These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2025#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence [CCGGGGTAAGAGTATAACACCTCTACGAACGATAGATAGTCCATCGTACTAAACAAAACAAAAAACAAGAAAAACATTCATTCACGCTAAACTGTTCACTCTTGGCTGCCGTTCGTCATCTTTGCCGCAAGTGGCGGTGCGAGATGTTTGTTTTTATAGAGCTCCTTCGGCTCCCTAGTCTCGGTGTGTTTTGCCAGCAAAATATGTACGTTAGTGTGTCGATTTCGGTTAGTGTCGCGTATCACTTAGTATCACTGCGGCTGTGCGTCTTTCCGCTAGTGGTTTTTTTTTGCCCCATCATTTACTTGTTAAAAGCAATTGTTACGACTTGATGTATAATAAGGCTACACAGGGTGCTTTAGAAATCGGTTAACTCGGACTGTTTGTTGCGTGTGTATGTGTGTGTGTGTGTGTGTGCGTGTGCGTGTGCGTGCGTGTGTGCATTTAGTTTTTAGGAGTCACTTTCGGGAGCGGGAGTAGGACATGAGGAAATTGAATGGAAATCAGATCTCGTATCAATCGAAACCATTGCATAGATTCGCAACCAAAGTACAGAAACACACTCGCCTGCATGTACACAATAGAAGAACAAGAAGAAGAAGAAGTAGAAGAAATACACAAACAAATATGTCCTACAATTCCTGCTCTCTATTACGCTATCAGAATAGGTGTTTAGGAAGTCGGTGGACTGTGC] [+] EMBL BM639353 [CCGGGGTAAGAGTATAACACCTCTACGAACGATAGATAGTCCATCGTACTAAACAAAACAAAAAACAAGAAAAACATTCATTCACGCTAAACTGTTCACTCTTGGCTGCCGTTCGTCATCTTTGCCGCAAGTGGCGGTGCGAGATGTTTGTTTTTATAGAGCTCCTTCGGCTCCCTAGTCTCGGTGTGTTTTGCCAGCAAAATATGTACGTTAGTGTGTCGATTTCGGTTAGTGTCGCGTATCACTTAGTATCACTGCGGCTGTGCGTCTTTCCGCTAGTGGTTTTTTTTTGCCCCATCATTTACTTGTTAAAAGCAATTGTTACGACTTGATGTATAATAAGGCTACACAGGGTGCTTTAGAAATCGGTTAACTCGGACTGTTTGTTGCGTGTGTATGTGTGTGTGTGTGTGTGTGCGTGTGCGTGTGCGTGCGTGTGTGCATTTAGTTTTTAGGAGTCACTTTCGGGAGCGGGAGTAGGACATGAGGAAATTGAATGGAAATCAGATCTCGTATCAATCGAAACCATTGCATAGATTCGCAACCAAAGTACAGAAACACACTCGCCTGCATGTACACAATAGAAGAACAAGAAGAAGAAGAAGTAGAAGAAATACACAAACAAATATGTCCTACAATTCCTGCTCTCTATTACGCTATCAGAATAGGTGTTTAGGAAGTCGGTGGACTGTGC] consensusID : consensus_2025#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 467 fasta sequence [AATTCCCCAGGTAAATCACAACAATATGTCTACAATTCTGCTCTCTATTACGCTATCAGAATAGGTGTTTAGGAAGCCGGTGGACAGTGCACAGACAAACGAACTCTCTCGGCCTGTGTCGGACGGTAGCATCACAGCATCGGTGCCAGGGGTAGTAAGCTTTGCGCATTCCGTCTCTGCCGCAAGGGCAGACGTTTGCGAAATCTGTCTGTGTGTAAATAGAACTGATAAGCGAGCTTTGTTTCGTTCTTATGAACCCACTAAACAGCTAATTCACGGTGAATATTAGTCAATCACTGTGCTCTACTGTTTANAACAAAATATTAAGGAAGCTTATCAATCACACTGTACACTGTGTACACTCTGATGANCTACGACAGTGNGACGATTTNCNCGCGNGCATCCTTCAGGCAACGATCCGGAGTGATGCTTCCAGTGAGTTCTCGTTGCCGGGATAGTGCCGGAAN] [+] EMBL AL695311 [AATTCCCCAGGTAAATCACAACAATATGTCTACAATTCTGCTCTCTATTACGCTATCAGAATAGGTGTTTAGGAAGCCGGTGGACAGTGCACAGACAAACGAACTCTCTCGGCCTGTGTCGGACGGTAGCATCACAGCATCGGTGCCAGGGGTAGTAAGCTTTGCGCATTCCGTCTCTGCCGCAAGGGCAGACGTTTGCGAAATCTGTCTGTGTGTAAATAGAACTGATAAGCGAGCTTTGTTTCGTTCTTATGAACCCACTAAACAGCTAATTCACGGTGAATATTAGTCAATCACTGTGCTCTACTGTTTANAACAAAATATTAAGGAAGCTTATCAATCACACTGTACACTGTGTACACTCTGATGANCTACGACAGTGNGACGATTTNCNCGCGNGCATCCTTCAGGCAACGATCCGGAGTGATGCTTCCAGTGAGTTCTCGTTGCCGGGATAGTGCCGGAAN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2025#0 -----CCGGGGTAAG--AGTATAACACCTCTACGAACGATAGATAGTCCATCGTACTAAA 53 consensus_2025#1 AATTCCCCAGGTAAATCACAACAATATGTCTACAAT---TCTGCTCTCTATTACGCTAT- 56 ** ***** * * ** * ***** * * ** ** *** consensus_2025#0 CAAAACAAAAAACAAGAAAAACATTCA----TTCACGCTAAACTGTTCACTCTTGGCTGC 109 consensus_2025#1 CAGAATAGGTGTTTAGGAAGCCGGTGGACAGTGCACAGACAAACGAACTCTCTCGGCCTG 116 ** ** * ** ** * * * *** ** * * **** *** consensus_2025#0 CGTTCGTCATCTTTGCCGCAAGTGGCGGTGCGAGATGTT-TGTTTTTATAGAGCTCCTTC 168 consensus_2025#1 TGTCGGACGGTAGCATCACA-GCATCGGTGCCAGGGGTAGTAAGCTTTGCGCATTCCGTC 175 ** * * * ** * ****** ** ** * ** * *** ** consensus_2025#0 GGCTCCCTAGTCTCGGTGTGTTTTGCCAGCAAAATATGTACGTTAGTGTGTCGATTTCGG 228 consensus_2025#1 TCTGCCGCAAGGGCAG-ACGTTT-----GCGAAATCTGTCTGTGTGTAAATAGAACT-GA 228 ** * * * **** ** **** *** ** ** * ** * * consensus_2025#0 TTAGTGTCGCGTATCACTTAGTATCACTGCGGCTGTGCGTCTTTCCGCTAGTGGTTTTTT 288 consensus_2025#1 TAAGCGAGCTTTGTTTCGTTCTTATGAACCCACTAAACAGCTAATTCACGGTGAATATTA 288 * ** * * * * * * * ** * ** *** * ** consensus_2025#0 TTTG--CCCCATCATTTACTTGTTAAAAGCAATTGTTACGACTTGATGTATAATAAGGCT 346 consensus_2025#1 GTCAATCACTGTGCTCTACTGTTTANAACAAAATATTAAGGAAGCTTAT-CAATCACACT 347 * * * * * **** *** ** ** * *** * * * *** * ** consensus_2025#0 ACACAGGGTGCTTTAGAAATCGGTTAACTCGGACTGTTTGTTGCGTGTGTATGTGTGTGT 406 consensus_2025#1 GTACACTGTG---TACACTCTGATGANCTACGACAGTGNGACG-ATTTNCNCGCGNGCAT 403 *** *** ** * * * * ** *** ** * * * * * * * * consensus_2025#0 GTGTGTGTGTGCGTGTGCGTGTGCGTGCGTGTGTGCATTTAGTTTTTAGGAGTCACTTTC 466 consensus_2025#1 CCTTCAGGCAACGATCCGGAGTG-ATGCTTCCAGTGAGTTCTCGTTGCCGGGATAGTGCC 462 * * ** * *** *** * * ** ** * * * * * consensus_2025#0 GGGAGCGGGAGTAGGACATGAGGAAATTGAATGGAAATCAGATCTCGTATCAATCGAAAC 526 consensus_2025#1 GGAAN------------------------------------------------------- 467 ** * consensus_2025#0 CATTGCATAGATTCGCAACCAAAGTACAGAAACACACTCGCCTGCATGTACACAATAGAA 586 consensus_2025#1 ------------------------------------------------------------ consensus_2025#0 GAACAAGAAGAAGAAGAAGTAGAAGAAATACACAAACAAATATGTCCTACAATTCCTGCT 646 consensus_2025#1 ------------------------------------------------------------ consensus_2025#0 CTCTATTACGCTATCAGAATAGGTGTTTAGGAAGTCGGTGGACTGTGC 694 consensus_2025#1 ------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||