These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1042#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 214 fasta sequence [AAAAAAAGGGTAATAAAAACCCCCCCAAAAAAATCCCATTTCTCTTCAAAGATGGTAATGAGAAAGGGTTTAAGGATGTTTTTGTAAACCTTTTTTTTTATGTTTTTTTCCCCCGGGGTTTGGTTGGTTTGTTTTAGGGAGAGAGAATATTGTTTTTTTTCGGGGTAGATAAAATTAAGGGGGAGATAAAAAGAAAGAAAAAAATCCAAAAAAA] [+] EMBL CNS09ASB [AAAAAAAGGGTAATAAAAACCCCCCCAAAAAAATCCCATTTCTCTTCAAAGATGGTAATGAGAAAGGGTTTAAGGATGTTTTTGTAAACCTTTTTTTTTATGTTTTTTTCCCCCGGGGTTTGGTTGGTTTGTTTTAGGGAGAGAGAATATTGTTTTTTTTCGGGGTAGATAAAATTAAGGGGGAGATAAAAAGAAAGAAAAAAATCCAAAAAAA] consensusID : consensus_1042#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 115 fasta sequence [TGTTTTTTTTTGGGGGGTTTGGTTGGTTTGTTTTAGGGAGAGAGATTATTGTTTTTTTTGGGGGTAGATAAAATTAAGGGGGAGATAAAAAGAAGGAAAAAAATTAAAAAAAAAA] [+] EMBL CNS08N6X [TGTTTTTTTTTGGGGGGTTTGGTTGGTTTGTTTTAGGGAGAGAGATTATTGTTTTTTTTGGGGGTAGATAAAATTAAGGGGGAGATAAAAAGAAGGAAAAAAATTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1042#0 AAAAAAAGGGTAATAAAAACCCCCCCAAAAAAATCCCATTTCTCTTCAAAGATGGTAATG 60 consensus_1042#1 ------------------------------------------------------------ consensus_1042#0 AGAAAGGGTTTAAGGATGTTTTTGTAAACCTTTTTTTTTATGTTTTTTTCCCCCGGGGTT 120 consensus_1042#1 ----------------------------------------TGTTTTTTTTTGG-GGGGTT 19 ********* ****** consensus_1042#0 TGGTTGGTTTGTTTTAGGGAGAGAGAATATTGTTTTTTTTCGGGGTAGATAAAATTAAGG 180 consensus_1042#1 TGGTTGGTTTGTTTTAGGGAGAGAGATTATTGTTTTTTTTGGGGGTAGATAAAATTAAGG 79 ************************** ************* ******************* consensus_1042#0 GGGAGATAAAAAGAAAGAAAAAAATCCAAAAAAA-- 214 consensus_1042#1 GGGAGATAAAAAGAAGGAAAAAAATTAAAAAAAAAA 115 *************** ********* ******* |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||