These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_246#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence [CCGTTCTTTTCATACTTAACTGATCTGCATAATATGTTAATATTTGCTACCCATATAGTTATTAACATCGCTTAAAAATCTAGTGCTTTGTTATCGTTTGGTGTGAACTGTTACAAGTCTATGCTAGTGGTAGTACTGTTGCGCCATCGTATACTATCCTCCAAAACCACACATTCACACAAACACACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTACAAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAGGTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCTGTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAAGCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCATAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCATATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACATATACAAACAAACACCTATATATATATATATATATATACACATACCATATTCAAAGCGTGGATAGAAGATGAAAGGACGAAACGCGGCCACG] [+] EMBL BM654377 [CCGTTCTTTTCATACTTAACTGATCTGCATAATATGTTAATATTTGCTACCCATATAGTTATTAACATCGCTTAAAAATCTAGTGCTTTGTTATCGTTTGGTGTGAACTGTTACAAGTCTATGCTAGTGGTAGTACTGTTGCGCCATCGTATACTATCCTCCAAAACCACACATTCACACAAACACACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTACAAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAGGTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCTGTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAAGCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCATAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCATATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACATATACAAACAAACACCTATATATATATATATATATATACACATACCATATTCAAAGCGTGGATAGAAGATGAAAGGACGAAACGCGGCCACG] consensusID : consensus_246#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence [CCGCCCACGCGTCCGCACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTACAAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAGGTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCTGTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAAGCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCATAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCATATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACATATACAAACAAACACCTATATATATATATATATATATACACATACAATATCAAAGCGTGGATAGAAGATGAAAGGACGAAACGCGGCCACGTGGCTAGGACAGAGCAAACAACGAAAACGAAACACTAACATCACACAAAACTGTACATGTGAGCGTGTGTGTGTGTGTGTATGTGTGTATGTCCCATCTATAGACTTTTTAGACTGATTTGCCCGCCCCGCTCTGGTGTGTGGTGAGACCAAA] [+] EMBL BM626989 [CCGCCCACGCGTCCGCACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTACAAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAGGTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCTGTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAAGCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCATAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCATATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACATATACAAACAAACACCTATATATATATATATATATATACACATACAATATCAAAGCGTGGATAGAAGATGAAAGGACGAAACGCGGCCACGTGGCTAGGACAGAGCAAACAACGAAAACGAAACACTAACATCACACAAAACTGTACATGTGAGCGTGTGTGTGTGTGTGTATGTGTGTATGTCCCATCTATAGACTTTTTAGACTGATTTGCCCGCCCCGCTCTGGTGTGTGGTGAGACCAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_246#0 CCGTTCTTTTCATACTTAACTGATCTGCATAATATGTTAATATTTGCTACCCATATAGTT 60 consensus_246#1 ------------------------------------------------------------ consensus_246#0 ATTAACATCGCTTAAAAATCTAGTGCTTTGTTATCGTTTGGTGTGAACTGTTACAAGTCT 120 consensus_246#1 ------------------------------------------------------------ consensus_246#0 ATGCTAGTGGTAGTACTGTTGCGCCATCGTATACTATCCTCCAAAACCACACATTCACAC 180 consensus_246#1 --------------------------------------------------CCGCCCACGC 10 * *** * consensus_246#0 AAACACACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTAC 240 consensus_246#1 GTCCGCACACACACAAACACACCTTTACAAACTAATCGTGGTGTACAAATTATGGTGTAC 70 * ******************************************************* consensus_246#0 AAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAG 300 consensus_246#1 AAAAACAAAAACCCCAACAAATCAAACCAGCAACAGTTTCAATTCAGTACAGTCGAAAAG 130 ************************************************************ consensus_246#0 GTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCT 360 consensus_246#1 GTGTTTCGGTTGGAGCGCTTTAGACTGCTGCGGCTTGTGTGAATCGAAACTTACCACCCT 190 ************************************************************ consensus_246#0 GTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAA 420 consensus_246#1 GTGCGTAGTACTACTACGCCCAGTGGAAGTGAAGCCCAGACCTGATCGGCGTAATACAAA 250 ************************************************************ consensus_246#0 GCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCA 480 consensus_246#1 GCATAAAAGAAGAAGGATAAAGATTACTATCACGTTTATATTTTAATCGCATCAAATGCA 310 ************************************************************ consensus_246#0 TAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCAT 540 consensus_246#1 TAACCGAGTACTTGAAAACAAACACGGATGGTGGAGCGACCAACCTCCGATGGATATCAT 370 ************************************************************ consensus_246#0 ATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACAT 600 consensus_246#1 ATTCGAGCCAGTTATTGAAAGAGAAAGCAACCCTATAAATGAATACTAATATATATACAT 430 ************************************************************ consensus_246#0 ATACAAACAAACACCTATATATATATATATATATATACACATACCATATTCAAAGCGTGG 660 consensus_246#1 ATACAAACAAACACCTATATATATATATATATATATACACATACAATAT-CAAAGCGTGG 489 ******************************************** **** ********** consensus_246#0 ATAGAAGATGAAAGGACGAAACGCGGCCACG----------------------------- 691 consensus_246#1 ATAGAAGATGAAAGGACGAAACGCGGCCACGTGGCTAGGACAGAGCAAACAACGAAAACG 549 ******************************* consensus_246#0 ------------------------------------------------------------ consensus_246#1 AAACACTAACATCACACAAAACTGTACATGTGAGCGTGTGTGTGTGTGTGTATGTGTGTA 609 consensus_246#0 ------------------------------------------------------------ consensus_246#1 TGTCCCATCTATAGACTTTTTAGACTGATTTGCCCGCCCCGCTCTGGTGTGTGGTGAGAC 669 consensus_246#0 ---- consensus_246#1 CAAA 673 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||