These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1825#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 719 fasta sequence [CACCGCCACCCAGCCAGTAGTAAGCCGCTCGCTGGCAGCTCAAGTGGGGCTTCTTCCGGCTGAACTATACTACCCCCCTCCCGAAACGCTCACTTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGCACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAGCTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAACCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCCGGCGATCAACACCTCCGGCTTCAGCAGGGGAATCCGAGCGAGCTCCCCGCGTCGGTGTGTTTCGCGCAAACACCCGCACACACGCACACAAACACTATAGCAAGAAGCGAGATAGTAGACGAGTGCAACGGAGGGATTGATGCACCGACCGTATCGATCTGGGTCACTTAGCTCTTAGCGGTCTAGCAGCGACTAGCACACATCCTCTGCCGAAACGACACCCGGACGAGAGAGCACGATGCCGGGCAATGGATTATTAACTCTACCAAACTGCGTAATGCAAATGTCGGCCGTTTTTCCGTGCTGGTCGCCCCCGTTAGTTCGATGACGCCAGTTAGAGAGGGGCCGCGGAAAACCTCTCGAGCCTCCTTTGTCGCTCGGTTGCTGCGACGGTGGTGTGGC] [+] EMBL BX617032 [CACCGCCACCCAGCCAGTAGTAAGCCGCTCGCTGGCAGCTCAAGTGGGGCTTCTTCCGGCTGAACTATACTACCCCCCTCCCGAAACGCTCACTTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGCACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAGCTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAACCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCCGGCGATCAACACCTCCGGCTTCAGCAGGGGAATCCGAGCGAGCTCCCCGCGTCGGTGTGTTTCGCGCAAACACCCGCACACACGCACACAAACACTATAGCAAGAAGCGAGATAGTAGACGAGTGCAACGGAGGGATTGATGCACCGACCGTATCGATCTGGGTCACTTAGCTCTTAGCGGTCTAGCAGCGACTAGCACACATCCTCTGCCGAAACGACACCCGGACGAGAGAGCACGATGCCGGGCAATGGATTATTAACTCTACCAAACTGCGTAATGCAAATGTCGGCCGTTTTTCCGTGCTGGTCGCCCCCGTTAGTTCGATGACGCCAGTTAGAGAGGGGCCGCGGAAAACCTCTCGAGCCTCCTTTGTCGCTCGGTTGCTGCGACGGTGGTGTGGC] consensusID : consensus_1825#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence [CTCCGCACAGACGGCTGCGTTCGGGCTGCCAGGCAGCTCCTTCCCGTCCGCAATGGCCGACGATTGCATCAGCTTCTGGTGGATGTTCTTTATCAGCACGGTTTTCGCGTACTCGGCCGCGTACTCGCCGCCGTGCCCGTCGAAGATGGCAAACAGGGAAATGCCGCTGCTGTTGATGTTTTCACTTATCACAAATCTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGCACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAGCTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAACCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCCGGCGATCAGCACCTCCGGCTTCCCCACGCGTCCGCGG] [-] EMBL BM650487 [CTCCGCACAGACGGCTGCGTTCGGGCTGCCAGGCAGCTCCTTCCCGTCCGCAATGGCCGACGATTGCATCAGCTTCTGGTGGATGTTCTTTATCAGCACGGTTTTCGCGTACTCGGCCGCGTACTCGCCGCCGTGCCCGTCGAAGATGGCAAACAGGGAAATGCCGCTGCTGTTGATGTTTTCACTTATCACAAATCTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGCACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAGCTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAACCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCCGGCGATCAGCACCTCCGGCTTCCCCACGCGTCCGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1825#0 ------------------------------------------------------------ consensus_1825#1 CTCCGCACAGACGGCTGCGTTCGGGCTGCCAGGCAGCTCCTTCCCGTCCGCAATGGCCGA 60 consensus_1825#0 ------------------------------------CACCGCCACCCAGCCAGTAGTAAG 24 consensus_1825#1 CGATTGCATCAGCTTCTGGTGGATGTTCTTTATCAGCACGGTTTTCGCGTACTCGGCCGC 120 *** * * * * consensus_1825#0 CCGCTCGCTGGCA-GCTCAAGTGGGGCTTCTTCCGGCTGAACTATACTACCCCC------ 77 consensus_1825#1 GTACTCGCCGCCGTGCCCGTCGAAGATGGCAAACAGGGAAATGCCGCTGCTGTTGATGTT 180 ***** * * ** * * * * * ** ** * consensus_1825#0 CTCCCGAAACGCTCACTTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGC 137 consensus_1825#1 TTCACTTATCACAAATCTGTCCTCCATCTTGGCCCGGCGGCCTTGGACCGCGTACACCGC 240 ** * * * * * ******************************************* consensus_1825#0 ACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAG 197 consensus_1825#1 ACTGCCGGTCGTCCGCTCGTCCCAGCTGTGCTTCTCCGCGGCCGATGCCAGCATGGACAG 300 ************************************************************ consensus_1825#0 CTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAA 257 consensus_1825#1 CTTGCCGGACCGGCCGCCCGCCTTCCCGAGCCCGAGCGAGTTGCTGATGCGCCCGATGAA 360 ************************************************************ consensus_1825#0 CCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCC 317 consensus_1825#1 CCCGCGGCTCCATACCTCCGCTGCTTGCAGGTACAGGACGAACAGACAGATTAGCAGGCC 420 ************************************************************ consensus_1825#0 GGCGATCAACACCTCCGGCTTCAGCAGGGGAATCCGAGCGAGCTCCCCGCGTCGGTGTGT 377 consensus_1825#1 GGCGATCAGCACCTCCGGCTTCCCCACGCGTCCGCGG----------------------- 457 ******** ************* ** * * ** consensus_1825#0 TTCGCGCAAACACCCGCACACACGCACACAAACACTATAGCAAGAAGCGAGATAGTAGAC 437 consensus_1825#1 ------------------------------------------------------------ consensus_1825#0 GAGTGCAACGGAGGGATTGATGCACCGACCGTATCGATCTGGGTCACTTAGCTCTTAGCG 497 consensus_1825#1 ------------------------------------------------------------ consensus_1825#0 GTCTAGCAGCGACTAGCACACATCCTCTGCCGAAACGACACCCGGACGAGAGAGCACGAT 557 consensus_1825#1 ------------------------------------------------------------ consensus_1825#0 GCCGGGCAATGGATTATTAACTCTACCAAACTGCGTAATGCAAATGTCGGCCGTTTTTCC 617 consensus_1825#1 ------------------------------------------------------------ consensus_1825#0 GTGCTGGTCGCCCCCGTTAGTTCGATGACGCCAGTTAGAGAGGGGCCGCGGAAAACCTCT 677 consensus_1825#1 ------------------------------------------------------------ consensus_1825#0 CGAGCCTCCTTTGTCGCTCGGTTGCTGCGACGGTGGTGTGGC 719 consensus_1825#1 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||