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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2499#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence
[CAAGAATTGCCCGAGGTGTGTTACAGGTCATCGCGCGAAGTACGCAAAATAGTCCACAGTCCATCACTACACCGTCCGCGCACTGATCAGTGGATAGCGTCTANCACTTGGTTGCTATATATGGTACGGGTTACGGGACTTTAGTTTCTAGATTCGCCATAGAAGAGTTGCATAAGCGAACTTGAATTTGATTGCCATATTCAAAAACTTCTTGTTGTTCAACAACCAAAACCGGGAACNGGTCGGCCCGGTATGGCCGTAAGCCCCGAAAAAGGGCGTCCAAANAGTTCCGGTTGGTTCCCGGTTGGGGAAAGGTTAACCTAATTTCCCCGGAATTCCAANGGTTTTTATTACCCAAAAACTGGTTTCAACAACCTTGGTTCCAGACATTTGGGGAACACTTACCGACCACACCTCTGCGGTGTACGGGGGGTCTAATTTTCCCTTATNGTAACCATTTTTACTCCGCCCCGGGGAAAGGTTTTCCCGGACAACTCGCAATTTCGGCACACGTTTTTGGAAAAAAGGCTTTAAAACCGGGGCCAATTTCTCGGGGGAACCCAAATTTATTTTAACCCTGGCCCTCACAGAGTTTGGTGATTTAACCCNCACAAGGTAGTNACAACACTATTGGCGTCATATATTGGGGGCCAGCCCCGTTGTTTTCCCAACGAAAACAACGAGTTACCCCGNTTGCTGCAAACTTATTTATCAAAAGGGCCTTTATGGGCGCTTCATGGGAGGGTTATTACCCCCCTTTTTGTCCCAAATTTTGGGAACTTTTTCCCAAAACCGGGAAAATATANCTCCTTATCCCCCGGGAGAATTTTAAATTTTCACAACGGGGAACTTTAACGGCGCACAAAAATACCTGGGGGGCCCCCTTCTTCAACAGGCTGGGGCGACACAGGGCAACTTTTTTCCCCGACAGANAAGAGGCCCCCCCGTTATTAAAAAATAAGACCACTATGCCNGAANATGGGGTGAAACACCCACAACAGGGGNGTTTCTGTCCAACAANACANACGAGTTTTTCCCCGACAACATTTTTATTTGCCCCAACAGCGTTTTTATAAATAAGCAGCCCGCAAAAAACCGTAGAACGTGCTCGCTCCCCCGAAAATACGGGTGGGGNGCACAACTGGGGNGCCACTCTTTGACCANACCAGGATTTTNAGACGATTTTCCACCCAGGGTGTACCCCAGGTGGATGNTGAACACCCACAACGTGCGGCGTCTAAACGTATTTCTTGTTCACACCTTTTGTTNAAACGCGGTTTTACACTACACAAACGGGTGGGGTGGTTTACTATAACAGAGGAGCCCGATGGAGCCCANCAATCATATGGCGAAACGCCCCCNCANAATAATAGACCAGAAAACCTCCCCCGGGGNTCACTATTTTNNATGTCCACCCCCCGGTGGGTGGAACTTTGTGCACCCCATTTNGGTGGGTCGGCCCCCACAAAAAGCAGACCACGA]
[+] EMBL AL930753 [CAAGAATTGCCCGAGGTGTGTTACAGGTCATCGCGCGAAGTACGCAAAATAGTCCACAGTCCATCACTACACCGTCCGCGCACTGATCAGTGGATAGCGTCTANCACTTGGTTGCTATATATGGTACGGGTTACGGGACTTTAGTTTCTAGATTCGCCATAGAAGAGTTGCATAAGCGAACTTGAATTTGATTGCCATATTCAAAAACTTCTTGTTGTTCAACAACCAAAACCGGGAACNGGTCGGCCCGGTATGGCCGTAAGCCCCGAAAAAGGGCGTCCAAANAGTTCCGGTTGGTTCCCGGTTGGGGAAAGGTTAACCTAATTTCCCCGGAATTCCAANGGTTTTTATTACCCAAAAACTGGTTTCAACAACCTTGGTTCCAGACATTTGGGGAACACTTACCGACCACACCTCTGCGGTGTACGGGGGGTCTAATTTTCCCTTATNGTAACCATTTTTACTCCGCCCCGGGGAAAGGTTTTCCCGGACAACTCGCAATTTCGGCACACGTTTTTGGAAAAAAGGCTTTAAAACCGGGGCCAATTTCTCGGGGGAACCCAAATTTATTTTAACCCTGGCCCTCACAGAGTTTGGTGATTTAACCCNCACAAGGTAGTNACAACACTATTGGCGTCATATATTGGGGGCCAGCCCCGTTGTTTTCCCAACGAAAACAACGAGTTACCCCGNTTGCTGCAAACTTATTTATCAAAAGGGCCTTTATGGGCGCTTCATGGGAGGGTTATTACCCCCCTTTTTGTCCCAAATTTTGGGAACTTTTTCCCAAAACCGGGAAAATATANCTCCTTATCCCCCGGGAGAATTTTAAATTTTCACAACGGGGAACTTTAACGGCGCACAAAAATACCTGGGGGGCCCCCTTCTTCAACAGGCTGGGGCGACACAGGGCAACTTTTTTCCCCGACAGANAAGAGGCCCCCCCGTTATTAAAAAATAAGACCACTATGCCNGAANATGGGGTGAAACACCCACAACAGGGGNGTTTCTGTCCAACAANACANACGAGTTTTTCCCCGACAACATTTTTATTTGCCCCAACAGCGTTTTTATAAATAAGCAGCCCGCAAAAAACCGTAGAACGTGCTCGCTCCCCCGAAAATACGGGTGGGGNGCACAACTGGGGNGCCACTCTTTGACCANACCAGGATTTTNAGACGATTTTCCACCCAGGGTGTACCCCAGGTGGATGNTGAACACCCACAACGTGCGGCGTCTAAACGTATTTCTTGTTCACACCTTTTGTTNAAACGCGGTTTTACACTACACAAACGGGTGGGGTGGTTTACTATAACAGAGGAGCCCGATGGAGCCCANCAATCATATGGCGAAACGCCCCCNCANAATAATAGACCAGAAAACCTCCCCCGGGGNTCACTATTTTNNATGTCCACCCCCCGGTGGGTGGAACTTTGTGCACCCCATTTNGGTGGGTCGGCCCCCACAAAAAGCAGACCACGA]
consensusID : consensus_2499#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 715 fasta sequence
[CCGTTAAAAAGTATCTTTCTGCTTTAGACCGTTTACTGCTAGCAAGACGTAGATTAGGGTGTTTACAACTATCCTTCATGAACACAAAAACACAACGAAACATCGCAGACGGAGTTAGAAGATCACAAAGAAACGCAAAATGCGTCAAACTTCAGGCAACAGGGTACAGGGTCATCGCGCGAAGTACGCAAAATAGTCCACCAGTCCATCACTACACCGTCCGCGCACTGATCAGGGATAGCGTCTAGCACTGGTTGCTTTTGTTGGTTAGGGATTAGTTTTAGATCGCATAGAAGAGTGCATAGGAATGAATTTGATGCCATATCAAATTTGTTGTTCAAACAAAACCCGGAAAGTCGCCGTTGCGTAGCCGAAAAGGCTCAAAGTTTGTGTCCGTGGGAGTACTATTCCGATCAGTTTTTCCACACTGTCACACTGTCAGATGGAAATACGAAATGTTGGTATCTTACTTCCCCGAGTTCGAACGATGAGTGAAGCTACGCATCGGACATTTTACGCTAGTGTTACAGTTAATGCTTTGCGCGTTCAAAATCGTTATTAGCTGCTGGTTCCTTCATGATCACGATCCTCCGATATAGGATAGCAACGCTAGGAGATCAACCCTAACACAGACAGTTAAATCATTCACTACCACACCCCAAGGAGGATTAATATCCGCCGGACAGTATTTATTAGTAAAGGGTAGCGCAACACC]
[+] EMBL BM631724 [CCGTTAAAAAGTATCTTTCTGCTTTAGACCGTTTACTGCTAGCAAGACGTAGATTAGGGTGTTTACAACTATCCTTCATGAACACAAAAACACAACGAAACATCGCAGACGGAGTTAGAAGATCACAAAGAAACGCAAAATGCGTCAAACTTCAGGCAACAGGGTACAGGGTCATCGCGCGAAGTACGCAAAATAGTCCACCAGTCCATCACTACACCGTCCGCGCACTGATCAGGGATAGCGTCTAGCACTGGTTGCTTTTGTTGGTTAGGGATTAGTTTTAGATCGCATAGAAGAGTGCATAGGAATGAATTTGATGCCATATCAAATTTGTTGTTCAAACAAAACCCGGAAAGTCGCCGTTGCGTAGCCGAAAAGGCTCAAAGTTTGTGTCCGTGGGAGTACTATTCCGATCAGTTTTTCCACACTGTCACACTGTCAGATGGAAATACGAAATGTTGGTATCTTACTTCCCCGAGTTCGAACGATGAGTGAAGCTACGCATCGGACATTTTACGCTAGTGTTACAGTTAATGCTTTGCGCGTTCAAAATCGTTATTAGCTGCTGGTTCCTTCATGATCACGATCCTCCGATATAGGATAGCAACGCTAGGAGATCAACCCTAACACAGACAGTTAAATCATTCACTACCACACCCCAAGGAGGATTAATATCCGCCGGACAGTATTTATTAGTAAAGGGTAGCGCAACACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2499#0 CAAGAATTGCCCGAGGTGTGTTACAGGTCATCGCGCGAAGTACGCAAAATAGTCCACAGT 60
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 CCATCACTACACCGTCCGCGCACTGATCAGTGGATAGCGTCTANCACTTGGTTGCTATAT 120
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 ATGGTACGGGTTACGGGACTTTAGTTTCTAGATTCGCCATAGAAGAGTTGCATAAGCGAA 180
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 CTTGAATTTGATTGCCATATTCAAAAACTTCTTGTTGTTCAACAACCAAAACCGGGAACN 240
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 GGTCGGCCCGGTATGGCCGTAAGCCCCGAAAAAGGGCGTCCAAANAGTTCCGGTTGGTTC 300
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 CCGGTTGGGGAAAGGTTAACCTAATTTCCCCGGAATTCCAANGGTTTTTATTACCCAAAA 360
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 ACTGGTTTCAACAACCTTGGTTCCAGACATTTGGGGAACACTTACCGACCACACCTCTGC 420
consensus_2499#1 -----------------------------------------------------------C 1
*
consensus_2499#0 GGTGTACGGGGGGTCTAATTTTCCCTTATNGTAACCATTTTTACTCCGCCCCGGGGAAAG 480
consensus_2499#1 CGT-TAAAAAGTATCT--TTCTGCTTTAGACCGTTTACTGCTAGCAAGACGTAGATTAGG 58
** ** * *** ** * * *** * * ** * * * * *
consensus_2499#0 GTTTTCCCGGACAACTCGCAATTTCGGCACACGTTTTTGGAAAAAAGGCTTTAAAACCGG 540
consensus_2499#1 GTGTTT----ACAACTATCC-TTCATGAACACAAAAACACAACGAAACATCGCAGACGGA 113
** ** ****** * ** * **** ** ** * * ** *
consensus_2499#0 GGCC-AATTTCTCGGGGGAACCCAAATTTATTTTAACCCTGGCCCTCACAGAGTTTGGTG 599
consensus_2499#1 GTTAGAAGATCACAAAGAAACGCAAAATGCGTCAAACTTCAGGCAACAGGGTACAGGGTC 173
* ** ** * * *** **** * * *** * * ** * ***
consensus_2499#0 ATTTAACCCNCACAAGGTAGTNACAACACTATTGGCGTCATATATTGGGGGCCAGCCCCG 659
consensus_2499#1 AT------CGCGCGAAGTACGCAAAATAGT-------CCACCAGTCCATCACTACACCGT 220
** * * * * *** * ** * * ** * * * **
consensus_2499#0 TTGTTTTCCCAACGAAAACAACGAGTTACCCCGNTTGCTGCAAACTTATTTATCAAAAGG 719
consensus_2499#1 CCGCGCACTGATCAGGGATAGCGTCTAGCACTGGTTGCT-----TTTGTTGGTTAGGGAT 275
* * * * * * ** * * * * ***** ** ** * *
consensus_2499#0 GCCTTTATGGGCGCTTCATGGGAGGGT-TATTACCCCCCTTTTTGTCCCAAATTTTGGGA 778
consensus_2499#1 TAGTTTTAGATCG---CATAGAAGAGTGCATAGGAATGAATTTGATGCCATATCAAATTT 332
*** * ** *** * ** ** ** *** * *** **
consensus_2499#0 ACTTTTTCC-CAAAACCGGGAAAATATANCTCCTTATCCCCCGGGAGAATTTTAAATTTT 837
consensus_2499#1 GTTGTTCAAACAAAACCCGGAAAGT---CGCCGTTGCGTAGCCGAAAAGGCTCAAAGTTT 389
* ** ******* ***** * * ** * * * * * *** ***
consensus_2499#0 CACAACGGGGAACTTTAACGGCGCACAAAAATACCTGGGGGGCCCCCTTCTTCAACAGGC 897
consensus_2499#1 GTGTCCGTGGGAGTACTATTCCG-ATCAGTTTTTCCACACTGTCACACTGTCAGATGGAA 448
** ** * * * ** * * * * * * * * * * *
consensus_2499#0 TGGGGCGACACAGGGCAACTTTTTTCCCCGACAGANAAGAGGCCCCCCCGTTATTAAAAA 957
consensus_2499#1 ATACGAAATGTTGG-TATCTTACTTCCCCGAGTTCGAA----------CGATGAGTGAAG 497
* * ** * *** ******** ** ** * **
consensus_2499#0 ATAAGACCACTATGCCNGAANATGGGGTGAAACACCCACAACAGGGGNGTTTCTGTCCAA 1017
consensus_2499#1 CTACGCATCGGACATTTTACGCTAGTGTTACA-GTTAATGCTTTGCGCGTTCAAAATCGT 556
** * * * * * ** * * * * * *** *
consensus_2499#0 CAANACANACGAGTTTTTCCCCGACAACATTTTTATTTGCCCCAACAGCGTTTTTATAAA 1077
consensus_2499#1 TATTAGCTGCTGGTTCCTTCATGATCACGATCCTCCGATATAGGATAGCAACGCTAGGA- 615
* * * *** * * ** ** * * * *** ** *
consensus_2499#0 TAAGCAGCCCGCAAAAAACCGTAGAACGTGCTCGCTCCCCCGAAAATACGGGTGGGGNGC 1137
consensus_2499#1 -GATCAACCCTAACACAGACAGTTAAATCATTCACTACC---ACACCCCAAGGAGGATTA 671
* ** *** * * * * ** ** ** ** * * * * **
consensus_2499#0 ACAACTGGGGNGCCACTCTTTGACCANACCAGGATTTTNAGACGATTTTCCACCCAGGGT 1197
consensus_2499#1 ATATCCGCCGGACAGTATTT--ATTAGTAAAGGGTAGCGCAACACC-------------- 715
* * * * * * ** * * *** * **
consensus_2499#0 GTACCCCAGGTGGATGNTGAACACCCACAACGTGCGGCGTCTAAACGTATTTCTTGTTCA 1257
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 CACCTTTTGTTNAAACGCGGTTTTACACTACACAAACGGGTGGGGTGGTTTACTATAACA 1317
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 GAGGAGCCCGATGGAGCCCANCAATCATATGGCGAAACGCCCCCNCANAATAATAGACCA 1377
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 GAAAACCTCCCCCGGGGNTCACTATTTTNNATGTCCACCCCCCGGTGGGTGGAACTTTGT 1437
consensus_2499#1 ------------------------------------------------------------
consensus_2499#0 GCACCCCATTTNGGTGGGTCGGCCCCCACAAAAAGCAGACCACGA 1482
consensus_2499#1 ---------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||