These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2389#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence [AAGAATCGCCACGAGGTCATCACCAAGCGACCGGTACTGGCTCCAGGATATGGGGCCCGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGGGCGTACTGATCGATTACATGCTTCAAACGCACCCATGCTACGACCAGCTGCTTAAAGAGCACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCCTAGATGAGTTGGCAAAAAAGCAGGGTGAAAGTTCCGTTCACCGACTAACGATCGATCTGCACGTTTGGCCCGACTTTCACGGCAATCGGTCGCCTCTGGCCGACCCTAATCTGAAGGGTATGATATCGGGTCTAACGATGACGAAGGATGTGCAAAACTTGGCGCTTATTTATCTTGCTCTCATGCAAGCACTAGCGTACGGAACACGACACATACTGCAG] [+] EMBL AL929761 [AAGAATCGCCACGAGGTCATCACCAAGCGACCGGTACTGGCTCCAGGATATGGGGCCCGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGGGCGTACTGATCGATTACATGCTTCAAACGCACCCATGCTACGACCAGCTGCTTAAAGAGCACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCCTAGATGAGTTGGCAAAAAAGCAGGGTGAAAGTTCCGTTCACCGACTAACGATCGATCTGCACGTTTGGCCCGACTTTCACGGCAATCGGTCGCCTCTGGCCGACCCTAATCTGAAGGGTATGATATCGGGTCTAACGATGACGAAGGATGTGCAAAACTTGGCGCTTATTTATCTTGCTCTCATGCAAGCACTAGCGTACGGAACACGACACATACTGCAG] consensusID : consensus_2389#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 224 fasta sequence [ATCCTCGTGCCATATGAGTCTTACCAAGCGACCGGTACTGGCTCCAGGGATATGGGGCCCGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGGGCGTACTGATCGATTACATGCTTCAAACGCACCCATACTACGACCAGCTGCTTAAAGAGCACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCC] [+] EMBL BX606891 [ATCCTCGTGCCATATGAGTCTTACCAAGCGACCGGTACTGGCTCCAGGGATATGGGGCCCGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGGGCGTACTGATCGATTACATGCTTCAAACGCACCCATACTACGACCAGCTGCTTAAAGAGCACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2389#0 AAGAATCG--CCACGAGGTCATCACCAAGCGACCGGTACTGGCTCCAGG-ATATGGGGCC 57 consensus_2389#1 -ATCCTCGTGCCATATGAGTCTTACCAAGCGACCGGTACTGGCTCCAGGGATATGGGGCC 59 * *** *** * * ************************** ********** consensus_2389#0 CGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGG 117 consensus_2389#1 CGTACAAGCATGCAATCATCCCGGACCTGTACCTGAACGAGGCAGGCCAAAGTGCGACGG 119 ************************************************************ consensus_2389#0 GCGTACTGATCGATTACATGCTTCAAACGCACCCATGCTACGACCAGCTGCTTAAAGAGC 177 consensus_2389#1 GCGTACTGATCGATTACATGCTTCAAACGCACCCATACTACGACCAGCTGCTTAAAGAGC 179 ************************************ *********************** consensus_2389#0 ACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCCTAGATGAGTTGGCAA 237 consensus_2389#1 ACGGCGGTTCCAATGGGAAGATTTATGCCTTTCTCAACACATTCC--------------- 224 ********************************************* consensus_2389#0 AAAAGCAGGGTGAAAGTTCCGTTCACCGACTAACGATCGATCTGCACGTTTGGCCCGACT 297 consensus_2389#1 ------------------------------------------------------------ consensus_2389#0 TTCACGGCAATCGGTCGCCTCTGGCCGACCCTAATCTGAAGGGTATGATATCGGGTCTAA 357 consensus_2389#1 ------------------------------------------------------------ consensus_2389#0 CGATGACGAAGGATGTGCAAAACTTGGCGCTTATTTATCTTGCTCTCATGCAAGCACTAG 417 consensus_2389#1 ------------------------------------------------------------ consensus_2389#0 CGTACGGAACACGACACATACTGCAG 443 consensus_2389#1 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||