Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 10430 cluster # 10430       Sequences # 40       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10430#0 length = 1316 sequences # 3  
consensus_10430#1 length = 652 sequences # 8  
consensus_10430#2 length = 629 sequences # 23  
consensus_10430#3 length = 586 sequences # 4  
consensus_10430#4 length = 342 sequences # 1  
consensus_10430#5 length = 129 sequences # 1  

consensusID : consensus_10430#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1316
fasta sequence
                              [GTCCGAATTGTATTCCGAATCGTTCGAAAACTAGGCAATTGCGTTTGTTTTGTTTTTATGCATTTCATTCCTGGATGAAACGACAGTGTTTTTTTTTTGTACCAACAGAGACACATTTTCATGTTTGAAAATGCATATTTTTTTTCTTCAAAAAACAAAACAAACACAACACAAAATACTAATACATGGAGCATGCGATGCCGACTGCGGAGGGGGTTAAAAATTGGTGCAAAATTTGAGGATGTTTAAAATATGAATAATATTTTGCCAAAACAAGCAGATATAACACCAAAGCAGGTGTTGGGAGGGGGTTCGAAAGACAGATAAGAGTCGAAAAAGATAAAAAAAAAACATGAGCTTCACAAACACACTTACTCATCATCCAATCTTCCATATCTCATTTTGGCCCTTAAAATTAGTTTGTATCGCGCGCGCAACGTGTGTTGCACCACCGTGCGTGTTCGCCTTCCTCTCTCTTTTTTTGTTCTCTTTTCTCGTGCTTCCTCTTCCCTTCTCGTTACGCTACGATTATTTTGCTTCCTCGCTCTCTCTCTCTCCTTCTTCTTCTATTTTCACTTTCATTTGTAATTTTTGTGTATTCGATAGTAGTACGTTAATGCTACGCTTTTCTTGTTCTCCCCGCGTTTCCTTAATTTGTATCATGAATGAATGAAAATGCGCAATCACACTTCTCTTTCCTTCTCTCCCGCTTACATCCTCCACCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCACAAGAGATAAACGCAAAACTGTAAGTTTGCTATCATATTATAAACGAACCTCTCTCTCTCTCTCTCCCCACCAATTCATCAATGCTTCGCCTCCACTCTGTCACCGGCCGCGCTCTTACGAGCATTAGTTCGTTCGCTTAATTTGTTTGTTTTGTAAAAAATTTGAAAATCCTAAAACCATGCACCCAACACACTTCTGCACCCCTGGTTCCTCTCGCTTTTTTTCCCCACTTGCTCTCCCTCTTTCTACCCATATGTGTTGCTCGTATGAGTGTGTGTGTGTGTGTGTAATTTTATTTGTATGTGAGAACTGAATGTCCACACGCTAATGCGAAAAATGTCAAAAAAAAAAAACGGGGCGAGAATAATTATGTTGCAAAAATTTAGACACAAAAACAAAGAACAAACTTATGCATTTGATTTTGTTTTGTTTTGTTTTTTGTACATGCCTACAATATATATTTAAAAAAAAATTAACAAACTTGCTTTTCTCCTCTCACGCGCTGCCCTAAAACCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]

[-] EMBL BX613066             [GTCCGAATTGTATTCCGAATCGTTCGAAAACTAGGCAATTGCGTTTGTTTTGTTTTTATGCATTTCATTCCTGGATGAAACGACAGTGTTTTTTTTTTGTACCAACAGAGACACATTTTCATGTTTGAAAATGCATATTTTTTTTCTTCAAAAAACAAAACAAACACAACACAAAATACTAATACATGGAGCATGCGATGCCGACTGCGGAGGGGGTTAAAAATTGGTGCAAAATTTGAGGATGTTTAAAATATGAATAATATTTTGCCAAAACAAGCAGATATAACACCAAAGCAGGTGTTGGGAGGGGGTTCGAAAGACAGATAAGAGTCGAAAAAGATAAAAAAAAAACATGAGCTTCACAAACACACTTACTCATCATCCAATCTTCCATATCTCATTTTGGCCCTTAAAATTAGTTTGTATCGCGCGCGCAACGTGTGTTGCACCACCGTGCGTGTTCGCCTTCCTCTCTCTTTTTTTGTTCTCTTTTCTCGTGCTTCCTCTTCCCTTCTCGTTACGCTACGATTATTTTGCTTCCTCGCTCTCTCTCTCTCCTTCTTCTTCTATTTTCACTTTCATTTGTAATTTTTGTGTATTCGATAGTAGTACGTTAATGCTACGCTTTTCTTGTTCTCCCCGCGTTTCCTTAATTTGTATCATGAATGAATGAAAATGCGCAATCACACTTCTCTTTCCTTCTCTCCCGCTTACATCCTCCACCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCAAAAGAGATCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM651833             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgCTCTCTCCTTC TCTTCTATTTTCACTTTCATTTGTAATTTTTGTGTATTCGATAGTAGTACGTTAATGCTACGCTTTTCTTGTTCTCCCCGCGTTTCCTTAATTTGTATCATGAATGAATGAAAATGCGCAATCACACTTCTCT   CTT TCTCCCGCTTACATCCTCCACCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCACAAGAGATAAACGCAAAACTGTAAGTTTGCTATCATATTATAAACGAACCTCTCTCTCTCTCTCTCCCCACCAATTCATCAATGCTTCGCCTCCACTCTGTCACCGGCCGCGCTCTTACGAGCATTAGTTCGTTCGCTTAATTTGTTTGTTTTGTAAAAAATTTGAAAATCCTAAAACCATGCACCCAACACACTTCTGCACCCCTGGTTCCTCT                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BM581961             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCACAAGAGATAAACGCAAAACTGTAAGTTTGCTATCATATTATAAACGAACCTCTCTCTCTCTCTCTCCCCACCAATTCATCAATGCTTCGCCTCCACTCTGTCACCGGCCGCGCTCTTACGAGCATTAGTTCGTTCGCTTAATTTGTTTGTTTTGTAAAAAATTTGAAAATCCTAAAACCATGCACCCAACACACTTCTGCACCCCTGGTTCCTCTCGCTTTTTTTCCCCACTTGCTCTCCCTCTTTCTACCCATATGTGTTGCTCGTATGAGTGTGTGTGTGTGTGTGTAATTTTATTTGTATGTGAGAACTGAATGTCCACACGCTAATGCGAAAAATGTCAAAAAAAAAAAACGGGGCGAGAATAATTATGTTGCAAAAATTTAGACACAAAAACAAAGAACAAACTTATGCATTTGATTTTGTTTTGTTTTGTTTTTTGTACATGCCTACAATATATATTTAAAAAAAAATTAACAAACTTGCTTTTCTCCTCTCACGCGCTGCCCTAAAACCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG]


>consensus_10430#0 GTCCGAATTGTATTCCGAATCGTTCGAAAACTAGGCAATTGCGTTTGTTTTGTTTTTATG CATTTCATTCCTGGATGAAACGACAGTGTTTTTTTTTTGTACCAACAGAGACACATTTTC ATGTTTGAAAATGCATATTTTTTTTCTTCAAAAAACAAAACAAACACAACACAAAATACT AATACATGGAGCATGCGATGCCGACTGCGGAGGGGGTTAAAAATTGGTGCAAAATTTGAG GATGTTTAAAATATGAATAATATTTTGCCAAAACAAGCAGATATAACACCAAAGCAGGTG TTGGGAGGGGGTTCGAAAGACAGATAAGAGTCGAAAAAGATAAAAAAAAAACATGAGCTT CACAAACACACTTACTCATCATCCAATCTTCCATATCTCATTTTGGCCCTTAAAATTAGT TTGTATCGCGCGCGCAACGTGTGTTGCACCACCGTGCGTGTTCGCCTTCCTCTCTCTTTT TTTGTTCTCTTTTCTCGTGCTTCCTCTTCCCTTCTCGTTACGCTACGATTATTTTGCTTC CTCGCTCTCTCTCTCTCCTTCTTCTTCTATTTTCACTTTCATTTGTAATTTTTGTGTATT CGATAGTAGTACGTTAATGCTACGCTTTTCTTGTTCTCCCCGCGTTTCCTTAATTTGTAT CATGAATGAATGAAAATGCGCAATCACACTTCTCTTTCCTTCTCTCCCGCTTACATCCTC CACCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCACAAGAGATAAACGCAAAA CTGTAAGTTTGCTATCATATTATAAACGAACCTCTCTCTCTCTCTCTCCCCACCAATTCA TCAATGCTTCGCCTCCACTCTGTCACCGGCCGCGCTCTTACGAGCATTAGTTCGTTCGCT TAATTTGTTTGTTTTGTAAAAAATTTGAAAATCCTAAAACCATGCACCCAACACACTTCT GCACCCCTGGTTCCTCTCGCTTTTTTTCCCCACTTGCTCTCCCTCTTTCTACCCATATGT GTTGCTCGTATGAGTGTGTGTGTGTGTGTGTAATTTTATTTGTATGTGAGAACTGAATGT CCACACGCTAATGCGAAAAATGTCAAAAAAAAAAAACGGGGCGAGAATAATTATGTTGCA AAAATTTAGACACAAAAACAAAGAACAAACTTATGCATTTGATTTTGTTTTGTTTTGTTT TTTGTACATGCCTACAATATATATTTAAAAAAAAATTAACAAACTTGCTTTTCTCCTCTC ACGCGCTGCCCTAAAACCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG



consensusID : consensus_10430#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 652
fasta sequence
                              [CCGGCAGCAGCAGCAACACAAGCAGCCACAACATCCTGGCAGCAGCAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT-ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA--AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGG]

[+] EMBL BM645532             [CCGGCAGCAGCAGCAACACAAGCAGCCACAACATCCTGGCAGCAGCAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                       ]
[+] EMBL BX609133             [       CAGCAGCAACACAAGCAGCCACAACATCCTGGCAGCAGCAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGC                                                                                                                                   ]
[+] EMBL CF542130             [                   AAGCAGCCACAACATCCTGGCAGCAGCAGCAGCAGTGTGTCCTCCTCCACCACCTACACCTCCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGA TTTTACAAACACAGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGTGCATGTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGANNAAAAAAAATAAAAGGAAACCATAAGAATATCC   AAAAAAAAAAAAAAAAAttaa                                  ]
[+] EMBL BM602383             [                                                                                                                                                                                 ccgCTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAATATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAGAAAcattcg                                       ]
[+] EMBL CNS08V4A             [                                                                                                                                                                                                                                      agttAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGG]
[-] EMBL AGA284946            [                                                                                                                                                                                                                                                                                                                                                      tttttTTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAGGAAAAAAAAAAAAAAAAAAAtggt                         ]
[+] EMBL AGA283658            [                                                                                                                                                                                                                                                                                                                                                         ttTTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGANAAAAGAAAAAAAAA                                       ]
[+] EMBL CNS08UOL             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGA  AAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAG AAAAAAAAAAAAAAAAAAAAAAAGGCCACATG               ]


>consensus_10430#1 CCGGCAGCAGCAGCAACACAAGCAGCCACAACATCCTGGCAGCAGCAGCAGCAGTGTGTC CTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCA TTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTA CTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGA TTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATATGCGGGAAGGAAT TATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAA TACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCT GCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACAC AGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGA GGGAAAGGAGTAGAGGATGCGAAAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAA AAAGAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTGGGGG



consensusID : consensus_10430#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 23
consensus length = 629
fasta sequence
                              [CCGAGTTGACGAACAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTACCGAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT-ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC------AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG-AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAAAAAAAAAAAAAAAAAGGGCGCCGCTCGCGACCCACGCGTCCGCCCACGCGTCCGCGG]

[+] EMBL BM606653             [CCGAGTTGACGAACAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM611793             [                                                                                                                                                            CCGAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM586293             [                                                                                                                                                            CCGAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACGCAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG   AAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM581082             [                                                                                                                                                              ccgTTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTACAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCG AAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAAT  AAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAAAGAGAGAGAAATGCTTC   TCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM645331             [                                                                                                                                                                 ccgATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM577540             [                                                                                                                                                                  ccgTATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTACAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCG AAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAAAGAGAGAGAAATGCTTC   TCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM608222             [                                                                                                                                                                    ccgTCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM642720             [                                                                                                                                                                     ccgCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM626655             [                                                                                                                                                                      ccgGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAA                                                                                       ]
[+] EMBL BM613258             [                                                                                                                                                                                 ccgAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM598224             [                                                                                                                                                                                       ccgCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCA                                                                              ]
[+] EMBL BM593798             [                                                                                                                                                                                                ccgAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM644806             [                                                                                                                                                                                                        ccgGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAA                                                                                       ]
[+] EMBL BM589432             [                                                                                                                                                                                                          ccgGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM579123             [                                                                                                                                                                                                            ccGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACGCAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG   AAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM577176             [                                                                                                                                                                                                               ccgGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[-] EMBL BM585354             [                                                                                                                                                                                                                       GTAGAAGAAGAAACGGCTCGGAATTTTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCCCCCCACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACCC      AGAGAGAAATGCTTCTCCTCTGCTGCGGCTTTTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAATATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAAAAAAAAAAAAAAAAAGGGCGCCGCTCGCGACCCACGCGTCCGCCCACGCGTCCGCGG]
[+] EMBL BM581374             [                                                                                                                                                                                                                            ccgAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL CF541604             [                                                                                                                                                                                                                                                                              ATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACAC      AGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCATACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAAATAAAAGGAAACCATAAAAATATCCTCGAAAAAAAAAA                                                      ]
[+] EMBL CF541918             [                                                                                                                                                                                                                                                                                                                                                                                                 CTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAACACAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAAATAAAAGGAAACCATAAGAATATC                                                                    ]
[+] EMBL BM593894             [                                                                                                                                                                                                                                                                                                                                                                                                                     ccGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM589115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgCACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]
[+] EMBL BM590704             [                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccgCAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG AAAAAAAAATAAAAGGAAACCATAAGAATATCCTTG                                                                ]


>consensus_10430#2 CCGAGTTGACGAACAGCAGCAGTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGAT GGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAA ACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTACCGAATTAATATCGTAAAACTATT AATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATT CTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGT AGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTA CAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAG AGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATG TGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAATA AAAGGAAACCATAAGAATATCCTTGAAAAAAAAAAAAAAAAAAAAAAGGGCGCCGCTCGC GACCCACGCGTCCGCCCACGCGTCCGCGG



consensusID : consensus_10430#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 586
fasta sequence
                              [CCGGTGTTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTTGCTGCTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT-ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAA]

[+] EMBL BM576181             [CCGGTGTTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTTGCTGCTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAA]
[+] EMBL BM624778             [                                                                                                                ccGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG       ]
[+] EMBL BM584604             [                                                                                                                                  ccgCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCAT ATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAA    ]
[+] EMBL BM647295             [                                                                                                                                                                                                                     ccgATCGTAAAACTATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCCTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAATCCACACAGCAGAGAAGTATCAGAAAATATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCG       ]


>consensus_10430#3 CCGGTGTTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTTGCTGCTGCTGCTGCCAGGAT GTTGTGGCTGCTTGTGTCCTCCTCCACCACCTACACTACCTACGTCCGATGGCTGATCGA CATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAAGAAAACGGGCTCTT TAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAACTATTAATTATCTCT ATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGA GCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTT GCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGA GAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACA CACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCG CATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAA



consensusID : consensus_10430#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 342
fasta sequence
                              [CCGCGGACGCGTGGGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAA]

[+] EMBL BM598517             [CCGCGGACGCGTGGGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATTTTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAA]


>consensus_10430#4 CCGCGGACGCGTGGGCGGAGTAGAAGAAGAAACGGCTCGGAATTCTAACATGGAGCATAT GCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACCGGGTAGAATTTTTTGCTATT TTTTCAGACGAATACAAGAAGACTAATAATGGATAGGATTTTTACAAACACAGAGAGAAA TGCTTCTCTTCTGCTGCGGCTTCTGCTCGATTATTTGCGAGCAGAGGATACACACACAAC AACAACCCACACAGCAGAGAAGTATCAGAAAACATAGAAACATGTGAAAATGCGCATTTT TGAGAGGAGTGAGGGAAAGGAGTAGAGGATGCGAAAAAAAAA



consensusID : consensus_10430#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 129
fasta sequence
                              [CCGAACGGACGCGTGGGCGGATGCTCTTCTCTCGAATCGCGTGTCGGTATCCTTTTATCGTGTACATTTGACGAGACTAGAGATTCCATTCGTTTTTTGTTTGTATAATTTAATAATGTGCTAATCGAT]

[+] EMBL BM614702             [CCGAACGGACGCGTGGGCGGATGCTCTTCTCTCGAATCGCGTGTCGGTATCCTTTTATCGTGTACATTTGACGAGACTAGAGATTCCATTCGTTTTTTGTTTGTATAATTTAATAATGTGCTAATCGAT]


>consensus_10430#5 CCGAACGGACGCGTGGGCGGATGCTCTTCTCTCGAATCGCGTGTCGGTATCCTTTTATCG TGTACATTTGACGAGACTAGAGATTCCATTCGTTTTTTGTTTGTATAATTTAATAATGTG CTAATCGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      GTCCGAATTGTATTCCGAATCGTTCGAAAACTAGGCAATTGCGTTTGTTTTGTTTTTATG 60
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CATTTCATTCCTGGATGAAACGACAGTGTTTTTTTTTTGTACCAACAGAGACACATTTTC 120
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      ATGTTTGAAAATGCATATTTTTTTTCTTCAAAAAACAAAACAAACACAACACAAAATACT 180
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      AATACATGGAGCATGCGATGCCGACTGCGGAGGGGGTTAAAAATTGGTGCAAAATTTGAG 240
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      GATGTTTAAAATATGAATAATATTTTGCCAAAACAAGCAGATATAACACCAAAGCAGGTG 300
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TTGGGAGGGGGTTCGAAAGACAGATAAGAGTCGAAAAAGATAAAAAAAAAACATGAGCTT 360
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CACAAACACACTTACTCATCATCCAATCTTCCATATCTCATTTTGGCCCTTAAAATTAGT 420
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TTGTATCGCGCGCGCAACGTGTGTTGCACCACCGTGCGTGTTCGCCTTCCTCTCTCTTTT 480
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------CCGGCAGCAGCAGCAACACAAGCAGCCACA 30
consensus_10430#3      --------------CCGGTGTTGCTGCTGCCAGGATGTTGTGGCTGCTTGTGTTGCTGCT 46
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TTTGTTCTCTTTTCTCGTGCTTCCTCTTCCCTTCTCGTTACGCTACGATTATTTTGCTTC 540
                                                                                   

consensus_10430#2      CCGAGTTGACG--AACAGCAGCAG--TGTGTCCTCCTCCACCACCTACACTACCTACGTC 56
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ACATCCTGGCAGCAGCAGCAGCAG--TGTGTCCTCCTCCACCACCTACACTACCTACGTC 88
consensus_10430#3      GCTGCTGCCAGGATGTTGTGGCTGCTTGTGTCCTCCTCCACCACCTACACTACCTACGTC 106
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CTCGCTCTCTCTCTCTCCTTCTTCTTCTATTTTCACTTTCATTTGTAATTTTTGTGTATT 600
                                                                                   

consensus_10430#2      CGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAA 116
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      CGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAA 148
consensus_10430#3      CGATGGCTGATCGACATCAAAACCTACCACCATTTCCATCGGAAAACATTCAGACGAAAA 166
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CGATAGTAGTACGTTAATGCTACGCTTTTCTTGTTCTCCCCGCGTTTCCTTAATTTGTAT 660
                                                                                   

consensus_10430#2      GAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTACCGAATTAATATCGTAAAAC 176
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      GAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAAC 208
consensus_10430#3      GAAAACGGGCTCTTTAATTCATTCCTTTATTACTCTTTTATATAATTAATATCGTAAAAC 226
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CATGAATGAATGAAAATGCGCAATCACACTTCTCTTTCCTTCTCTCCCGCTTACATCCTC 720
                                                                                   

consensus_10430#2      TATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGG 236
consensus_10430#4      -----------------CCGCGGACGCGTGG---GCGGAGTAGAAGAAGAAACGGCTCGG 40
consensus_10430#1      TATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGG 268
consensus_10430#3      TATTAATTATCTCTATTTAAAGAGAGAGTGGATTGCGGAGTAGAAGAAGAAACGGCTCGG 286
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      CACCCTCTCTCCTCTCCTTCCACTTTTGTATTCCATCAATCACAAGAGATAAACGCAAAA 780
                                                                                   

consensus_10430#2      AATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACC 296
consensus_10430#4      AATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACC 100
consensus_10430#1      AATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACC 328
consensus_10430#3      AATTCTAACATGGAGCATATGCGGGAAGGAATTATAACCGAAAGCACCACACATCAGACC 346
consensus_10430#5      ---------------------CCGAACGGACGCGTGGGCGGATGCTCTTCTC-TCGAATC 38
consensus_10430#0      CTGTAAGTTTGCTATCATATTATAAACGAACCTCTCTCTCTCT-CTCTCCCCACCAATTC 839
                                                * * *    *         * *  * *  *    *

consensus_10430#2      GGGTAGAATTTTTTGCTATTTTTTCAG-----ACGAATACAAGAAGACTAATA-----AT 346
consensus_10430#4      GGGTAGAATTTTTTGCTATTTTTTCAG-----ACGAATACAAGAAGACTAATA-----AT 150
consensus_10430#1      GGGTAGAATTTTTTGCTATTTTTTCAG-----ACGAATACAAGAAGACTAATA-----AT 378
consensus_10430#3      GGGTAGAATTTTTTGCTATTTTTTCAG-----ACGAATACAAGAAGACTAATA-----AT 396
consensus_10430#5      GCGTG----TCGGTATCCTTTTATCGT-----GTACATTTGACGAGACTAGAG-----AT 84
consensus_10430#0      ATCAATGCTTCGCCTCCACTCTGTCACCGGCCGCGCTCTTACGAGCATTAGTTCGTTCGC 899
                                *         * * **                     * **          

consensus_10430#2      GG-ATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCG 405
consensus_10430#4      GG-ATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCG 209
consensus_10430#1      GG-ATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCG 437
consensus_10430#3      GG-ATAGGATTTTTACAAACACAGAGAGAAATGCTTCTCTTCTGCTGCGGCTTCTGCTCG 455
consensus_10430#5      TCCATTCGTTTTTTGTTTGTATAATTTAATAATGTGCTAATCGAT--------------- 129
consensus_10430#0      TTAATTTGTTTGTTTTGTAAAAAATTTGAAAATCCTAAAACCATGCACCCAACACACTTC 959
                          **  * ** **      * *     * *          *                  

consensus_10430#2      ATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGA 465
consensus_10430#4      ATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGA 269
consensus_10430#1      ATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGA 497
consensus_10430#3      ATTATTTGCGAGCAGAGGATACACACACAACAACAACCCACACAGCAGAGAAGTATCAGA 515
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TGCACCCCTGGTTCCTCTCGCTTTTTTTCCCCACTTGCTCTCCCTCTTTCTACCCATATG 1019
                                                                                   

consensus_10430#2      AAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGA 525
consensus_10430#4      AAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGA 329
consensus_10430#1      AAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGA 557
consensus_10430#3      AAACATAGAAACATGTGAAAATGCGCATTTTTGAGAGGAGTGAGGGAAAGGAGTAGAGGA 575
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TGTTGCTCGTATGAGTGTGTGTGTGTGTGTGTAATTTTATTTGTATGTGAGAACTGAATG 1079
                                                                                   

consensus_10430#2      TGCGAAAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAAAAAAAAAAAAAAA 585
consensus_10430#4      TGCGAAAAAAAAA----------------------------------------------- 342
consensus_10430#1      TGCGAAAAAAAAATAAAAGGAAACCATAAGAATATCCTTGAAAAAAGAAAAAAAAAAAAA 617
consensus_10430#3      TGCGAAAAAAA------------------------------------------------- 586
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TCCACACGCTAATGCGAAAAATGTCAAAAAAAAAAAACGGGGCGAGAATAATTATGTTGC 1139
                                                                                   

consensus_10430#2      AAGGGCGCCGCTCGCGACCCACGCGTCCGCCCACGCGTCCGCGG---------------- 629
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      AAAAAAAAAA---AGGCCACATGTGCTCGAGCTGGGGG---------------------- 652
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      AAAAATTTAGACACAAAAACAAAGAACAAACTTATGCATTTGATTTTGTTTTGTTTTGTT 1199
                                                                                   

consensus_10430#2      ------------------------------------------------------------
consensus_10430#4      ------------------------------------------------------------
consensus_10430#1      ------------------------------------------------------------
consensus_10430#3      ------------------------------------------------------------
consensus_10430#5      ------------------------------------------------------------
consensus_10430#0      TTTTGTACATGCCTACAATATATATTTAAAAAAAAATTAACAAACTTGCTTTTCTCCTCT 1259
                                                                                   

consensus_10430#2      ---------------------------------------------------------
consensus_10430#4      ---------------------------------------------------------
consensus_10430#1      ---------------------------------------------------------
consensus_10430#3      ---------------------------------------------------------
consensus_10430#5      ---------------------------------------------------------
consensus_10430#0      CACGCGCTGCCCTAAAACCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGG 1316
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)