These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1332#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence [CCGTCGATACAGTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAATAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGCGGAACGTGTGTGTCTGTGATAAGAGTTTGTGTAGAGATAAAAGAGATTCTACTGACCTTCCTGGAGATGATGGCTTGGAGGGGCGTACGCACTGTTGGCACGTGCACACCTCTTATCGAGGGTTTTAAACGCTTCCGGAGGAGGCTCTGCGATGAAATAGGGTAAAGGAACAAGAGGTAGAAATACAGCAACTAAAGGCGGAAATTGAATTGCTCCGCAAGCAAACCGGTATACGGCATCCGCTTGTAGCGCCGCAGCTACCTACCAAACCGGGCGGGCTCGTACCGTCCCGGCCATCGATCGCTGGCGCTGGACCGGGTGGCGTACCCACCGTCGGTGCAGCGGGAAGTCCATCCTCGCTGGGAGCGACTGTCACTTCAGGATCGATAGGTATACCAGGGCAAATGATTAGTAGCATGGCGACGAAAGTTGTCCAGCCGACCGCAACCGTATCGAAGCGTTCCGGTTACCGCACCAACAACCGGAATCGCTCGCTCGGTCTCACCG] [+] EMBL BM594472 [CCGTCGATACAGTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAATAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGCGGAACGTGTGTGTCTGTGATAAGAGTTTGTGTAGAGATAAAAGAGATTCTACTGACCTTCCTGGAGATGATGGCTTGGAGGGGCGTACGCACTGTTGGCACGTGCACACCTCTTATCGAGGGTTTTAAACGCTTCCGGAGGAGGCTCTGCGATGAAATAGGGTAAAGGAACAAGAGGTAGAAATACAGCAACTAAAGGCGGAAATTGAATTGCTCCGCAAGCAAACCGGTATACGGCATCCGCTTGTAGCGCCGCAGCTACCTACCAAACCGGGCGGGCTCGTACCGTCCCGGCCATCGATCGCTGGCGCTGGACCGGGTGGCGTACCCACCGTCGGTGCAGCGGGAAGTCCATCCTCGCTGGGAGCGACTGTCACTTCAGGATCGATAGGTATACCAGGGCAAATGATTAGTAGCATGGCGACGAAAGTTGTCCAGCCGACCGCAACCGTATCGAAGCGTTCCGGTTACCGCACCAACAACCGGAATCGCTCGCTCGGTCTCACCG] consensusID : consensus_1332#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 124 fasta sequence [CCGCGGACGCGTGGGGTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAATAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGCGGAA] [+] EMBL BM581786 [CCGCGGACGCGTGGGGTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAATAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGCGGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1332#0 CCGTCGATACA----GTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAA 56 consensus_1332#1 CCGCGGACGCGTGGGGTGCTGTTGTGCCGTGGTGGTTGTTCTTTCATCAATTTACTTAAA 60 *** ** * ********************************************* consensus_1332#0 TAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGC 116 consensus_1332#1 TAACTTTGCTGCATAGCTGGTGATAATGTTCAGTGCTCTGCATGCTTATCAGGAACACGC 120 ************************************************************ consensus_1332#0 GGAACGTGTGTGTCTGTGATAAGAGTTTGTGTAGAGATAAAAGAGATTCTACTGACCTTC 176 consensus_1332#1 GGAA-------------------------------------------------------- 124 **** consensus_1332#0 CTGGAGATGATGGCTTGGAGGGGCGTACGCACTGTTGGCACGTGCACACCTCTTATCGAG 236 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 GGTTTTAAACGCTTCCGGAGGAGGCTCTGCGATGAAATAGGGTAAAGGAACAAGAGGTAG 296 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 AAATACAGCAACTAAAGGCGGAAATTGAATTGCTCCGCAAGCAAACCGGTATACGGCATC 356 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 CGCTTGTAGCGCCGCAGCTACCTACCAAACCGGGCGGGCTCGTACCGTCCCGGCCATCGA 416 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 TCGCTGGCGCTGGACCGGGTGGCGTACCCACCGTCGGTGCAGCGGGAAGTCCATCCTCGC 476 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 TGGGAGCGACTGTCACTTCAGGATCGATAGGTATACCAGGGCAAATGATTAGTAGCATGG 536 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 CGACGAAAGTTGTCCAGCCGACCGCAACCGTATCGAAGCGTTCCGGTTACCGCACCAACA 596 consensus_1332#1 ------------------------------------------------------------ consensus_1332#0 ACCGGAATCGCTCGCTCGGTCTCACCG 623 consensus_1332#1 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||