These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1784#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1080 fasta sequence [AGGCTTACAGGAGTATCTGGTGCAGCGTATCAGACCTTGCCAAGGGTAGCTGTTTGGCCGACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTACCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGCTGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGACGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGTACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAAATTCACAGCTGTGCCTATGATCGAAATAATCTGTTCTACGTCATCATTCAATTTTCTAATGTATATGAAAACCCACCACGAATGCTCACTGGACGGGCATTAATCTCGGCAGAAGTGGCATCAACCATACTGTGCTGCATCGAAGACTAGAAGCGTGGCAGCGGACGCGCCATTTTATGAGTGTCGCCGAAATCGAAATTCATGAACAGGTGTTCAAATCCGGCATCGTCATGGAAACGGGCGATTGGCGTACACGAAAAGGTATTGCTCATACACGGCACGAAATCTGGACACACGGTACATGATTAGNCTCGTGGCTGTATCATGATGCTCTGGTTAAGTCCAATAACAACNACACAGAAATAAAATTTCACATTTGGCTCCGGATTNCAACCTAGGTATTTCCAAATAGTCCGNCCATAATTNACCCGCANTACTTAATCAACNGGNNCNNGCANCGAACGCAAACTAGGACCGGGAGGAGGANACANACATTGANCCCACCANCGGCACTCAACACGCGCAANAAACGGCACGTCNCACGGGCGGAACAACCCAAACGGGGTGGAAACACCAACAAACCGGGGCCCTACANNCGGTGGAGCAACTACACAAACATGTCCCCGAGANCAAAACACCAGAGATCCGGCGACCCCCGGCGGCACCNGAACAAACCAAAACGCACCANCNACGCCAAACANTGGCCACACAAAAACAACAANNAGAACGAAAC] [+] EMBL AL694105 [AGGCTTACAGGAGTATCTGGTGCAGCGTATCAGACCTTGCCAAGGGTAGCTGTTTGGCCGACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTACCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGCTGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGACGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGTACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAAATTCACAGCTGTGCCTATGATCGAAATAATCTGTTCTACGTCATCATTCAATTTTCTAATGTATATGAAAACCCACCACGAATGCTCACTGGACGGGCATTAATCTCGGCAGAAGTGGCATCAACCATACTGTGCTGCATCGAAGACTAGAAGCGTGGCAGCGGACGCGCCATTTTATGAGTGTCGCCGAAATCGAAATTCATGAACAGGTGTTCAAATCCGGCATCGTCATGGAAACGGGCGATTGGCGTACACGAAAAGGTATTGCTCATACACGGCACGAAATCTGGACACACGGTACATGATTAGNCTCGTGGCTGTATCATGATGCTCTGGTTAAGTCCAATAACAACNACACAGAAATAAAATTTCACATTTGGCTCCGGATTNCAACCTAGGTATTTCCAAATAGTCCGNCCATAATTNACCCGCANTACTTAATCAACNGGNNCNNGCANCGAACGCAAACTAGGACCGGGAGGAGGANACANACATTGANCCCACCANCGGCACTCAACACGCGCAANAAACGGCACGTCNCACGGGCGGAACAACCCAAACGGGGTGGAAACACCAACAAACCGGGGCCCTACANNCGGTGGAGCAACTACACAAACATGTCCCCGAGANCAAAACACCAGAGATCCGGCGACCCCCGGCGGCACCNGAACAAACCAAAACGCACCANCNACGCCAAACANTGGCCACACAAAAACAACAANNAGAACGAAAC] consensusID : consensus_1784#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence [GCAGAATCGGCACGTGGGGACTTGCCAAGGGTAGCTGTTTGGCCGACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTACCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGCTGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGACGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGTACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAGAAGTTCACAGCTGTGCCTATGATCGAGAGATAATCTGTTCTACGTCATCATTCAAGTTTTGAATGTATATGAAAACCCGANCACGAATGCTCACTGGAGGGCATTGAGTCTCGGCAGAAAGTGGCATCGAACGATACTGTGCTGCATCGAAGCACTAGAAGCCGTGGCCAGCCGGACGGCCGCCAATTNCTGGCATGAGTGTCGCGAAG] [+] EMBL BX469798 [GCAGAATCGGCACGTGGGGACTTGCCAAGGGTAGCTGTTTGGCCGACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTACCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGCTGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGACGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGTACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAGAAGTTCACAGCTGTGCCTATGATCGAGAGATAATCTGTTCTACGTCATCATTCAAGTTTTGAATGTATATGAAAACCCGANCACGAATGCTCACTGGAGGGCATTGAGTCTCGGCAGAAAGTGGCATCGAACGATACTGTGCTGCATCGAAGCACTAGAAGCCGTGGCCAGCCGGACGGCCGCCAATTNCTGGCATGAGTGTCGCGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1784#0 AGGCTTACAGGAGTATCTGGTGCAGCGTATCAGACCTTGCCAAGGGTAGCTGTTTGGCCG 60 consensus_1784#1 ---------------GCAGAATCGGCACGTGGGGACTTGCCAAGGGTAGCTGTTTGGCCG 45 * * * ** * * ************************* consensus_1784#0 ACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTA 120 consensus_1784#1 ACTATCGGTGGAATTCCGGTTCGGCTTACAAGGGTATTAGCTGGGATGAGCATCTGCCTA 105 ************************************************************ consensus_1784#0 CCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGC 180 consensus_1784#1 CCGATTCGGCCATTATTTTCCACCTCTTCTGCACGTATCTGGATAGTCAGCTGCGCCCGC 165 ************************************************************ consensus_1784#0 TGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGA 240 consensus_1784#1 TGCCACAACCGGGTGGGCGCCCCTTCTTCAACCGCTACGTCGTAGTAGGCGACAAGAAGA 225 ************************************************************ consensus_1784#0 CGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGT 300 consensus_1784#1 CGACCAAGGAAACACTTGCGGAAGTGAACACCAAAAATAAGGCCAAGTGTGCCATTCTGT 285 ************************************************************ consensus_1784#0 ACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAAA--TTCACAGCTG 358 consensus_1784#1 ACTCAAACCCCCTGAAGCCCAAATTTAACTTCGTTTCGGATGACAAGAAGTTCACAGCTG 345 ********************************************** * ********** consensus_1784#0 TGCCTATGATCGAAA--TAATCTGTTCTACGTCATCATTCAATTTTCTAATGTATATGAA 416 consensus_1784#1 TGCCTATGATCGAGAGATAATCTGTTCTACGTCATCATTCAAGTTTTGAATGTATATGAA 405 ************* * ************************* *** ************ consensus_1784#0 AACCC-ACCACGAATGCTCACTGGACGGGCATTAA-TCTCGGCAGAA-GTGGCATC-AAC 472 consensus_1784#1 AACCCGANCACGAATGCTCACTGGA-GGGCATTGAGTCTCGGCAGAAAGTGGCATCGAAC 464 ***** * ***************** ******* * *********** ******** *** consensus_1784#0 CATACTGTGCTGCATCGAAG-ACTAGAAGC-GTGGCAG--CGGACG--CGCCATTTT--- 523 consensus_1784#1 GATACTGTGCTGCATCGAAGCACTAGAAGCCGTGGCCAGCCGGACGGCCGCCAATTNCTG 524 ******************* ********* ***** ****** ***** ** consensus_1784#0 --ATGAGTGTCGCCGAAATCGAAATTCATGAACAGGTGTTCAAATCCGGCATCGTCATGG 581 consensus_1784#1 GCATGAGTGTCGCGAAG------------------------------------------- 541 *********** * consensus_1784#0 AAACGGGCGATTGGCGTACACGAAAAGGTATTGCTCATACACGGCACGAAATCTGGACAC 641 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 ACGGTACATGATTAGNCTCGTGGCTGTATCATGATGCTCTGGTTAAGTCCAATAACAACN 701 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 ACACAGAAATAAAATTTCACATTTGGCTCCGGATTNCAACCTAGGTATTTCCAAATAGTC 761 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 CGNCCATAATTNACCCGCANTACTTAATCAACNGGNNCNNGCANCGAACGCAAACTAGGA 821 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 CCGGGAGGAGGANACANACATTGANCCCACCANCGGCACTCAACACGCGCAANAAACGGC 881 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 ACGTCNCACGGGCGGAACAACCCAAACGGGGTGGAAACACCAACAAACCGGGGCCCTACA 941 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 NNCGGTGGAGCAACTACACAAACATGTCCCCGAGANCAAAACACCAGAGATCCGGCGACC 1001 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 CCCGGCGGCACCNGAACAAACCAAAACGCACCANCNACGCCAAACANTGGCCACACAAAA 1061 consensus_1784#1 ------------------------------------------------------------ consensus_1784#0 ACAACAANNAGAACGAAAC 1080 consensus_1784#1 ------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||