cluster # 2457

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Anopheles gambiae
cluster # 2457 cluster # 2457 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2457#0 length = 675 sequences # 1

consensus_2457#1 length = 597 sequences # 1

consensusID : consensus_2457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAAAGCATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGTCTGCTGGAAGACAAGGATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGATCTAATCAGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGCAACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAACGATCTGCTGATGAATCTTATCACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGTAAGGGATGACACACTTTCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCATCCGAAGGCCAAGCAGCTTTGTATGAAGAAATCACCTTGGCGGAAGTGCAGTCCATCGACAGTTCCGAACACTACGACGAGGAACCACCGAAAGTATTTGTGACGCAAAAAGCCGGTAGTTCACAAATAGCCGGTGATACGTTGTTACAGCTGCAACATCAATCAACCGTTCCTGTGGAGCAGTCTATGGAAGAGACGGTACAAGTGCAGCTGGATTATGAGCATGAAACGATG]

[+] EMBL BM595995             [CCGCCCACGCGTCCGCCCACGCGTCCGAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAAAGCATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGTCTGCTGGAAGACAAGGATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGATCTAATCAGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGCAACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAACGATCTGCTGATGAATCTTATCACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGTAAGGGATGACACACTTTCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCATCCGAAGGCCAAGCAGCTTTGTATGAAGAAATCACCTTGGCGGAAGTGCAGTCCATCGACAGTTCCGAACACTACGACGAGGAACCACCGAAAGTATTTGTGACGCAAAAAGCCGGTAGTTCACAAATAGCCGGTGATACGTTGTTACAGCTGCAACATCAATCAACCGTTCCTGTGGAGCAGTCTATGGAAGAGACGGTACAAGTGCAGCTGGATTATGAGCATGAAACGATG]




>consensus_2457#0
CCGCCCACGCGTCCGCCCACGCGTCCGAATGGCCATATCCGTCTTGCTTTGCTAATGTTA
TTTAACTAGAAGGGATAGTAAAGCATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGC
TGCTGTCTGCTGGAAGACAAGGATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAA
ATGAAAATCAGCGATCTAATCAGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCC
TTTTCCAAGCACATCTGTGGCAACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTG
TTGCGCTGCCGCAAAACCAACGATCTGCTGATGAATCTTATCACAAGCGATGCACAGGAA
GATGCGGACGCGCTGGTGGTAAGGGATGACACACTTTCCGAGACGTACCCGGAGGATGAT
GTATCTTACGTGGTTGAGGCATCCGAAGGCCAAGCAGCTTTGTATGAAGAAATCACCTTG
GCGGAAGTGCAGTCCATCGACAGTTCCGAACACTACGACGAGGAACCACCGAAAGTATTT
GTGACGCAAAAAGCCGGTAGTTCACAAATAGCCGGTGATACGTTGTTACAGCTGCAACAT
CAATCAACCGTTCCTGTGGAGCAGTCTATGGAAGAGACGGTACAAGTGCAGCTGGATTAT
GAGCATGAAACGATG

consensusID : consensus_2457#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 597
fasta sequence

                              [CCGCGGACGCGTGGGCTGTCACAACAACCACATCACAAACCGCATCAAAGCATAAACAAACGCCGTGTCGACGCCGCGCCAGAACGTGTTTTTTTTTTTTTTTAACTAAAATAGTTAATTTGTGCTAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAAAACATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGCCTGCTGGAAGACAAGGATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGACCTAATCAGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGCAACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAACGATCTGCTGATGAATCTTATTACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGGAAGGAATGACACACTTCCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCATCCCGAAAGCCAAGCAGCTTTGTATGAAAAAATCACCCTTGGCGGAAGAGCAATCCA]

[+] EMBL BM610504             [CCGCGGACGCGTGGGCTGTCACAACAACCACATCACAAACCGCATCAAAGCATAAACAAACGCCGTGTCGACGCCGCGCCAGAACGTGTTTTTTTTTTTTTTTAACTAAAATAGTTAATTTGTGCTAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAAAACATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGCCTGCTGGAAGACAAGGATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGACCTAATCAGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGCAACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAACGATCTGCTGATGAATCTTATTACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGGAAGGAATGACACACTTCCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCATCCCGAAAGCCAAGCAGCTTTGTATGAAAAAATCACCCTTGGCGGAAGAGCAATCCA]




>consensus_2457#1
CCGCGGACGCGTGGGCTGTCACAACAACCACATCACAAACCGCATCAAAGCATAAACAAA
CGCCGTGTCGACGCCGCGCCAGAACGTGTTTTTTTTTTTTTTTAACTAAAATAGTTAATT
TGTGCTAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAA
AACATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGCCTGCTGGAAGACAAG
GATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGACCTAATC
AGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGC
AACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAAC
GATCTGCTGATGAATCTTATTACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGGA
AGGAATGACACACTTCCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCA
TCCCGAAAGCCAAGCAGCTTTGTATGAAAAAATCACCCTTGGCGGAAGAGCAATCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2457#0      ------------------------------------------------------------
consensus_2457#1      CCGCGGACGCGTGGGCTGTCACAACAACCACATCACAAACCGCATCAAAGCATAAACAAA 60
                                                                                  

consensus_2457#0      --------------------------------------CCGCCCAC-GCGTCCGCCCACG 21
consensus_2457#1      CGCCGTGTCGACGCCGCGCCAGAACGTGTTTTTTTTTTTTTTTAACTAAAATAGTTAATT 120
                                                                  **       *   *  

consensus_2457#0      CGTCCGAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAA 81
consensus_2457#1      TGTGCTAATGGCCATATCCGTCTTGCTTTGCTAATGTTATTTAACTAGAAGGGATAGTAA 180
                       ** * ******************************************************

consensus_2457#0      AGCATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGTCTGCTGGAAGACAAG 141
consensus_2457#1      AACATGGAAGGAGAAGTGATACTACCTGCCGCCTGTCGCTGCTGCCTGCTGGAAGACAAG 240
                      * ****************************************** ***************

consensus_2457#0      GATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGATCTAATC 201
consensus_2457#1      GATATGGTCTATGTGTTCGACATTTTGGATGAATTTGAAATGAAAATCAGCGACCTAATC 300
                      ***************************************************** ******

consensus_2457#0      AGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGC 261
consensus_2457#1      AGTCGAAATGGAGCAATAGAGATACAAGAACGTGACGCCTTTTCCAAGCACATCTGTGGC 360
                      ************************************************************

consensus_2457#0      AACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAAC 321
consensus_2457#1      AACTGTCTAAACGATCTGGCAATAGCTGAGCGTTTTGTGTTGCGCTGCCGCAAAACCAAC 420
                      ************************************************************

consensus_2457#0      GATCTGCTGATGAATCTTATCACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGTA 381
consensus_2457#1      GATCTGCTGATGAATCTTATTACAAGCGATGCACAGGAAGATGCGGACGCGCTGGTGGGA 480
                      ******************** ************************************* *

consensus_2457#0      AGGGATGACACACTTTCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCA 441
consensus_2457#1      AGGAATGACACACTTCCCGAGACGTACCCGGAGGATGATGTATCTTACGTGGTTGAGGCA 540
                      *** *********** ********************************************

consensus_2457#0      TCC-GAAGGCCAAGCAGCTTTGTATGAAGAAATCACC-TTGGCGGAAGTGCAGTCCATCG 499
consensus_2457#1      TCCCGAAAGCCAAGCAGCTTTGTATGAAAAAATCACCCTTGGCGGAAGAGCAATCCA--- 597
                      *** *** ******************** ******** ********** *** ****   

consensus_2457#0      ACAGTTCCGAACACTACGACGAGGAACCACCGAAAGTATTTGTGACGCAAAAAGCCGGTA 559
consensus_2457#1      ------------------------------------------------------------
                                                                                  

consensus_2457#0      GTTCACAAATAGCCGGTGATACGTTGTTACAGCTGCAACATCAATCAACCGTTCCTGTGG 619
consensus_2457#1      ------------------------------------------------------------
                                                                                  

consensus_2457#0      AGCAGTCTATGGAAGAGACGGTACAAGTGCAGCTGGATTATGAGCATGAAACGATG 675
consensus_2457#1      --------------------------------------------------------