These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1880#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence [CCGTGACAAGCACGCTGATCGTTCCGACCACTACGACCGAGGTGCGCCGGGCGGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCCGGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCCGGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCTGGTCGAGTACCGGACCGACACCGTTACCCGCACCTCGACCTGCACCGTGACGGAGCTGTTCCCCACCACCTACTACAGCACGTACATCTCCACCAGCTACGCGCCTCCGGTGACCGATGTCACCTACCTGACGGAAACTTCCTACCGCACGCTTACCTCCACCCAGCTCAGTACGCAAATCCGTACGCAAACGGAGACGACCTCCGTCTATCGCACCAGCACGGAGACGATCCGGGCGACGCGTACGCTCACGGAAACGGCCACCGTTACCGAGTCCTGTGCACCGCCACCACCACCGCCACTAAACAACGAGTATCT] [+] EMBL BX628557 [CCGTGACAAGCACGCTGATCGTTCCGACCACTACGACCGAGGTGCGCCGGGCGGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCCGGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCCGGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCTGGTCGAGTACCGGACCGACACCGTTACCCGCACCTCGACCTGCACCGTGACGGAGCTGTTCCCCACCACCTACTACAGCACGTACATCTCCACCAGCTACGCGCCTCCGGTGACCGATGTCACCTACCTGACGGAAACTTCCTACCGCACGCTTACCTCCACCCAGCTCAGTACGCAAATCCGTACGCAAACGGAGACGACCTCCGTCTATCGCACCAGCACGGAGACGATCCGGGCGACGCGTACGCTCACGGAAACGGCCACCGTTACCGAGTCCTGTGCACCGCCACCACCACCGCCACTAAACAACGAGTATCT] consensusID : consensus_1880#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 246 fasta sequence [GCAGAATCGCACGAGGTGAAGCTGATCGTTCCGACCACTACGNACCGAGGTGCGCCGGGCGGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCCGGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCCGGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCNTGGTCGAGTACCGGANNCGACANCGTT] [+] EMBL BX469432 [GCAGAATCGCACGAGGTGAAGCTGATCGTTCCGACCACTACGNACCGAGGTGCGCCGGGCGGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCCGGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCCGGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCNTGGTCGAGTACCGGANNCGACANCGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1880#0 ------CCGTGACAAGC-ACGCTGATCGTTCCGACCACTACGA-CCGAGGTGCGCCGGGC 52 consensus_1880#1 GCAGAATCGCACGAGGTGAAGCTGATCGTTCCGACCACTACGNACCGAGGTGCGCCGGGC 60 ** * * * ********************** **************** consensus_1880#0 GGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCC 112 consensus_1880#1 GGTCGAAACACAAACCAGCTACCGCACGACCACTCACACCCAAAGTGTCACACTGCCTCC 120 ************************************************************ consensus_1880#0 GGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCC 172 consensus_1880#1 GGTGACGCACACCTCCTCGCTAACCACCACGATTGCACGGCTCGAAACCGTCACCAGCCC 180 ************************************************************ consensus_1880#0 GGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCT-GGTCGAGTACCGGACC-GAC 230 consensus_1880#1 GGTCGTACGCGTGGAGTACGTTACGGAGCGTTACCCGCNTGGTCGAGTACCGGANNCGAC 240 ************************************** ************** *** consensus_1880#0 ACCGTTACCCGCACCTCGACCTGCACCGTGACGGAGCTGTTCCCCACCACCTACTACAGC 290 consensus_1880#1 ANCGTT------------------------------------------------------ 246 * **** consensus_1880#0 ACGTACATCTCCACCAGCTACGCGCCTCCGGTGACCGATGTCACCTACCTGACGGAAACT 350 consensus_1880#1 ------------------------------------------------------------ consensus_1880#0 TCCTACCGCACGCTTACCTCCACCCAGCTCAGTACGCAAATCCGTACGCAAACGGAGACG 410 consensus_1880#1 ------------------------------------------------------------ consensus_1880#0 ACCTCCGTCTATCGCACCAGCACGGAGACGATCCGGGCGACGCGTACGCTCACGGAAACG 470 consensus_1880#1 ------------------------------------------------------------ consensus_1880#0 GCCACCGTTACCGAGTCCTGTGCACCGCCACCACCACCGCCACTAAACAACGAGTATCT 529 consensus_1880#1 ----------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||