These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence [CCCGAGGTTTGCTCCGGTTATTGTGAAACCTGTTTCACTGATTTGTGATGAAAAATCGAATGAGCAAAGCGTATTAATTCAACTCTCCTACCAGCTGTCGGTGGGAGAAGATCTACGCCCCGGCTACAAGACCGTTCTGTCGAATGTAATGCAAATCTTTTACAATCTTAGCAACATGAACATCGTAGTGTCGGACGACGAATGTTTGTTCAAGGTGCTCGCCCGGCAGATGAAAAAGAGGCTGTGTTCCTTGGCTGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTATTGAAGGAATGAAGGAATCTTCCATGGTGAAGGACGTATGCGAGTTCAATGCGTTCCTAAAAACGACCAACTTTGTAGATGGCGAAAATGACGATTTACTGAGGAATACGCCAATTCGATCGAAACAATTCACCAGAAAAAAGCTTTGCGACAATGTGCTGGACACGGCTGTACAAATAATGAAACATGAGAGCCATGAAATGGTGCTAATCGAAGATCACGAGTACCAGTTCGTCGGCCAGTACTTCGGCCCGCCTCTCA] [+] EMBL AL692870 [CCCGAGGTTTGCTCCGGTTATTGTGAAACCTGTTTCACTGATTTGTGATGAAAAATCGAATGAGCAAAGCGTATTAATTCAACTCTCCTACCAGCTGTCGGTGGGAGAAGATCTACGCCCCGGCTACAAGACCGTTCTGTCGAATGTAATGCAAATCTTTTACAATCTTAGCAACATGAACATCGTAGTGTCGGACGACGAATGTTTGTTCAAGGTGCTCGCCCGGCAGATGAAAAAGAGGCTGTGTTCCTTGGCTGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTATTGAAGGAATGAAGGAATCTTCCATGGTGAAGGACGTATGCGAGTTCAATGCGTTCCTAAAAACGACCAACTTTGTAGATGGCGAAAATGACGATTTACTGAGGAATACGCCAATTCGATCGAAACAATTCACCAGAAAAAAGCTTTGCGACAATGTGCTGGACACGGCTGTACAAATAATGAAACATGAGAGCCATGAAATGGTGCTAATCGAAGATCACGAGTACCAGTTCGTCGGCCAGTACTTCGGCCCGCCTCTCA] consensusID : consensus_1573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 220 fasta sequence [GCTCGCCCGGCAGAAGAAAAAGAGGCTGAGTACCTGGCCGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTACGGAAGGAATGAAGGAATCTGCCATGGCGAAGGACGAATGCGAGTGCAAGGCGTACCTAAAAACGACCAACTCGGTAGAGGGCGAAAATGACGACAAACTGAAGGAGCACGCCTCATCCGCAACCACTACGGAGGCTGAGAAG] [+] EMBL BX608407 [GCTCGCCCGGCAGAAGAAAAAGAGGCTGAGTACCTGGCCGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTACGGAAGGAATGAAGGAATCTGCCATGGCGAAGGACGAATGCGAGTGCAAGGCGTACCTAAAAACGACCAACTCGGTAGAGGGCGAAAATGACGACAAACTGAAGGAGCACGCCTCATCCGCAACCACTACGGAGGCTGAGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1573#0 CCCGAGGTTTGCTCCGGTTATTGTGAAACCTGTTTCACTGATTTGTGATGAAAAATCGAA 60 consensus_1573#1 ------------------------------------------------------------ consensus_1573#0 TGAGCAAAGCGTATTAATTCAACTCTCCTACCAGCTGTCGGTGGGAGAAGATCTACGCCC 120 consensus_1573#1 ------------------------------------------------------------ consensus_1573#0 CGGCTACAAGACCGTTCTGTCGAATGTAATGCAAATCTTTTACAATCTTAGCAACATGAA 180 consensus_1573#1 ------------------------------------------------------------ consensus_1573#0 CATCGTAGTGTCGGACGACGAATGTTTGTTCAAGGTGCTCGCCCGGCAGATGAAAAAGAG 240 consensus_1573#1 ------------------------------------GCTCGCCCGGCAGAAGAAAAAGAG 24 ************** ********* consensus_1573#0 GCTGTGTTCCTTGGCTGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTATTGAAG 300 consensus_1573#1 GCTGAGTACCT-GGCCGATGGAGCAATGTCTGGATCGCGACATCCCCGACACTACGGAAG 83 **** ** *** *** ************************************** **** consensus_1573#0 GAATGAAGGAATCTTCCATGGTGAAGGACGTATGCGAGTTCAATGCGTTCCTAAAAACGA 360 consensus_1573#1 GAATGAAGGAATCTGCCATGGCGAAGGACGAATGCGAGTGCAAGGCGTACCTAAAAACGA 143 ************** ****** ******** ******** *** **** *********** consensus_1573#0 CCAACTTTGTAGATGGCGAAAATGACGATTTACTGA-GGAATACGCCAATTCGATCGAAA 419 consensus_1573#1 CCAACTCGGTAGAGGGCGAAAATGACGACAAACTGAAGGAGCACGCC---TCATCCGCAA 200 ****** ***** ************** ***** *** ***** ** ** ** consensus_1573#0 CAATTCACCAGA--AAAAAGCTTTGCGACAATGTGCTGGACACGGCTGTACAAATAATGA 477 consensus_1573#1 CCACTACGGAGGCTGAGAAG---------------------------------------- 220 * * * ** * *** consensus_1573#0 AACATGAGAGCCATGAAATGGTGCTAATCGAAGATCACGAGTACCAGTTCGTCGGCCAGT 537 consensus_1573#1 ------------------------------------------------------------ consensus_1573#0 ACTTCGGCCCGCCTCTCA 555 consensus_1573#1 ------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||