These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2307#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 623 fasta sequence [GCAGAATCCGCACGATGTAAAACGATACACACACGCACACAAAACGTATGTGCCCCCTTCCCTTCGATATAAACTATGCAACAACAACAAAAAAACTCCGAAAACAAATACCCAAAAAAATGGTAAAAACCAACGTCGGGACGATCCTGCGCCTACGATCAACGTTCAAACAACACACACACACACACCTAAAGGACCCGACCCTGGAGTGTGACAAGAAGTGTGCGAACAAGGGCGTCTGCAACGAGGACAAGATCTGCCAGTGTCCGGAGGGCTACATGGGCCAGTACTGCCAGACGGCGCTCTGCTACCCGCAGTGCATGAACTGGCGGCAACTGTACCGCACCGGGCACCTGCTCCTGTCCGCCCGGCTACCAGGGTCCTGGCACTGCGAGGGAGGCATCTGTGCCGAAAAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTACTACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGCCGGGGAGTGAACAAGTGCCGGTGCAAAGCCGGGCCTGAGCGGTGACCACTGCCAGATCGGGCGCCGGCAGCGCTCGAACTGGCAAGCGAC] [+] EMBL BX466159 [GCAGAATCCGCACGATGTAAAACGATACACACACGCACACAAAACGTATGTGCCCCCTTCCCTTCGATATAAACTATGCAACAACAACAAAAAAACTCCGAAAACAAATACCCAAAAAAATGGTAAAAACCAACGTCGGGACGATCCTGCGCCTACGATCAACGTTCAAACAACACACACACACACACCTAAAGGACCCGACCCTGGAGTGTGACAAGAAGTGTGCGAACAAGGGCGTCTGCAACGAGGACAAGATCTGCCAGTGTCCGGAGGGCTACATGGGCCAGTACTGCCAGACGGCGCTCTGCTACCCGCAGTGCATGAACTGGCGGCAACTGTACCGCACCGGGCACCTGCTCCTGTCCGCCCGGCTACCAGGGTCCTGGCACTGCGAGGGAGGCATCTGTGCCGAAAAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTACTACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGCCGGGGAGTGAACAAGTGCCGGTGCAAAGCCGGGCCTGAGCGGTGACCACTGCCAGATCGGGCGCCGGCAGCGCTCGAACTGGCAAGCGAC] consensusID : consensus_2307#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence [CCGGAAAGATCTTCTACTCTAACATCTTCTTCGCAAGGACCCGACCCGGAGTGTGACAAGAAGTGTGCGAACAAGGGCGTCTGCAACGAGGACAAGATCTGCCAGTGTCCGGAGGGCTACATGGGCCAGTACTGCCAGACGGCGCTCTGCTACCCGCAGTGCATGAACGGCGGCAACTGTACCGCACCGGGCACCTGCTCCTGTCCGCCCGGCTACCAGGGCCGGCACTGCGAGGGAGGTAATGTACCCAAACTGGCACACACACTCTCTCTCTCTCTCTCTCTCTCTCTGGACGCATCCGTCACAAACCTACCCATTTCCCAAACCCTCTTTCTTCGTCAGGCATCTGTGCCGAAAAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTACTACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGCCGGGGAGTGAACAAGTGCCGGGTGCAAGCCGGGCCTGAGCG] [+] EMBL BM652671 [CCGGAAAGATCTTCTACTCTAACATCTTCTTCGCAAGGACCCGACCCGGAGTGTGACAAGAAGTGTGCGAACAAGGGCGTCTGCAACGAGGACAAGATCTGCCAGTGTCCGGAGGGCTACATGGGCCAGTACTGCCAGACGGCGCTCTGCTACCCGCAGTGCATGAACGGCGGCAACTGTACCGCACCGGGCACCTGCTCCTGTCCGCCCGGCTACCAGGGCCGGCACTGCGAGGGAGGTAATGTACCCAAACTGGCACACACACTCTCTCTCTCTCTCTCTCTCTCTCTGGACGCATCCGTCACAAACCTACCCATTTCCCAAACCCTCTTTCTTCGTCAGGCATCTGTGCCGAAAAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTACTACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGCCGGGGAGTGAACAAGTGCCGGGTGCAAGCCGGGCCTGAGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2307#0 GCAGAATCCGCACGATGTAAAACGATACACACACGCACACAAAACGTATGTGCCCCCTTC 60 consensus_2307#1 -------------------------------------------CCGGAAAGATCTTCTAC 17 ** * * ** * consensus_2307#0 CCTTCGATATAAACTATGCAACAACAACAAAAAAACTCCGAAAACAAATACCCAAAAAAA 120 consensus_2307#1 TCT--AACATCTTCTTCGCAAGGACCCGACCCGGAGTGTGACAAGAAGTGTGCGAACAA- 74 ** * ** ** **** ** * * * ** ** ** * * ** ** consensus_2307#0 TGGTAAAAACCAACGTCGGGACGATCCTGCGCCTACGATCAACGTTCAAACAACACACAC 180 consensus_2307#1 -GGGCGTCTGCAACGAGGACAAGATCT----------GCCAGTGTCCGGAGGGC-----T 118 ** ***** * * **** ** ** * * * consensus_2307#0 ACACACACCTAAAGGACCCGACCCTGGAGTGTGACAAGAAGTGTGCGAACAAGGGCGTCT 240 consensus_2307#1 ACATGGGCCAGTACTGCCAGACGGCGCTCTGCTACCCGCAGTGCATGAACGGCGGCAACT 178 *** ** * ** *** * ** ** * **** **** *** ** consensus_2307#0 GCAACGAGGACAAGATCTGCCAGTGTCCGGAGGGCTACATGGGCCAGTACTGCCAGAC-G 299 consensus_2307#1 GTACCGCACCGGGCACCTGCTCCTGTCCGCCCGGCTACCAGGGCCGGCACTGCGAGGGAG 238 * * ** * **** ****** ****** ***** * ***** ** * consensus_2307#0 GCGCTCTGCT---ACCCGCA-GTGCATGAACTGGCGGCAACTGTACCGCACCGG--GCAC 353 consensus_2307#1 GTAATGTACCCAAACTGGCACACACACTCTCTCTCTCTCTCTCTCTCTCTCTGGACGCAT 298 * * * * ** *** ** ** * ** * * * * ** *** consensus_2307#0 CTGCTCCTGTCCGCCCGGCTACCAGGGTCCTGGCACTGCGAGGGAGGCATCTGTGCCGAA 413 consensus_2307#1 CCGTCACAAACCTACCCATTTCCCAAACCCTCTTTCTTCGTC--AGGCATCTGTGCCGAA 356 * * * ** ** * ** *** ** ** **************** consensus_2307#0 AAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTAC 473 consensus_2307#1 AAGTGTCAGAACGGGGGCAAATGCATCCAGAAGGACAAGTGCGAATGCACCAAGGGCTAC 416 ************************************************************ consensus_2307#0 TACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGC 533 consensus_2307#1 TACGGGCTGCGCTGCGAGTACTCGAAGTGCGTCATACCGTGCCTGCACGATGGCAAGTGC 476 ************************************************************ consensus_2307#0 CGGGGAGTGAACAAGTGCCGGTGCAAAGCCGGGCCTGAGCGGTGACCACTGCCAGATCGG 593 consensus_2307#1 CGGGGAGTGAACAAGTGCCGGGTGCAAGCCGGGCCTGAGCG------------------- 517 ********************* **************** consensus_2307#0 GCGCCGGCAGCGCTCGAACTGGCAAGCGAC 623 consensus_2307#1 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||