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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1652#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 937 fasta sequence
[TTTGGGAGGGACGGTGGCCGTAGCCGTGGTTTTGATTACGTGGCTTTGTGGTGAGATCGCTCTGTTGTGAGATGAACGCGCGTTGTGAGTGTGTGGAGTCATCTTCAAAATGACAGCCGAACTGAATCGGTGTTAGCTCATGAAGTGGCTCTGCTTCTAGCCACTGGATTGCGTTGAGAACTTCCTGTGTGTTGTGAGTGTGTGTTTGTGTGTATTAATTGAAGCAGCTATATCCGGTTGACAAAGCGATTGGATCAAATTATGTGATAAAGTGTCAAATAGGTGAACTGTACGAAACGATTCGAGCTCAAAAATGAAGAAAGCAAACGGTCCGATAACCCAGCTGGTTATTATGATGCTCGAGGAGGACTTCACCTTCTGCGAGTGTAATTTTGCGGTGAAGCCAACGAGACGTCAGGATGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTCCGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAATGTCACGCTGGAGAAGCGCATCAGCGAACGGGAGGCGAAAGAAATCGAACGTGAGCGTAACCTGATCCTGTCCGGTGCGGGCGACACATACCGGAGGAGATGACCAGCTCGGTCTTTCTGGTGAACCAGAAAACGAACGTCAACATCCTGAACAAGCGGGAAAAGCTGAAAACGATCCGAGAGAAAAATGCGGAACGTTTGATCAAACAGGGCCACCGCTGGGAGCGGGAACGGCAGCAGATGGAGGAGCAGAGCCGCGAGCGCGAGATCGAACGGCGCACCAAGCGCGAGGCACTGCTCGAGCAGGAAAAGCTGTACATGATCGACGGCGGCATCGACGGGGGCGCTCGCAAGCAGCGACCGATGCAGCGACAGAACGAGGTGCACGAGTACCAGGAGT]
[+] EMBL CNS09L0J [TTTGGGAGGGACGGTGGCCGTAGCCGTGGTTTTGATTACGTGGCTTTGTGGTGAGATCGCTCTGTTGTGAGATGAACGCGCGTTGTGAGTGTGTGGAGTCATCTTCAAAATGACAGCCGAACTGAATCGGTGTTAGCTCATGAAGTGGCTCTGCTTCTAGCCACTGGATTGCGTTGAGAACTTCCTGTGTGTTGTGAGTGTGTGTTTGTGTGTATTAATTGAAGCAGCTATATCCGGTTGACAAAGCGATTGGATCAAATTATGTGATAAAGTGTCAAATAGGTGAACTGTACGAAACGATTCGAGCTCAAAAATGAAGAAAGCAAACGGTCCGATAACCCAGCTGGTTATTATGATGCTCGAGGAGGACTTCACCTTCTGCGAGTGTAATTTTGCGGTGAAGCCAACGAGACGTCAGGATGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTCCGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAATGTCACGCTGGAGAAGCGCATCAGCGAACGGGAGGCGAAAGAAATCGAACGTGAGCGTAACCTGATCCTGTCCGGTGCGGGCGACACATACCGGAGGAGATGACCAGCTCGGTCTTTCTGGTGAACCAGAAAACGAACGTCAACATCCTGAACAAGCGGGAAAAGCTGAAAACGATCCGAGAGAAAAATGCGGAACGTTTGATCAAACAGGGCCACCGCTGGGAGCGGGAACGGCAGCAGATGGAGGAGCAGAGCCGCGAGCGCGAGATCGAACGGCGCACCAAGCGCGAGGCACTGCTCGAGCAGGAAAAGCTGTACATGATCGACGGCGGCATCGACGGGGGCGCTCGCAAGCAGCGACCGATGCAGCGACAGAACGAGGTGCACGAGTACCAGGAGT]
consensusID : consensus_1652#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[CCGCGGACGCGTGGGTGGGTGTCATAAATGTCAAATTTTTGTTGTACCCAGGCTGGGAAGCAAGCGGTAGCCGCGGTATTTAGCGCGTAAAAGTAATTTGTGCAGTTGGTTCGTCGTCTGTTGCTGCTGGGCTGGAAATTACAGTGTGTTTACGGACCCGAGAAACATTGCACTACACTGCTTCGGTGTGCCCTTTGCCTTACAGTGTGTTTTAATAGAACAACAGCGAAACTGACAGTGAGCGTGATGGACGCTTCGAACATCGTTGGCGATGACATTGACACCAAGGATTGCTGGTGGGAACGGCCAAGTGTTATCTATGCTGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTCCGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAATGTCACGCTGGAGAAGCGCATCAGCGAACGGGAGCACCGAGAATGGCAACGGCAGAAGCAACTGATCCTGGACGGCAAGTATAGCCTGGAAAACTGTCCCCGGTCTTTAATTCCACTGCACAGTATCGTGCTGGCGAAAGAAATCGAACGTGAGCGTAACCTGATCCTGTCCGGTGCGGGCGACAGCATACCGGAGGAGATGACCAGCTCGGTCTTTCTGGTGAACCAGAAAACGAACGT]
[+] EMBL BM607228 [CCGCGGACGCGTGGGTGGGTGTCATAAATGTCAAATTTTTGTTGTACCCAGGCTGGGAAGCAAGCGGTAGCCGCGGTATTTAGCGCGTAAAAGTAATTTGTGCAGTTGGTTCGTCGTCTGTTGCTGCTGGGCTGGAAATTACAGTGTGTTTACGGACCCGAGAAACATTGCACTACACTGCTTCGGTGTGCCCTTTGCCTTACAGTGTGTTTTAATAGAACAACAGCGAAACTGACAGTGAGCGTGATGGACGCTTCGAACATCGTTGGCGATGACATTGACACCAAGGATTGCTGGTGGGAACGGCCAAGTGTTATCTATGCTGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTCCGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAATGTCACGCTGGAGAAGCGCATCAGCGAACGGGAGCACCGAGAATGGCAACGGCAGAAGCAACTGATCCTGGACGGCAAGTATAGCCTGGAAAACTGTCCCCGGTCTTTAATTCCACTGCACAGTATCGTGCTGGCGAAAGAAATCGAACGTGAGCGTAACCTGATCCTGTCCGGTGCGGGCGACAGCATACCGGAGGAGATGACCAGCTCGGTCTTTCTGGTGAACCAGAAAACGAACGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1652#0 TTTGGGAGGGACGGTGGCCGTAGCCGTGGTTTTGATTACGTGGCTTTGTGGTGAGATCGC 60
consensus_1652#1 ------------------------------------------------------------
consensus_1652#0 TCTGTTGTGAGATGAACGCGCGTTGTGAGTGTGTGGAGTCATCTTCAAAATGACAGCCGA 120
consensus_1652#1 ----------------------CCGCGGACGCGTGGGTGGGTGTCATAAATG----TCAA 34
* * * **** * * ***** * *
consensus_1652#0 ACTGAATCGGTGTTAGCTCATGAAGTGGCTCTGCTTCTAGCCACTGGATTGCGT-TGAGA 179
consensus_1652#1 ATTT--TTGTTGT--ACCCAGGCTGGGAAGCAAGCGGTAGCCGCGGTATTTAGCGCGTAA 90
* * * * *** * ** * * * * ***** * * *** * * *
consensus_1652#0 ACTTCCTGTGTGTTGTGAGTGTGT-GTTTGTGTGTATTAATTGAAGCAGCTATATCCGGT 238
consensus_1652#1 AAGTAATTTGTGCAGTTGGTTCGTCGTCTGTTGCTGCTGGGCTGGA-AATTACAGTGTGT 149
* * * **** ** ** ** ** *** * * * ** * **
consensus_1652#0 TGACAAAGCGATTGGATCAAATTATGTGATAAAGTGTCAAATAGGTGAACTGTACGAAAC 298
consensus_1652#1 TTACGGACC---CGAGAAACATTGCACTACACTGCTTCG---GTGTGCCCTTTGCCTTAC 203
* ** * * * * *** * * * ** *** ** * * **
consensus_1652#0 GATTCGAGCTCAAAAATGAAGAAAGCAAACGGTCCGATAACCCAGCTGGTTATTATGATG 358
consensus_1652#1 AGT--GTGTTTTAATAGAACAACAGCGAAACTGACAGTGAGCGTGATGGACGCTTCGAAC 261
* * * * ** * * * *** ** * * * * * *** * **
consensus_1652#0 CTCGAGGAGGACTTCACCTTCTGCGAGTGTAATTTTGCGGTGAAGCCAACGAGACGTCAG 418
consensus_1652#1 ATCGTTGGCGATGACATTGACACCAAGGATTGCTGGTGGGAACGGCCAAGTGTTATCTAT 321
*** * ** ** * * ** * * ** ***** *
consensus_1652#0 GATGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTC 478
consensus_1652#1 GCTGTGAACCTGCCGAGAGTAACCGCACAACTGGAGAAGTTGATGGGAACAAATGTGGTC 381
* **********************************************************
consensus_1652#0 CGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAAT 538
consensus_1652#1 CGGCTGACGGATCGCAAATACATGCAGGAGCTGCAGCGCCGCATCCAGGAGGACTACAAT 441
************************************************************
consensus_1652#0 GTCACGCTGGAGAAGCGCATCAGCGAACGGGAGGCGAAAGAAATCGAACGTGAGCGTAAC 598
consensus_1652#1 GTCACGCTGGAGAAGCGCATCAGCGAACGGGAGCACCGAGAATGGCAACGGCAGAAGCAA 501
********************************* **** **** ** *
consensus_1652#0 CTGATCCTGTCCGGTGCGGGCGACACATACCGGAGGAGATGACCAGCTCGGTCTTTCTGG 658
consensus_1652#1 CTGATCCTGGACGGC-------AAGTATAGCCTGGAAAACTGTC--CCCGGTCTTT---- 548
********* *** * *** * * * * * * ********
consensus_1652#0 TGAACCAGAAAACGAACGTCAACATCCTGAACAAGCGGGAAAAGCTGAAAACGATCCGAG 718
consensus_1652#1 --AATTCCACTGCA-----CAGTATCGTG--CTGGCGAAAGAAATCGAA-------CGTG 592
** * * ** *** ** * *** * ** *** ** *
consensus_1652#0 AGAAAAATGCGGAACGTTTGATCAAACAGGGCCACCGC-TGGGAGCGGGAACGGCAGCAG 777
consensus_1652#1 AGCGTAACCTGAT---CCTGTCCGGTGCGGGCGACAGCATACCGGAGGAGATGAC--CAG 647
** ** * ** * **** ** ** * * ** * * * ***
consensus_1652#0 ATGGAGGAGCAGAGCCGCGAGCGCGAGATCGAACGGCGCACCAAGCGCGAGGCACTGCTC 837
consensus_1652#1 CTCGG---TCTTTCTGGTGAACCAGAAAACGAACGT------------------------ 680
* * * * ** * ** * ******
consensus_1652#0 GAGCAGGAAAAGCTGTACATGATCGACGGCGGCATCGACGGGGGCGCTCGCAAGCAGCGA 897
consensus_1652#1 ------------------------------------------------------------
consensus_1652#0 CCGATGCAGCGACAGAACGAGGTGCACGAGTACCAGGAGT 937
consensus_1652#1 ----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||