These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1226#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 650 fasta sequence [GGCANGACCAACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGATCATTAACGTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAAGTTATAATTTAAAAACCAATAAGATTATAGTTTNCCNNCTTCTTTCTATAGCAATTATAAGCTGCTGAAGGATGTGTATATTTCAATTATATTTCTCTNGACAGCAAGCTAACATGTGTTTCTCTGTTCGCAACGCATTTNCTATGTTATNTATTTCTGCTCCTCTGCTTCTGTTACAGGGCTGCTATCTCTTTTTATTACAATCTTTCTTTCTTTCCTAATACTGATTTGACATTTGTAGCACCAACAATTGCAAATTGTATTTGACGCTGTATTAACTTTTCCGTTTTGCCTTACTTTATTTACAAATGTTTTATCGAAGCAACAAATCGTTACGAAAGCAATTTACGCGTAGCTGAAGCAGCTTGTTTCGTTGTANTCTATTCCTNGTTCTNGTTGAAGTAATCTATGATTTTATATGATTTGTTCACTTATCTGATCTGCGCAGCTNAATAAAGAAGGATAACTCCTTTCACCCCAAAACGGCACAAAAAACCACGTTAACCATGGGGAGAAACAAAACATACTGAAAGCAGTAAAAGGTCCCGT] [+] EMBL AL932660 [GGCANGACCAACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGATCATTAACGTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAAGTTATAATTTAAAAACCAATAAGATTATAGTTTNCCNNCTTCTTTCTATAGCAATTATAAGCTGCTGAAGGATGTGTATATTTCAATTATATTTCTCTNGACAGCAAGCTAACATGTGTTTCTCTGTTCGCAACGCATTTNCTATGTTATNTATTTCTGCTCCTCTGCTTCTGTTACAGGGCTGCTATCTCTTTTTATTACAATCTTTCTTTCTTTCCTAATACTGATTTGACATTTGTAGCACCAACAATTGCAAATTGTATTTGACGCTGTATTAACTTTTCCGTTTTGCCTTACTTTATTTACAAATGTTTTATCGAAGCAACAAATCGTTACGAAAGCAATTTACGCGTAGCTGAAGCAGCTTGTTTCGTTGTANTCTATTCCTNGTTCTNGTTGAAGTAATCTATGATTTTATATGATTTGTTCACTTATCTGATCTGCGCAGCTNAATAAAGAAGGATAACTCCTTTCACCCCAAAACGGCACAAAAAACCACGTTAACCATGGGGAGAAACAAAACATACTGAAAGCAGTAAAAGGTCCCGT] consensusID : consensus_1226#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 282 fasta sequence [GTGTAGAAATTGGAAATGTTTGTGCAATGTTTGGCTATGCAAAATTATTTAAAAAAATTAAGGGTAAACAGGACCCAACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGATCATTAAGTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAATTTGTAATTTATGAGCCAATAAGATTATAGTTTTTTTTTCTTTCTATAGAATTATAAGCTGATGAAGGATGTACTATATTTCAATTATAGGTTCATGACAGCAAGCTAAAAAAAA] [-] EMBL AGA284023 [GTGTAGAAATTGGAAATGTTTGTGCAATGTTTGGCTATGCAAAATTATTTAAAAAAATTAAGGGTAAACAGGACCCAACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGATCATTAAGTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAATTTGTAATTTATGAGCCAATAAGATTATAGTTTTTTTTTCTTTCTATAGAATTATAAGCTGATGAAGGATGTACTATATTTCAATTATAGGTTCATGACAGCAAGCTAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1226#0 ------------------------------------------------------------ consensus_1226#1 GTGTAGAAATTGGAAATGTTTGTGCAATGTTTGGCTATGCAAAATTATTTAAAAAAATTA 60 consensus_1226#0 ------GGCANGACC-AACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGAT 53 consensus_1226#1 AGGGTAAACAGGACCCAACACGGACGGCGTCACGGAAAGTGGTAGTGAAGAAAGGGTGAT 120 ** **** ******************************************** consensus_1226#0 CATTAACGTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAAGTTATAATTTAA 113 consensus_1226#1 CATTAA-GTGTAGTGCAGGGGAAACAGGCAGGATCTGATTTAAGGAAATTTGTAATTTAT 179 ****** ***************************************** ** ******* consensus_1226#0 AAACCAATAAGATTATAGTTTNCCNNCTTCTTTCTATAGCAATTATAAGCTGCTGAAGGA 173 consensus_1226#1 GAGCCAATAAGATTATAGTTTT--TTTTTCTTTCTATAG-AATTATAAGCTGATGAAGGA 236 * ****************** ************ ************ ******* consensus_1226#0 TGTG-TATATTTCAATTATATTTCTCTNGACAGCAAGCTAACATGTGTTTCTCTGTTCGC 232 consensus_1226#1 TGTACTATATTTCAATTATAGGT-TCATGACAGCAAGCTAAAAAAAA------------- 282 *** *************** * ** ************* * consensus_1226#0 AACGCATTTNCTATGTTATNTATTTCTGCTCCTCTGCTTCTGTTACAGGGCTGCTATCTC 292 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 TTTTTATTACAATCTTTCTTTCTTTCCTAATACTGATTTGACATTTGTAGCACCAACAAT 352 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 TGCAAATTGTATTTGACGCTGTATTAACTTTTCCGTTTTGCCTTACTTTATTTACAAATG 412 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 TTTTATCGAAGCAACAAATCGTTACGAAAGCAATTTACGCGTAGCTGAAGCAGCTTGTTT 472 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 CGTTGTANTCTATTCCTNGTTCTNGTTGAAGTAATCTATGATTTTATATGATTTGTTCAC 532 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 TTATCTGATCTGCGCAGCTNAATAAAGAAGGATAACTCCTTTCACCCCAAAACGGCACAA 592 consensus_1226#1 ------------------------------------------------------------ consensus_1226#0 AAAACCACGTTAACCATGGGGAGAAACAAAACATACTGAAAGCAGTAAAAGGTCCCGT 650 consensus_1226#1 ---------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||