATTGTTTCCAG------ 551
consensus_10138#1      CTAAGTTTTTATGTCACTTTCTTCCTGGACTTCTCAAAACTTGGTTTGGTTTATTCTTGG 531
                       ******************************************  **   *  *       

consensus_10138#0      CAATGCCTTGATCGGGGCGCGTTCGATGCGAAATGTGTTCCGGCACTGAATTTTTTCCAG 838
consensus_10138#2      ------------------------------------------------------------
consensus_10138#1      CAATGCCTTGATCGGGGCGCGTTCGATGCGAAAAGTGTTCCGGACGCGTGGGCGGACGCG 591
                                                                                   

consensus_10138#0      TTCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAGCCTTAAGACC 884
consensus_10138#2      ----------------------------------------------
consensus_10138#1      TGGGCGG--------------------------------------- 598