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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1964#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 940 fasta sequence
[GTTTCAAAAATTGTGAATGCCCCTTAATACAGTTCAAATCACAAAAAAAACTGATCTCGTTCAATAAAAAAGCTGTTCTTAGAGAGAGGGGGTTGAAATCTTGCATTTTTTGCATTACGTAATTAAATGATTATGTCCTATCTAATTCATTTTTTTCTTAGGGCGTCCTTTGCATTTCCGTGAGAATGAGCTACGAGAAACGCTTTTTATTGTGCCGGATACAACGGCACTTTTTTTCGCATTTCGTAGTTTTTTTTGAAAAAAATTCTCAAGGGATTCAAAATCTACTTTTTGGCCATCTACATTCCCTACGTCAGCAAAAAGCCTCAATACATTTACATATCGTCGAAAGGCTATTTTCGGTCCAGTAACTCCTCTACCGCTCCAGCTACATTCAACCAAAAACAATCTATTGAACATAAGGTACAAAGCTTCGTGAAGTCGCTCCATTGTTGCTGTGGCCTTCATTTTGGCCTGCAATTTACGCTTCACGTCCTCAAACTGATCCTCTAAACCTAGATTCTGCTCGAAATCAATTAGCTCCTTTTTAGATGCAATCAACGTAATAATTTCCTCGTTTTCTTGCGTTGGCTGTATCATTTCGGGCGTTTCTTGCGGAACTGGATTTTGGTTCGCGTTGAAGCAGCCACTCAATAATCTCGTGCGTTTTGCATAAAAATGTCAACAACGATTTTGGTTAGCATTTGAATTTGTTTGCTGTTTAGCAGGGCAATCTCAGCGCATTTGCAATGATGTTCTGCAGTCCCGCAACAGCGTACAGAAGAAGCTTCGGTGAATTGACGATGCATTGTTCATAGGTTGTAGCAGAGCGAAGAAGATAGGTTTTTATCTCTACGATATTGATGATAGATCATCCGATTTATTTACCAAAAGAGGGGCAACGATCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAG]
[+] EMBL CNS08H0W [GTTTCAAAAATTGTGAATGCCCCTTAATACAGTTCAAATCACAAAAAAAACTGATCTCGTTCAATAAAAAAGCTGTTCTTAGAGAGAGGGGGTTGAAATCTTGCATTTTTTGCATTACGTAATTAAATGATTATGTCCTATCTAATTCATTTTTTTCTTAGGGCGTCCTTTGCATTTCCGTGAGAATGAGCTACGAGAAACGCTTTTTATTGTGCCGGATACAACGGCACTTTTTTTCGCATTTCGTAGTTTTTTTTGAAAAAAATTCTCAAGGGATTCAAAATCTACTTTTTGGCCATCTACATTCCCTACGTCAGCAAAAAGCCTCAATACATTTACATATCGTCGAAAGGCTATTTTCGGTCCAGTAACTCCTCTACCGCTCCAGCTACATTCAACCAAAAACAATCTATTGAACATAAGGTACAAAGCTTCGTGAAGTCGCTCCATTGTTGCTGTGGCCTTCATTTTGGCCTGCAATTTACGCTTCACGTCCTCAAACTGATCCTCTAAACCTAGATTCTGCTCGAAATCAATTAGCTCCTTTTTAGATGCAATCAACGTAATAATTTCCTCGTTTTCTTGCGTTGGCTGTATCATTTCGGGCGTTTCTTGCGGAACTGGATTTTGGTTCGCGTTGAAGCAGCCACTCAATAATCTCGTGCGTTTTGCATAAAAATGTCAACAACGATTTTGGTTAGCATTTGAATTTGTTTGCTGTTTAGCAGGGCAATCTCAGCGCATTTGCAATGATGTTCTGCAGTCCCGCAACAGCGTACAGAAGAAGCTTCGGTGAATTGACGATGCATTGTTCATAGGTTGTAGCAGAGCGAAGAAGATAGGTTTTTATCTCTACGATATTGATGATAGATCATCCGATTTATTTACCAAAAGAGGGGCAACGATCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAG]
consensusID : consensus_1964#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 912 fasta sequence
[AACGNNTCTTTCGATAGTCCCATTGTTANTTNNCCGGCCCTTTAATTTACCTTATNTTTTANCATAGTGTAGTTGCGGTGTCNGTATNTTAGGGTCGCTTGTANAGNCGTNNGGCGGGGCGTNCCCCAAAGTGGTGAGACCCTGNTCCTTGCTGTGTATCCCCGTTGCGTTCCCAGNGGTGNTNACGAGGNTGCCAAATTNGCCCNGTGTTGTTGANCCGTTANTCTTTAGTGTGTGGAAACCAAATGGTATAGGGGGTTTACCNANGAGTGGGCCCTGNTGTCCGGGTGTGGTAATAGTTCGCTGCCCAATTTGGTGTTTCNTGTTGGGCCACGTTTGCCAAGTTTGTATNTGGCGCCTACTGCCTATATTGTGTTNTANACTGCCTTTCTAACNGNTTCCTCGTTCNTTACTTGGGTATTCCTCTTTNTGTATATCAACTCNTTAGTATGTCCGTGGGCCTCCGGTATATTATCCAATATTNTAAGCCTCCCGTTTNTGTTTAAGTAATGNCCTAATATGTCATANCGGTTGATAAGAATTGTGCCCTCGGTTTTTGCTGTGGCGTTGNCTGGTNATGCAATGTTTCAGGGGCAGTTGTTGCTTGTGCGGGAATACTGGGATNTGTGGGTGCAGCAGTGTGGAGACGCAAGCACAACCTGCAAATGAATGCTGCAGTGCAGTGTGTGTNGCATGTGTTGAATGGTGCAAACAACAGATGTGTTGGGTTGAGCTGTGTGGAATTTGTTTGCTGTTTAGCAGGCCAATCTCAGCGCATTNGCATATGATGTCCTGCAGTCCCAGCATACAGCGTACAAGAAGAAGCTTCGGTGAATTGACAGATGCATTGTTCATAGGTTGGTAGCAGAGCGAAGAAGATAGTTTTATCTATAAACCGCGGGGGNATTCTTG]
[-] EMBL AL694937 [AACGNNTCTTTCGATAGTCCCATTGTTANTTNNCCGGCCCTTTAATTTACCTTATNTTTTANCATAGTGTAGTTGCGGTGTCNGTATNTTAGGGTCGCTTGTANAGNCGTNNGGCGGGGCGTNCCCCAAAGTGGTGAGACCCTGNTCCTTGCTGTGTATCCCCGTTGCGTTCCCAGNGGTGNTNACGAGGNTGCCAAATTNGCCCNGTGTTGTTGANCCGTTANTCTTTAGTGTGTGGAAACCAAATGGTATAGGGGGTTTACCNANGAGTGGGCCCTGNTGTCCGGGTGTGGTAATAGTTCGCTGCCCAATTTGGTGTTTCNTGTTGGGCCACGTTTGCCAAGTTTGTATNTGGCGCCTACTGCCTATATTGTGTTNTANACTGCCTTTCTAACNGNTTCCTCGTTCNTTACTTGGGTATTCCTCTTTNTGTATATCAACTCNTTAGTATGTCCGTGGGCCTCCGGTATATTATCCAATATTNTAAGCCTCCCGTTTNTGTTTAAGTAATGNCCTAATATGTCATANCGGTTGATAAGAATTGTGCCCTCGGTTTTTGCTGTGGCGTTGNCTGGTNATGCAATGTTTCAGGGGCAGTTGTTGCTTGTGCGGGAATACTGGGATNTGTGGGTGCAGCAGTGTGGAGACGCAAGCACAACCTGCAAATGAATGCTGCAGTGCAGTGTGTGTNGCATGTGTTGAATGGTGCAAACAACAGATGTGTTGGGTTGAGCTGTGTGGAATTTGTTTGCTGTTTAGCAGGCCAATCTCAGCGCATTNGCATATGATGTCCTGCAGTCCCAGCATACAGCGTACAAGAAGAAGCTTCGGTGAATTGACAGATGCATTGTTCATAGGTTGGTAGCAGAGCGAAGAAGATAGTTTTATCTATAAACCGCGGGGGNATTCTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1964#0 GTTTCAAAAATTGTGAATGCCCCTTAATACAGTTCAAATCACAAAAAAAACTGATCTCGT 60
consensus_1964#1 ---------------AACGNNTCTTTCGATAGTCCCATTGTTANTTN--NCCGGCCC--T 41
** * *** * *** * * * * * * * *
consensus_1964#0 TCAATAAAAAAGCTGTTCTTAGAGAGAGGGGGTTGAAATCTTGCATTTT----TTGCATT 116
consensus_1964#1 TTAATTTACCTTATNTTTTANCATAGTGTAGTTGCGGTGTCNGTATNTTAGGGTCGC-TT 100
* *** * * ** * * ** * * * * ** ** * ** **
consensus_1964#0 ACGTAATTAAATGATTATGTCCTATCTAATTCATTTTTTTCTTAGGGCGTCCTTTGCATT 176
consensus_1964#1 GTANAGNCGTNNGGCGGGGCGTNCCCCAAAGTGGTGAGACCCTGNTCCTTGCTGTGTATC 160
* * * * ** * * * * * ** ** **
consensus_1964#0 TCCGTGAGAATGAGCTACGAGAAACGCTTTTTATTGTGCCGGATACAACGGCACTTTTTT 236
consensus_1964#1 CCCGT-----TGCGTTCCCAGNGGTGNTNACGAGGNTGCCAAAT----TNGCCCNGTGTT 211
**** ** * * * ** * * * **** ** ** * * **
consensus_1964#0 TCGCATTTCGTAGTTTTTTTTGAAAAAAATTCTCAAGGGATTCAAAATCTACTTTTTGGC 296
consensus_1964#1 GTTGANCCGTTANTCTTTAGTGTGTGGAAACCAAATGGTATAGGGGGTTTACCNANGAGT 271
* ** * *** ** ** * * ** ** * *** *
consensus_1964#0 CATCTACATTCCCTACGT-CAGCAAAAAGCCTCAATACATTTACATATC----GTCGAAA 351
consensus_1964#1 GGGCCCTGNTGTCCGGGTGTGGTAATAGTTCGCTGCCCAATTTGGTGTTTCNTGTTGGGC 331
* * * ** * ** * * * ** ** * * ** *
consensus_1964#0 GGCTATTTTCGGTCCAGTAACT--CCTCTACCGCTCCAGCTACATTCAAC--------CA 401
consensus_1964#1 CACGTTTGCCAAGTTTGTATNTGGCGCCTACTGCCTATATTGTGTTNTANACTGCCTTTC 391
* ** * *** * * **** ** * ** *
consensus_1964#0 AAAACAATCTATTGAACATAA----GGTACAAAGCTTCGTGAA-GTCGCTCCATTGTTG- 455
consensus_1964#1 TAACNGNTTCCTCGTTCNTTACTTGGGTATTCCTCTTTNTGTATATCAACTCNTTAGTAT 451
** * * * * * * **** *** ** * ** * ** *
consensus_1964#0 --CTGTGGCCTTC----ATTTTGGCCTGCAATTTACGCTTCACGTCCTCA---AACTGAT 506
consensus_1964#1 GTCCGTGGGCCTCCGGTATATTATCCAATATTNTAAGCCTCCCGTTTNTGTTTAAGTAAT 511
* **** * ** ** ** ** * * ** ** ** *** ** * **
consensus_1964#0 CCTCTAAACCTAGATTCTGCTCGAAATCAATTAGCTCCT---TTTTAGATGCAA--TCAA 561
consensus_1964#1 GNCCTAATATGTCATANCGGTTGATAAGAATTGTGCCCTCGGTTTTTGCTGTGGCGTTGN 571
**** ** * * ** * **** *** **** * ** *
consensus_1964#0 C--GTAATA-ATTTCCTCGTTTTCTTGCGTTGGCTGTATC---ATTTCGGGCGTTTCTTG 615
consensus_1964#1 CTGGTNATGCAATGTTTCAGGGGCAGTTGTTGCTTGTGCGGGAATACTGGGATNTGTGGG 631
* ** ** * * ** * **** *** ** *** * *
consensus_1964#0 CGGAACTGGATTTTGGTTCGCGTTGAAGCAGCCACTCAAT-----AATCTCGTGCGTTTT 670
consensus_1964#1 TGCAGCAGTGTGGAGACGCAAGCACAACCTGCAAATGAATGCTGCAGTGCAGTGTGTGTN 691
* * * * * * * * ** * ** * * *** * * *** ** *
consensus_1964#0 GCAT------AAAAATGTCAACAAC-GAT---TTTGGTTAGCATTTG---AATTTGTTTG 717
consensus_1964#1 GCATGTGTTGAATGGTGCAAACAACAGATGTGTTGGGTTGAGCTGTGTGGAATTTGTTTG 751
**** ** ** ****** *** ** **** * ** **********
consensus_1964#0 CTGTTTAGCAGGGCAATCTCAGCGCATTTGCA-ATGATGTTCTGCAGTCCC-GCA-ACAG 774
consensus_1964#1 CTGTTTAGCAGGCCAATCTCAGCGCATTNGCATATGATGTCCTGCAGTCCCAGCATACAG 811
************ *************** *** ******* ********** *** ****
consensus_1964#0 CGTACA-GAAGAAGCTTCGGTGAATTGAC-GATGCATTGTTCATAGGTTG-TAGCAGAGC 831
consensus_1964#1 CGTACAAGAAGAAGCTTCGGTGAATTGACAGATGCATTGTTCATAGGTTGGTAGCAGAGC 871
****** ********************** ******************** *********
consensus_1964#0 GAAGAAGATAGGTTTTTATCTCTACGATATTGATGATAGATCATCCGATTTATTTACCAA 891
consensus_1964#1 GAAGAAGATAG--TTTTATCTATAAACCGCGGGGGNATTCTTG----------------- 912
*********** ******** ** * * *
consensus_1964#0 AAGAGGGGCAACGATCCAGTTGGCCAACAGTTCTCGAGGAATTCCGCAG 940
consensus_1964#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||