These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_210#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 692 fasta sequence [GCGGTACGAGGCGCCCCGGAAGCATTAAATCTAAGTCTGTGCGGATAGGATGTTGGAAGTAGAAAGAGTGCGATGCGTGCGTAACAATATCAATCAATTTAGATAGGCACTCGTTTTGGTGAAAAAAAAAGAAAAACCGACCGGTTTCAGTAGCATAAAGTAGCTTTCAGTCGCATTTTCGCTTCCTTCTCGTTAGTAGTACCCAAGTGCAGGGTAGAAAATAAAAATCCTACGAATTTTAAACCCCATACTAGACAGGTATGAAGAAGANAAAGAGTGCCTTTTACAATAGCGGTTTCAAGGATCAGAAATCCTGGGGTCTTTAACGGANTTTNTCTCTCTTATACAATAATTTCATGCCTTTTNCCCTTGTTACCGNGCGCTTGAAGGGAANANCGGGTTGGGGNCACGCACCCACTTNAACATTGNACACTACACGACACTTTNTTTACAACACCACAACAAAACCGNACACAGGGACACAAAGATTTAACCACCTCACCAGGCTATGTACCNCACCCACAATACACCCAAACNGATTCCCGACTCCCAAAATTTTTCTATNACCCAAACACATTAATACTCTTCCTATTATATCTACATCCACTACACTCCATACACACTTACTATTAAACCACCACTNTTAACACACACACCCCACTCTCTCATANTNCCCCACNAAACANCCTTNC] [+] EMBL AL696097 [GCGGTACGAGGCGCCCCGGAAGCATTAAATCTAAGTCTGTGCGGATAGGATGTTGGAAGTAGAAAGAGTGCGATGCGTGCGTAACAATATCAATCAATTTAGATAGGCACTCGTTTTGGTGAAAAAAAAAGAAAAACCGACCGGTTTCAGTAGCATAAAGTAGCTTTCAGTCGCATTTTCGCTTCCTTCTCGTTAGTAGTACCCAAGTGCAGGGTAGAAAATAAAAATCCTACGAATTTTAAACCCCATACTAGACAGGTATGAAGAAGANAAAGAGTGCCTTTTACAATAGCGGTTTCAAGGATCAGAAATCCTGGGGTCTTTAACGGANTTTNTCTCTCTTATACAATAATTTCATGCCTTTTNCCCTTGTTACCGNGCGCTTGAAGGGAANANCGGGTTGGGGNCACGCACCCACTTNAACATTGNACACTACACGACACTTTNTTTACAACACCACAACAAAACCGNACACAGGGACACAAAGATTTAACCACCTCACCAGGCTATGTACCNCACCCACAATACACCCAAACNGATTCCCGACTCCCAAAATTTTTCTATNACCCAAACACATTAATACTCTTCCTATTATATCTACATCCACTACACTCCATACACACTTACTATTAAACCACCACTNTTAACACACACACCCCACTCTCTCATANTNCCCCACNAAACANCCTTNC] consensusID : consensus_210#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence [TCGAAGGCAAGAATTCGCGCACGAGTGTAGCTGTAACCCGAGGCCGAACACAACGGCACCGCACCCACCACAACCTGCCACCGAGGAGGACAACTCAGCGTCAACGGAGGAGAGTCGGGCTCGAACGAAGGCTCCAACGCATCGCCAGACTCTACCGAGGCTCCGTCGGCCGAATCGGGCGCGGAATCGAACGAGGCTAGCACCGGTCCACCCGCTAAGCACCCGGATCGGGCGAGATTTGTGTGTCCGGCTGCCGGTCGCGTTCGCCAATCCGACCGACTGTCACAAATTACTACGTCTGCGTTCTGGCGTGCCCGTTCGGACTGTACAGTCTCGGAGCAGAACATGCTATGGCCCGGGTACNGCGGTAACAAATCCGGTTCGCTTGGNAAACGGCTAGNGCACAGGGGCGACCAAGAGCGGTNTTTAG] [+] EMBL BX468010 [TCGAAGGCAAGAATTCGCGCACGAGTGTAGCTGTAACCCGAGGCCGAACACAACGGCACCGCACCCACCACAACCTGCCACCGAGGAGGACAACTCAGCGTCAACGGAGGAGAGTCGGGCTCGAACGAAGGCTCCAACGCATCGCCAGACTCTACCGAGGCTCCGTCGGCCGAATCGGGCGCGGAATCGAACGAGGCTAGCACCGGTCCACCCGCTAAGCACCCGGATCGGGCGAGATTTGTGTGTCCGGCTGCCGGTCGCGTTCGCCAATCCGACCGACTGTCACAAATTACTACGTCTGCGTTCTGGCGTGCCCGTTCGGACTGTACAGTCTCGGAGCAGAACATGCTATGGCCCGGGTACNGCGGTAACAAATCCGGTTCGCTTGGNAAACGGCTAGNGCACAGGGGCGACCAAGAGCGGTNTTTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_210#0 GCGGTACGAGGCGCCCCGGAAGCATTAAATCTAAGTCTGTGCGGATAGGATGTTGGAAGT 60 consensus_210#1 ---------------TCGAAGGCAAGAATTCG-----CGCACGAGTGTAGCTGTAACCCG 40 ** * *** ** ** * ** * * consensus_210#0 AGAAAGAGTGCGATGCGTGCGTAACAATATCAATCAATTTAGATAGGCACTCGTTTTGGT 120 consensus_210#1 AGGCCGAACACAACGGCACCGCACCCACCACAACCTGCC-ACCGAGGAGGACAACTCAGC 99 ** ** * * * ** * * * *** * * *** * * * consensus_210#0 GAAAAAAAAAGAAAAACCGACCGGTTTCAGTAGCATAAAGTAGCTTTCAGTCGCATTTTC 180 consensus_210#1 GTCAACGGAGGAGAGTCGGGCTCGAACGAAGGCTCCAACGCATCGCCAGACTCTACCGAG 159 * ** * ** * * * * * * ** * * * * consensus_210#0 GCTTCCTTCTCGTTAGTAGTACCCAAGTGCAGGGTAGAAAATAAAAATCCTACGAATTTT 240 consensus_210#1 GCTCC------GTCGGCCGAATC-GGGCGCGGAATCGAA--CGAGGCTAGCACCGGT--- 207 *** * ** * * * * * ** * * *** * * ** * consensus_210#0 AAACCCCATACTAGACAGGTATGAAGAAGANAAAGAGTGCCTTTTACAATAGCGGTTTCA 300 consensus_210#1 ---CCACCCGCTAAGCA--CCCGGATCGGGCGAGATTTGTGTGTCCGGCTGCCGGTCGC- 261 ** * *** ** * * * * ** * * * **** * consensus_210#0 AGGATCAGAAATCCTGGGGTCTTTAACGGANTTTNTCTCTCTTATACAATAATTTCATGC 360 consensus_210#1 --GTTCGCCAATCCGACCGACTGTCACAAATTACTACGTCTGCGTTC-----TGGCGTGC 314 * ** ***** * ** * ** * * * * * * * *** consensus_210#0 CTTTTNCCCTTGTTACCGNGCGCTTGAAGGGAANANCGGGTTGGGGNCACGCACCCACTT 420 consensus_210#1 CCGTTCGG------ACTGTACAGTCTCGGAGCAGAACATGCTATGGCCCGGGTACNGCGG 368 * ** ** * * * * * * * * * * ** * * * * consensus_210#0 NAACATTGNACACTACACGACACTTTNTTTACAACACCACAACAAAACCGNACACAGGGA 480 consensus_210#1 TAACAA--------ATCCGGTTCGCTTGGNAAACGGCTAGNGCACAGGGGCGACCAAGAG 420 **** * ** * * * * * * ** * * ** * consensus_210#0 CACAAAGATTTAACCACCTCACCAGGCTATGTACCNCACCCACAATACACCCAAACNGAT 540 consensus_210#1 CG---GTNTTTAG----------------------------------------------- 430 * **** consensus_210#0 TCCCGACTCCCAAAATTTTTCTATNACCCAAACACATTAATACTCTTCCTATTATATCTA 600 consensus_210#1 ------------------------------------------------------------ consensus_210#0 CATCCACTACACTCCATACACACTTACTATTAAACCACCACTNTTAACACACACACCCCA 660 consensus_210#1 ------------------------------------------------------------ consensus_210#0 CTCTCTCATANTNCCCCACNAAACANCCTTNC 692 consensus_210#1 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||